Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0253:0252
Extra
PDB:
ATOM 1 O3' G A 252 91.447 119.844 3.430 1.00 49.35 O
ATOM 2 P U A 253 90.134 119.608 4.318 1.00 48.29 P
ATOM 3 OP1 U A 253 90.447 120.145 5.662 1.00 49.65 O
ATOM 4 OP2 U A 253 89.725 118.190 4.174 1.00 47.68 O
ATOM 5 O5' U A 253 89.028 120.531 3.638 1.00 47.80 O
ATOM 6 C5' U A 253 88.862 121.909 4.030 1.00 47.84 C
ATOM 7 C4' U A 253 88.451 122.739 2.839 1.00 48.93 C
ATOM 8 O4' U A 253 89.578 122.914 1.937 1.00 48.92 O
ATOM 9 C3' U A 253 87.379 122.093 1.983 1.00 49.06 C
ATOM 10 O3' U A 253 86.085 122.324 2.515 1.00 49.29 O
ATOM 11 C2' U A 253 87.599 122.747 0.626 1.00 48.38 C
ATOM 12 O2' U A 253 87.014 124.033 0.531 1.00 48.43 O
ATOM 13 C1' U A 253 89.128 122.854 0.593 1.00 47.35 C
ATOM 14 N1 U A 253 89.777 121.704 -0.055 1.00 47.48 N
ATOM 15 C2 U A 253 89.588 121.533 -1.419 1.00 47.53 C
ATOM 16 O2 U A 253 88.927 122.300 -2.104 1.00 50.16 O
ATOM 17 N3 U A 253 90.201 120.429 -1.953 1.00 46.20 N
ATOM 18 C4 U A 253 90.964 119.498 -1.287 1.00 47.54 C
ATOM 19 O4 U A 253 91.378 118.512 -1.898 1.00 48.23 O
ATOM 20 C5 U A 253 91.129 119.751 0.114 1.00 47.37 C
ATOM 21 C6 U A 253 90.546 120.816 0.667 1.00 46.14 C
ATOM 22 P G A 254 85.009 121.139 2.514 1.00 49.99 P
ATOM 23 OP1 G A 254 83.710 121.733 2.925 1.00 49.11 O
ATOM 24 OP2 G A 254 85.579 119.990 3.275 1.00 48.44 O
ATOM 25 O5' G A 254 84.894 120.711 0.983 1.00 51.32 O
TER
ATOM 1 O3' U B 251 96.731 118.945 6.925 1.00 48.38 O
ATOM 2 P G B 252 95.466 118.199 6.275 1.00 48.83 P
ATOM 3 OP1 G B 252 94.242 118.544 7.037 1.00 49.17 O
ATOM 4 OP2 G B 252 95.818 116.775 6.059 1.00 47.66 O
ATOM 5 O5' G B 252 95.345 118.890 4.853 1.00 49.45 O
ATOM 6 C5' G B 252 94.875 120.236 4.730 1.00 48.91 C
ATOM 7 C4' G B 252 93.821 120.295 3.664 1.00 49.30 C
ATOM 8 O4' G B 252 94.430 119.937 2.393 1.00 50.28 O
ATOM 9 C3' G B 252 92.676 119.314 3.876 1.00 49.15 C
ATOM 10 O3' G B 252 91.447 119.844 3.430 1.00 49.35 O
ATOM 11 C2' G B 252 93.106 118.081 3.084 1.00 49.75 C
ATOM 12 O2' G B 252 92.022 117.321 2.580 1.00 48.11 O
ATOM 13 C1' G B 252 93.947 118.677 1.953 1.00 49.54 C
ATOM 14 N9 G B 252 95.101 117.828 1.648 1.00 49.74 N
ATOM 15 C8 G B 252 95.883 117.142 2.551 1.00 48.50 C
ATOM 16 N7 G B 252 96.813 116.424 1.986 1.00 48.33 N
ATOM 17 C5 G B 252 96.650 116.653 0.626 1.00 50.01 C
ATOM 18 C6 G B 252 97.368 116.132 -0.494 1.00 50.56 C
ATOM 19 O6 G B 252 98.313 115.322 -0.506 1.00 49.36 O
ATOM 20 N1 G B 252 96.882 116.646 -1.692 1.00 50.64 N
ATOM 21 C2 G B 252 95.846 117.541 -1.807 1.00 50.23 C
ATOM 22 N2 G B 252 95.550 117.940 -3.051 1.00 50.18 N
ATOM 23 N3 G B 252 95.158 118.015 -0.780 1.00 50.32 N
ATOM 24 C4 G B 252 95.609 117.533 0.399 1.00 50.22 C
ATOM 25 P U B 253 90.134 119.608 4.318 1.00 48.29 P
ATOM 26 OP1 U B 253 90.447 120.145 5.662 1.00 49.65 O
ATOM 27 OP2 U B 253 89.725 118.190 4.174 1.00 47.68 O
ATOM 28 O5' U B 253 89.028 120.531 3.638 1.00 47.80 O
TER
ATOM 2 P U A 253 90.134 119.608 4.318 1.00 48.29 P
ATOM 3 OP1 U A 253 90.447 120.145 5.662 1.00 49.65 O
ATOM 4 OP2 U A 253 89.725 118.190 4.174 1.00 47.68 O
ATOM 5 O5' U A 253 89.028 120.531 3.638 1.00 47.80 O
ATOM 6 C5' U A 253 88.862 121.909 4.030 1.00 47.84 C
ATOM 7 C4' U A 253 88.451 122.739 2.839 1.00 48.93 C
ATOM 8 O4' U A 253 89.578 122.914 1.937 1.00 48.92 O
ATOM 9 C3' U A 253 87.379 122.093 1.983 1.00 49.06 C
ATOM 10 O3' U A 253 86.085 122.324 2.515 1.00 49.29 O
ATOM 11 C2' U A 253 87.599 122.747 0.626 1.00 48.38 C
ATOM 12 O2' U A 253 87.014 124.033 0.531 1.00 48.43 O
ATOM 13 C1' U A 253 89.128 122.854 0.593 1.00 47.35 C
ATOM 14 N1 U A 253 89.777 121.704 -0.055 1.00 47.48 N
ATOM 15 C2 U A 253 89.588 121.533 -1.419 1.00 47.53 C
ATOM 16 O2 U A 253 88.927 122.300 -2.104 1.00 50.16 O
ATOM 17 N3 U A 253 90.201 120.429 -1.953 1.00 46.20 N
ATOM 18 C4 U A 253 90.964 119.498 -1.287 1.00 47.54 C
ATOM 19 O4 U A 253 91.378 118.512 -1.898 1.00 48.23 O
ATOM 20 C5 U A 253 91.129 119.751 0.114 1.00 47.37 C
ATOM 21 C6 U A 253 90.546 120.816 0.667 1.00 46.14 C
ATOM 22 P G A 254 85.009 121.139 2.514 1.00 49.99 P
ATOM 23 OP1 G A 254 83.710 121.733 2.925 1.00 49.11 O
ATOM 24 OP2 G A 254 85.579 119.990 3.275 1.00 48.44 O
ATOM 25 O5' G A 254 84.894 120.711 0.983 1.00 51.32 O
TER
ATOM 1 O3' U B 251 96.731 118.945 6.925 1.00 48.38 O
ATOM 2 P G B 252 95.466 118.199 6.275 1.00 48.83 P
ATOM 3 OP1 G B 252 94.242 118.544 7.037 1.00 49.17 O
ATOM 4 OP2 G B 252 95.818 116.775 6.059 1.00 47.66 O
ATOM 5 O5' G B 252 95.345 118.890 4.853 1.00 49.45 O
ATOM 6 C5' G B 252 94.875 120.236 4.730 1.00 48.91 C
ATOM 7 C4' G B 252 93.821 120.295 3.664 1.00 49.30 C
ATOM 8 O4' G B 252 94.430 119.937 2.393 1.00 50.28 O
ATOM 9 C3' G B 252 92.676 119.314 3.876 1.00 49.15 C
ATOM 10 O3' G B 252 91.447 119.844 3.430 1.00 49.35 O
ATOM 11 C2' G B 252 93.106 118.081 3.084 1.00 49.75 C
ATOM 12 O2' G B 252 92.022 117.321 2.580 1.00 48.11 O
ATOM 13 C1' G B 252 93.947 118.677 1.953 1.00 49.54 C
ATOM 14 N9 G B 252 95.101 117.828 1.648 1.00 49.74 N
ATOM 15 C8 G B 252 95.883 117.142 2.551 1.00 48.50 C
ATOM 16 N7 G B 252 96.813 116.424 1.986 1.00 48.33 N
ATOM 17 C5 G B 252 96.650 116.653 0.626 1.00 50.01 C
ATOM 18 C6 G B 252 97.368 116.132 -0.494 1.00 50.56 C
ATOM 19 O6 G B 252 98.313 115.322 -0.506 1.00 49.36 O
ATOM 20 N1 G B 252 96.882 116.646 -1.692 1.00 50.64 N
ATOM 21 C2 G B 252 95.846 117.541 -1.807 1.00 50.23 C
ATOM 22 N2 G B 252 95.550 117.940 -3.051 1.00 50.18 N
ATOM 23 N3 G B 252 95.158 118.015 -0.780 1.00 50.32 N
ATOM 24 C4 G B 252 95.609 117.533 0.399 1.00 50.22 C
ATOM 25 P U B 253 90.134 119.608 4.318 1.00 48.29 P
ATOM 26 OP1 U B 253 90.447 120.145 5.662 1.00 49.65 O
ATOM 27 OP2 U B 253 89.725 118.190 4.174 1.00 47.68 O
ATOM 28 O5' U B 253 89.028 120.531 3.638 1.00 47.80 O
TER
Atoms:
C4: (90.964,119.498,-1.287)
N3: (90.201,120.429,-1.953)
OP1: (90.447,120.145,5.662)
OP2: (89.725,118.190,4.174)
C2: (89.588,121.533,-1.419)
C1': (89.128,122.854,0.593)
C3': (87.379,122.093,1.983)
O5': (89.028,120.531,3.638)
O4': (89.578,122.914,1.937)
C5': (88.862,121.909,4.030)
P: (90.134,119.608,4.318)
C4': (88.451,122.739,2.839)
C2': (87.599,122.747,0.626)
O2': (87.014,124.033,0.531)
N1: (89.777,121.704,-0.055)
O4: (91.378,118.512,-1.898)
O2: (88.927,122.300,-2.104)
C6: (90.546,120.816,0.667)
C5: (91.129,119.751,0.114)
O3': (86.085,122.324,2.515)
N3: (90.201,120.429,-1.953)
OP1: (90.447,120.145,5.662)
OP2: (89.725,118.190,4.174)
C2: (89.588,121.533,-1.419)
C1': (89.128,122.854,0.593)
C3': (87.379,122.093,1.983)
O5': (89.028,120.531,3.638)
O4': (89.578,122.914,1.937)
C5': (88.862,121.909,4.030)
P: (90.134,119.608,4.318)
C4': (88.451,122.739,2.839)
C2': (87.599,122.747,0.626)
O2': (87.014,124.033,0.531)
N1: (89.777,121.704,-0.055)
O4: (91.378,118.512,-1.898)
O2: (88.927,122.300,-2.104)
C6: (90.546,120.816,0.667)
C5: (91.129,119.751,0.114)
O3': (86.085,122.324,2.515)
OP1: (94.242,118.544,7.037)
OP2: (95.818,116.775,6.059)
C3': (92.676,119.314,3.876)
C1': (93.947,118.677,1.953)
C5': (94.875,120.236,4.730)
O6: (98.313,115.322,-0.506)
O4': (94.430,119.937,2.393)
C8: (95.883,117.142,2.551)
C2: (95.846,117.541,-1.807)
C6: (97.368,116.132,-0.494)
C5: (96.650,116.653,0.626)
C4: (95.609,117.533,0.399)
P: (95.466,118.199,6.275)
C4': (93.821,120.295,3.664)
C2': (93.106,118.081,3.084)
O2': (92.022,117.321,2.580)
N1: (96.882,116.646,-1.692)
N2: (95.550,117.940,-3.051)
N3: (95.158,118.015,-0.780)
N7: (96.813,116.424,1.986)
N9: (95.101,117.828,1.648)
O5': (95.345,118.890,4.853)
O3': (91.447,119.844,3.430)
OP2: (95.818,116.775,6.059)
C3': (92.676,119.314,3.876)
C1': (93.947,118.677,1.953)
C5': (94.875,120.236,4.730)
O6: (98.313,115.322,-0.506)
O4': (94.430,119.937,2.393)
C8: (95.883,117.142,2.551)
C2: (95.846,117.541,-1.807)
C6: (97.368,116.132,-0.494)
C5: (96.650,116.653,0.626)
C4: (95.609,117.533,0.399)
P: (95.466,118.199,6.275)
C4': (93.821,120.295,3.664)
C2': (93.106,118.081,3.084)
O2': (92.022,117.321,2.580)
N1: (96.882,116.646,-1.692)
N2: (95.550,117.940,-3.051)
N3: (95.158,118.015,-0.780)
N7: (96.813,116.424,1.986)
N9: (95.101,117.828,1.648)
O5': (95.345,118.890,4.853)
O3': (91.447,119.844,3.430)
Image (generated by PyMOL):