ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2312:21112

Extra

PDB:
ATOM 1 O3' A A 311 -45.532 29.153 88.293 1.00 59.29 O
ATOM 2 P U A 312 -45.127 27.652 87.854 1.00 59.45 P
ATOM 3 OP1 U A 312 -46.361 26.957 87.391 1.00 59.78 O
ATOM 4 OP2 U A 312 -44.368 27.067 88.989 1.00 59.43 O
ATOM 5 O5' U A 312 -44.165 27.901 86.621 1.00 59.08 O
ATOM 6 C5' U A 312 -42.827 28.286 86.823 1.00 58.77 C
ATOM 7 C4' U A 312 -42.087 28.359 85.527 1.00 58.50 C
ATOM 8 O4' U A 312 -41.619 27.034 85.180 1.00 58.48 O
ATOM 9 C3' U A 312 -42.905 28.867 84.342 1.00 58.57 C
ATOM 10 O3' U A 312 -42.114 29.788 83.579 1.00 58.31 O
ATOM 11 C2' U A 312 -43.189 27.589 83.532 1.00 58.69 C
ATOM 12 O2' U A 312 -43.320 27.792 82.142 1.00 58.66 O
ATOM 13 C1' U A 312 -41.975 26.727 83.856 1.00 58.51 C
ATOM 14 N1 U A 312 -42.197 25.283 83.797 1.00 58.70 N
ATOM 15 C2 U A 312 -41.427 24.622 82.899 1.00 58.57 C
ATOM 16 O2 U A 312 -40.702 25.167 82.148 1.00 58.34 O
ATOM 17 N3 U A 312 -41.526 23.288 82.858 1.00 58.75 N
ATOM 18 C4 U A 312 -42.318 22.537 83.659 1.00 59.05 C
ATOM 19 O4 U A 312 -42.258 21.337 83.450 1.00 59.20 O
ATOM 20 C5 U A 312 -43.094 23.247 84.631 1.00 59.18 C
ATOM 21 C6 U A 312 -42.987 24.579 84.676 1.00 58.99 C
ATOM 22 P C A 313 -42.224 31.375 83.849 1.00 50.91 P
ATOM 23 OP1 C A 313 -43.531 31.837 83.268 1.00 51.18 O
ATOM 24 OP2 C A 313 -40.991 31.979 83.359 1.00 50.61 O
ATOM 25 O5' C A 313 -42.299 31.494 85.448 1.00 51.02 O
TER

ATOM 1 O3' U B1111 -47.680 21.706 88.767 1.00 53.27 O
ATOM 2 P G B1112 -48.802 20.862 87.957 1.00 58.15 P
ATOM 3 OP1 G B1112 -50.035 21.706 87.830 1.00 58.47 O
ATOM 4 OP2 G B1112 -48.919 19.548 88.617 1.00 58.14 O
ATOM 5 O5' G B1112 -48.131 20.681 86.530 1.00 57.93 O
ATOM 6 C5' G B1112 -47.348 21.713 85.960 1.00 57.81 C
ATOM 7 C4' G B1112 -46.562 21.203 84.787 1.00 57.59 C
ATOM 8 O4' G B1112 -45.376 20.531 85.258 1.00 57.34 O
ATOM 9 C3' G B1112 -47.248 20.154 83.914 1.00 57.63 C
ATOM 10 O3' G B1112 -48.145 20.721 83.006 1.00 57.85 O
ATOM 11 C2' G B1112 -46.066 19.530 83.234 1.00 57.35 C
ATOM 12 O2' G B1112 -45.557 20.416 82.257 1.00 57.31 O
ATOM 13 C1' G B1112 -45.079 19.455 84.404 1.00 57.20 C
ATOM 14 N9 G B1112 -45.283 18.211 85.144 1.00 57.19 N
ATOM 15 C8 G B1112 -46.086 17.952 86.213 1.00 57.37 C
ATOM 16 N7 G B1112 -46.086 16.695 86.527 1.00 57.34 N
ATOM 17 C5 G B1112 -45.256 16.112 85.592 1.00 57.13 C
ATOM 18 C6 G B1112 -44.855 14.779 85.423 1.00 57.02 C
ATOM 19 O6 G B1112 -45.175 13.796 86.087 1.00 57.09 O
ATOM 20 N1 G B1112 -44.013 14.647 84.342 1.00 56.82 N
ATOM 21 C2 G B1112 -43.595 15.657 83.527 1.00 56.76 C
ATOM 22 N2 G B1112 -42.770 15.322 82.531 1.00 56.59 N
ATOM 23 N3 G B1112 -43.950 16.906 83.672 1.00 56.86 N
ATOM 24 C4 G B1112 -44.770 17.039 84.721 1.00 57.04 C
ATOM 25 P A B1113 -49.245 19.838 82.251 1.00 55.74 P
ATOM 26 OP1 A B1113 -50.139 20.802 81.593 1.00 56.02 O
ATOM 27 OP2 A B1113 -49.804 18.892 83.223 1.00 55.81 O
ATOM 28 O5' A B1113 -48.425 19.038 81.158 1.00 55.51 O
TER

Atoms:
C4: (-42.318,22.537,83.659)
N3: (-41.526,23.288,82.858)
OP1: (-46.361,26.957,87.391)
OP2: (-44.368,27.067,88.989)
C2: (-41.427,24.622,82.899)
C1': (-41.975,26.727,83.856)
C3': (-42.905,28.867,84.342)
O5': (-44.165,27.901,86.621)
O4': (-41.619,27.034,85.180)
C5': (-42.827,28.286,86.823)
P: (-45.127,27.652,87.854)
C4': (-42.087,28.359,85.527)
C2': (-43.189,27.589,83.532)
O2': (-43.320,27.792,82.142)
N1: (-42.197,25.283,83.797)
O4: (-42.258,21.337,83.450)
O2: (-40.702,25.167,82.148)
C6: (-42.987,24.579,84.676)
C5: (-43.094,23.247,84.631)
O3': (-42.114,29.788,83.579)
OP1: (-50.035,21.706,87.830)
OP2: (-48.919,19.548,88.617)
C3': (-47.248,20.154,83.914)
C1': (-45.079,19.455,84.404)
C5': (-47.348,21.713,85.960)
O6: (-45.175,13.796,86.087)
O4': (-45.376,20.531,85.258)
C8: (-46.086,17.952,86.213)
C2: (-43.595,15.657,83.527)
C6: (-44.855,14.779,85.423)
C5: (-45.256,16.112,85.592)
C4: (-44.770,17.039,84.721)
P: (-48.802,20.862,87.957)
C4': (-46.562,21.203,84.787)
C2': (-46.066,19.530,83.234)
O2': (-45.557,20.416,82.257)
N1: (-44.013,14.647,84.342)
N2: (-42.770,15.322,82.531)
N3: (-43.950,16.906,83.672)
N7: (-46.086,16.695,86.527)
N9: (-45.283,18.211,85.144)
O5': (-48.131,20.681,86.530)
O3': (-48.145,20.721,83.006)
Image (generated by PyMOL):
PyMOL image
show in jmol