ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0577:0576

Extra

PDB:
ATOM 1 O3' G A 576 -7.831 88.258 106.383 1.00 49.32 O
ATOM 2 P U A 577 -7.968 89.329 105.182 1.00 47.91 P
ATOM 3 OP1 U A 577 -8.405 88.624 103.950 1.00 48.47 O
ATOM 4 OP2 U A 577 -6.753 90.176 105.146 1.00 48.38 O
ATOM 5 O5' U A 577 -9.160 90.264 105.675 1.00 47.48 O
ATOM 6 C5' U A 577 -10.458 89.714 105.999 1.00 46.86 C
ATOM 7 C4' U A 577 -11.007 90.376 107.240 1.00 46.34 C
ATOM 8 O4' U A 577 -10.366 89.846 108.432 1.00 46.60 O
ATOM 9 C3' U A 577 -10.744 91.866 107.303 1.00 46.89 C
ATOM 10 O3' U A 577 -11.701 92.583 106.537 1.00 48.80 O
ATOM 11 C2' U A 577 -10.815 92.163 108.795 1.00 46.47 C
ATOM 12 O2' U A 577 -12.137 92.331 109.253 1.00 45.95 O
ATOM 13 C1' U A 577 -10.216 90.882 109.393 1.00 46.66 C
ATOM 14 N1 U A 577 -8.794 90.982 109.758 1.00 46.13 N
ATOM 15 C2 U A 577 -8.419 91.990 110.628 1.00 46.32 C
ATOM 16 O2 U A 577 -9.211 92.801 111.086 1.00 45.22 O
ATOM 17 N3 U A 577 -7.078 92.018 110.940 1.00 45.86 N
ATOM 18 C4 U A 577 -6.095 91.165 110.474 1.00 45.55 C
ATOM 19 O4 U A 577 -4.928 91.333 110.830 1.00 45.65 O
ATOM 20 C5 U A 577 -6.559 90.153 109.575 1.00 45.70 C
ATOM 21 C6 U A 577 -7.859 90.096 109.256 1.00 47.19 C
ATOM 22 P A A 578 -11.259 93.918 105.770 1.00 49.00 P
ATOM 23 OP1 A A 578 -12.394 94.404 104.943 1.00 50.78 O
ATOM 24 OP2 A A 578 -9.948 93.645 105.127 1.00 51.20 O
ATOM 25 O5' A A 578 -11.023 94.961 106.945 1.00 48.52 O
TER

ATOM 1 O3' A B 575 -8.672 85.330 109.953 1.00 50.48 O
ATOM 2 P G B 576 -8.894 83.928 109.216 1.00 52.44 P
ATOM 3 OP1 G B 576 -10.355 83.724 109.074 1.00 56.86 O
ATOM 4 OP2 G B 576 -8.075 82.913 109.921 1.00 54.92 O
ATOM 5 O5' G B 576 -8.314 84.158 107.746 1.00 53.51 O
ATOM 6 C5' G B 576 -7.032 84.776 107.549 1.00 52.07 C
ATOM 7 C4' G B 576 -7.167 86.286 107.526 1.00 50.63 C
ATOM 8 O4' G B 576 -6.031 86.881 108.199 1.00 48.87 O
ATOM 9 C3' G B 576 -7.213 86.977 106.166 1.00 49.00 C
ATOM 10 O3' G B 576 -7.831 88.258 106.383 1.00 49.32 O
ATOM 11 C2' G B 576 -5.724 87.102 105.857 1.00 47.36 C
ATOM 12 O2' G B 576 -5.414 88.091 104.896 1.00 46.81 O
ATOM 13 C1' G B 576 -5.171 87.465 107.239 1.00 45.60 C
ATOM 14 N9 G B 576 -3.825 86.987 107.519 1.00 40.73 N
ATOM 15 C8 G B 576 -3.202 85.872 107.010 1.00 39.86 C
ATOM 16 N7 G B 576 -1.997 85.706 107.475 1.00 36.26 N
ATOM 17 C5 G B 576 -1.811 86.781 108.334 1.00 35.80 C
ATOM 18 C6 G B 576 -0.694 87.145 109.113 1.00 35.00 C
ATOM 19 O6 G B 576 0.394 86.578 109.196 1.00 34.75 O
ATOM 20 N1 G B 576 -0.934 88.303 109.846 1.00 34.22 N
ATOM 21 C2 G B 576 -2.105 89.022 109.826 1.00 35.54 C
ATOM 22 N2 G B 576 -2.158 90.108 110.619 1.00 36.18 N
ATOM 23 N3 G B 576 -3.151 88.698 109.088 1.00 36.03 N
ATOM 24 C4 G B 576 -2.934 87.575 108.373 1.00 37.29 C
ATOM 25 P U B 577 -7.968 89.329 105.182 1.00 47.91 P
ATOM 26 OP1 U B 577 -8.405 88.624 103.950 1.00 48.47 O
ATOM 27 OP2 U B 577 -6.753 90.176 105.146 1.00 48.38 O
ATOM 28 O5' U B 577 -9.160 90.264 105.675 1.00 47.48 O
TER

Atoms:
C4: (-6.095,91.165,110.474)
N3: (-7.078,92.018,110.940)
OP1: (-8.405,88.624,103.950)
OP2: (-6.753,90.176,105.146)
C2: (-8.419,91.990,110.628)
C1': (-10.216,90.882,109.393)
C3': (-10.744,91.866,107.303)
O5': (-9.160,90.264,105.675)
O4': (-10.366,89.846,108.432)
C5': (-10.458,89.714,105.999)
P: (-7.968,89.329,105.182)
C4': (-11.007,90.376,107.240)
C2': (-10.815,92.163,108.795)
O2': (-12.137,92.331,109.253)
N1: (-8.794,90.982,109.758)
O4: (-4.928,91.333,110.830)
O2: (-9.211,92.801,111.086)
C6: (-7.859,90.096,109.256)
C5: (-6.559,90.153,109.575)
O3': (-11.701,92.583,106.537)
OP1: (-10.355,83.724,109.074)
OP2: (-8.075,82.913,109.921)
C3': (-7.213,86.977,106.166)
C1': (-5.171,87.465,107.239)
C5': (-7.032,84.776,107.549)
O6: (0.394,86.578,109.196)
O4': (-6.031,86.881,108.199)
C8: (-3.202,85.872,107.010)
C2: (-2.105,89.022,109.826)
C6: (-0.694,87.145,109.113)
C5: (-1.811,86.781,108.334)
C4: (-2.934,87.575,108.373)
P: (-8.894,83.928,109.216)
C4': (-7.167,86.286,107.526)
C2': (-5.724,87.102,105.857)
O2': (-5.414,88.091,104.896)
N1: (-0.934,88.303,109.846)
N2: (-2.158,90.108,110.619)
N3: (-3.151,88.698,109.088)
N7: (-1.997,85.706,107.475)
N9: (-3.825,86.987,107.519)
O5': (-8.314,84.158,107.746)
O3': (-7.831,88.258,106.383)
Image (generated by PyMOL):
PyMOL image
show in jmol