ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5904:51065

Extra

PDB:
ATOM 1 O3' G A 903 130.276 -20.863 246.110 1.00 34.90 O
ATOM 2 P U A 904 130.867 -20.876 247.615 1.00 37.06 P
ATOM 3 OP1 U A 904 130.103 -19.937 248.428 1.00 36.96 O
ATOM 4 OP2 U A 904 132.298 -20.681 247.476 1.00 36.90 O
ATOM 5 O5' U A 904 130.564 -22.341 248.080 1.00 37.30 O
ATOM 6 C5' U A 904 131.046 -23.437 247.335 1.00 37.46 C
ATOM 7 C4' U A 904 130.321 -24.701 247.667 1.00 37.73 C
ATOM 8 O4' U A 904 129.010 -24.644 247.103 1.00 37.87 O
ATOM 9 C3' U A 904 130.931 -25.948 247.084 1.00 37.91 C
ATOM 10 O3' U A 904 131.933 -26.484 247.901 1.00 37.89 O
ATOM 11 C2' U A 904 129.755 -26.885 246.895 1.00 38.20 C
ATOM 12 O2' U A 904 129.488 -27.586 248.099 1.00 38.31 O
ATOM 13 C1' U A 904 128.615 -25.908 246.621 1.00 38.15 C
ATOM 14 N1 U A 904 128.302 -25.796 245.157 1.00 38.23 N
ATOM 15 C2 U A 904 127.694 -26.828 244.536 1.00 38.52 C
ATOM 16 O2 U A 904 127.386 -27.827 245.134 1.00 38.71 O
ATOM 17 N3 U A 904 127.475 -26.676 243.206 1.00 38.59 N
ATOM 18 C4 U A 904 127.755 -25.621 242.411 1.00 38.42 C
ATOM 19 O4 U A 904 127.441 -25.627 241.222 1.00 38.53 O
ATOM 20 C5 U A 904 128.388 -24.572 243.102 1.00 38.12 C
ATOM 21 C6 U A 904 128.633 -24.700 244.398 1.00 38.05 C
ATOM 22 P U A 905 133.193 -27.165 247.227 1.00 34.48 P
ATOM 23 OP1 U A 905 134.244 -27.271 248.288 1.00 34.37 O
ATOM 24 OP2 U A 905 133.489 -26.395 245.995 1.00 34.37 O
ATOM 25 O5' U A 905 132.654 -28.600 246.815 1.00 34.81 O
TER

ATOM 1 O3' U B1064 126.395 -18.736 238.802 1.00 36.47 O
ATOM 2 P G B1065 127.841 -18.516 238.217 1.00 34.34 P
ATOM 3 OP1 G B1065 128.338 -17.262 238.750 1.00 34.07 O
ATOM 4 OP2 G B1065 127.784 -18.685 236.780 1.00 34.50 O
ATOM 5 O5' G B1065 128.624 -19.695 238.851 1.00 34.38 O
ATOM 6 C5' G B1065 128.663 -19.835 240.257 1.00 34.29 C
ATOM 7 C4' G B1065 129.172 -21.177 240.600 1.00 34.42 C
ATOM 8 O4' G B1065 128.233 -22.158 240.112 1.00 34.71 O
ATOM 9 C3' G B1065 130.504 -21.524 239.951 1.00 34.39 C
ATOM 10 O3' G B1065 131.605 -21.178 240.813 1.00 34.17 O
ATOM 11 C2' G B1065 130.393 -23.026 239.711 1.00 34.67 C
ATOM 12 O2' G B1065 130.826 -23.710 240.862 1.00 34.65 O
ATOM 13 C1' G B1065 128.893 -23.263 239.594 1.00 34.86 C
ATOM 14 N9 G B1065 128.414 -23.513 238.219 1.00 35.07 N
ATOM 15 C8 G B1065 127.334 -24.310 237.980 1.00 35.34 C
ATOM 16 N7 G B1065 127.003 -24.408 236.724 1.00 35.51 N
ATOM 17 C5 G B1065 127.923 -23.650 236.077 1.00 35.34 C
ATOM 18 C6 G B1065 128.073 -23.395 234.690 1.00 35.43 C
ATOM 19 O6 G B1065 127.401 -23.817 233.733 1.00 35.68 O
ATOM 20 N1 G B1065 129.122 -22.540 234.401 1.00 35.21 N
ATOM 21 C2 G B1065 129.917 -22.044 235.364 1.00 34.95 C
ATOM 22 N2 G B1065 130.885 -21.280 234.905 1.00 34.78 N
ATOM 23 N3 G B1065 129.799 -22.267 236.657 1.00 34.87 N
ATOM 24 C4 G B1065 128.782 -23.073 236.970 1.00 35.07 C
ATOM 25 P G B1066 132.727 -20.074 240.426 1.00 33.20 P
ATOM 26 OP1 G B1066 133.239 -20.400 239.076 1.00 33.32 O
ATOM 27 OP2 G B1066 133.636 -20.032 241.503 1.00 33.04 O
ATOM 28 O5' G B1066 131.969 -18.694 240.365 1.00 33.07 O
TER

Atoms:
C4: (127.755,-25.621,242.411)
N3: (127.475,-26.676,243.206)
OP1: (130.103,-19.937,248.428)
OP2: (132.298,-20.681,247.476)
C2: (127.694,-26.828,244.536)
C1': (128.615,-25.908,246.621)
C3': (130.931,-25.948,247.084)
O5': (130.564,-22.341,248.080)
O4': (129.010,-24.644,247.103)
C5': (131.046,-23.437,247.335)
P: (130.867,-20.876,247.615)
C4': (130.321,-24.701,247.667)
C2': (129.755,-26.885,246.895)
O2': (129.488,-27.586,248.099)
N1: (128.302,-25.796,245.157)
O4: (127.441,-25.627,241.222)
O2: (127.386,-27.827,245.134)
C6: (128.633,-24.700,244.398)
C5: (128.388,-24.572,243.102)
O3': (131.933,-26.484,247.901)
OP1: (128.338,-17.262,238.750)
OP2: (127.784,-18.685,236.780)
C3': (130.504,-21.524,239.951)
C1': (128.893,-23.263,239.594)
C5': (128.663,-19.835,240.257)
O6: (127.401,-23.817,233.733)
O4': (128.233,-22.158,240.112)
C8: (127.334,-24.310,237.980)
C2: (129.917,-22.044,235.364)
C6: (128.073,-23.395,234.690)
C5: (127.923,-23.650,236.077)
C4: (128.782,-23.073,236.970)
P: (127.841,-18.516,238.217)
C4': (129.172,-21.177,240.600)
C2': (130.393,-23.026,239.711)
O2': (130.826,-23.710,240.862)
N1: (129.122,-22.540,234.401)
N2: (130.885,-21.280,234.905)
N3: (129.799,-22.267,236.657)
N7: (127.003,-24.408,236.724)
N9: (128.414,-23.513,238.219)
O5': (128.624,-19.695,238.851)
O3': (131.605,-21.178,240.813)
Image (generated by PyMOL):
PyMOL image
show in jmol