Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0253:0252
Extra
PDB:
ATOM 1 O3' G A 252 91.766 119.775 3.574 1.00 64.15 O
ATOM 2 P U A 253 90.472 119.779 4.515 1.00 61.71 P
ATOM 3 OP1 U A 253 90.883 120.410 5.789 1.00 62.79 O
ATOM 4 OP2 U A 253 89.887 118.419 4.526 1.00 63.01 O
ATOM 5 O5' U A 253 89.454 120.739 3.767 1.00 62.00 O
ATOM 6 C5' U A 253 89.254 122.093 4.197 1.00 62.50 C
ATOM 7 C4' U A 253 88.824 122.931 3.026 1.00 62.53 C
ATOM 8 O4' U A 253 89.948 123.112 2.128 1.00 62.54 O
ATOM 9 C3' U A 253 87.766 122.263 2.171 1.00 62.29 C
ATOM 10 O3' U A 253 86.468 122.461 2.704 1.00 64.24 O
ATOM 11 C2' U A 253 87.974 122.926 0.820 1.00 61.53 C
ATOM 12 O2' U A 253 87.396 124.214 0.767 1.00 61.87 O
ATOM 13 C1' U A 253 89.502 123.041 0.783 1.00 61.02 C
ATOM 14 N1 U A 253 90.172 121.898 0.138 1.00 59.91 N
ATOM 15 C2 U A 253 90.009 121.735 -1.231 1.00 59.51 C
ATOM 16 O2 U A 253 89.349 122.497 -1.923 1.00 59.46 O
ATOM 17 N3 U A 253 90.651 120.647 -1.761 1.00 58.08 N
ATOM 18 C4 U A 253 91.423 119.729 -1.092 1.00 59.10 C
ATOM 19 O4 U A 253 91.929 118.796 -1.719 1.00 60.75 O
ATOM 20 C5 U A 253 91.552 119.966 0.313 1.00 58.35 C
ATOM 21 C6 U A 253 90.939 121.012 0.866 1.00 58.16 C
ATOM 22 P G A 254 85.430 121.240 2.727 1.00 65.45 P
ATOM 23 OP1 G A 254 84.121 121.773 3.193 1.00 63.07 O
ATOM 24 OP2 G A 254 86.071 120.114 3.452 1.00 63.95 O
ATOM 25 O5' G A 254 85.296 120.817 1.194 1.00 66.66 O
TER
ATOM 1 O3' U B 251 97.136 119.003 7.153 1.00 64.35 O
ATOM 2 P G B 252 95.820 118.276 6.574 1.00 65.31 P
ATOM 3 OP1 G B 252 94.652 118.692 7.396 1.00 64.88 O
ATOM 4 OP2 G B 252 96.102 116.833 6.379 1.00 64.83 O
ATOM 5 O5' G B 252 95.640 118.918 5.135 1.00 65.25 O
ATOM 6 C5' G B 252 95.141 120.247 4.987 1.00 65.68 C
ATOM 7 C4' G B 252 94.103 120.273 3.904 1.00 65.52 C
ATOM 8 O4' G B 252 94.737 119.957 2.637 1.00 66.65 O
ATOM 9 C3' G B 252 92.982 119.262 4.082 1.00 65.31 C
ATOM 10 O3' G B 252 91.766 119.775 3.574 1.00 64.15 O
ATOM 11 C2' G B 252 93.478 118.047 3.303 1.00 67.06 C
ATOM 12 O2' G B 252 92.431 117.247 2.779 1.00 67.72 O
ATOM 13 C1' G B 252 94.310 118.682 2.184 1.00 67.47 C
ATOM 14 N9 G B 252 95.502 117.888 1.875 1.00 67.42 N
ATOM 15 C8 G B 252 96.317 117.246 2.777 1.00 67.40 C
ATOM 16 N7 G B 252 97.285 116.579 2.212 1.00 67.61 N
ATOM 17 C5 G B 252 97.107 116.793 0.854 1.00 67.28 C
ATOM 18 C6 G B 252 97.847 116.304 -0.257 1.00 67.46 C
ATOM 19 O6 G B 252 98.820 115.531 -0.262 1.00 66.70 O
ATOM 20 N1 G B 252 97.343 116.792 -1.458 1.00 66.79 N
ATOM 21 C2 G B 252 96.262 117.629 -1.580 1.00 65.58 C
ATOM 22 N2 G B 252 95.952 118.007 -2.827 1.00 64.95 N
ATOM 23 N3 G B 252 95.546 118.068 -0.557 1.00 66.22 N
ATOM 24 C4 G B 252 96.023 117.615 0.625 1.00 67.28 C
ATOM 25 P U B 253 90.472 119.779 4.515 1.00 61.71 P
ATOM 26 OP1 U B 253 90.883 120.410 5.789 1.00 62.79 O
ATOM 27 OP2 U B 253 89.887 118.419 4.526 1.00 63.01 O
ATOM 28 O5' U B 253 89.454 120.739 3.767 1.00 62.00 O
TER
ATOM 2 P U A 253 90.472 119.779 4.515 1.00 61.71 P
ATOM 3 OP1 U A 253 90.883 120.410 5.789 1.00 62.79 O
ATOM 4 OP2 U A 253 89.887 118.419 4.526 1.00 63.01 O
ATOM 5 O5' U A 253 89.454 120.739 3.767 1.00 62.00 O
ATOM 6 C5' U A 253 89.254 122.093 4.197 1.00 62.50 C
ATOM 7 C4' U A 253 88.824 122.931 3.026 1.00 62.53 C
ATOM 8 O4' U A 253 89.948 123.112 2.128 1.00 62.54 O
ATOM 9 C3' U A 253 87.766 122.263 2.171 1.00 62.29 C
ATOM 10 O3' U A 253 86.468 122.461 2.704 1.00 64.24 O
ATOM 11 C2' U A 253 87.974 122.926 0.820 1.00 61.53 C
ATOM 12 O2' U A 253 87.396 124.214 0.767 1.00 61.87 O
ATOM 13 C1' U A 253 89.502 123.041 0.783 1.00 61.02 C
ATOM 14 N1 U A 253 90.172 121.898 0.138 1.00 59.91 N
ATOM 15 C2 U A 253 90.009 121.735 -1.231 1.00 59.51 C
ATOM 16 O2 U A 253 89.349 122.497 -1.923 1.00 59.46 O
ATOM 17 N3 U A 253 90.651 120.647 -1.761 1.00 58.08 N
ATOM 18 C4 U A 253 91.423 119.729 -1.092 1.00 59.10 C
ATOM 19 O4 U A 253 91.929 118.796 -1.719 1.00 60.75 O
ATOM 20 C5 U A 253 91.552 119.966 0.313 1.00 58.35 C
ATOM 21 C6 U A 253 90.939 121.012 0.866 1.00 58.16 C
ATOM 22 P G A 254 85.430 121.240 2.727 1.00 65.45 P
ATOM 23 OP1 G A 254 84.121 121.773 3.193 1.00 63.07 O
ATOM 24 OP2 G A 254 86.071 120.114 3.452 1.00 63.95 O
ATOM 25 O5' G A 254 85.296 120.817 1.194 1.00 66.66 O
TER
ATOM 1 O3' U B 251 97.136 119.003 7.153 1.00 64.35 O
ATOM 2 P G B 252 95.820 118.276 6.574 1.00 65.31 P
ATOM 3 OP1 G B 252 94.652 118.692 7.396 1.00 64.88 O
ATOM 4 OP2 G B 252 96.102 116.833 6.379 1.00 64.83 O
ATOM 5 O5' G B 252 95.640 118.918 5.135 1.00 65.25 O
ATOM 6 C5' G B 252 95.141 120.247 4.987 1.00 65.68 C
ATOM 7 C4' G B 252 94.103 120.273 3.904 1.00 65.52 C
ATOM 8 O4' G B 252 94.737 119.957 2.637 1.00 66.65 O
ATOM 9 C3' G B 252 92.982 119.262 4.082 1.00 65.31 C
ATOM 10 O3' G B 252 91.766 119.775 3.574 1.00 64.15 O
ATOM 11 C2' G B 252 93.478 118.047 3.303 1.00 67.06 C
ATOM 12 O2' G B 252 92.431 117.247 2.779 1.00 67.72 O
ATOM 13 C1' G B 252 94.310 118.682 2.184 1.00 67.47 C
ATOM 14 N9 G B 252 95.502 117.888 1.875 1.00 67.42 N
ATOM 15 C8 G B 252 96.317 117.246 2.777 1.00 67.40 C
ATOM 16 N7 G B 252 97.285 116.579 2.212 1.00 67.61 N
ATOM 17 C5 G B 252 97.107 116.793 0.854 1.00 67.28 C
ATOM 18 C6 G B 252 97.847 116.304 -0.257 1.00 67.46 C
ATOM 19 O6 G B 252 98.820 115.531 -0.262 1.00 66.70 O
ATOM 20 N1 G B 252 97.343 116.792 -1.458 1.00 66.79 N
ATOM 21 C2 G B 252 96.262 117.629 -1.580 1.00 65.58 C
ATOM 22 N2 G B 252 95.952 118.007 -2.827 1.00 64.95 N
ATOM 23 N3 G B 252 95.546 118.068 -0.557 1.00 66.22 N
ATOM 24 C4 G B 252 96.023 117.615 0.625 1.00 67.28 C
ATOM 25 P U B 253 90.472 119.779 4.515 1.00 61.71 P
ATOM 26 OP1 U B 253 90.883 120.410 5.789 1.00 62.79 O
ATOM 27 OP2 U B 253 89.887 118.419 4.526 1.00 63.01 O
ATOM 28 O5' U B 253 89.454 120.739 3.767 1.00 62.00 O
TER
Atoms:
C4: (91.423,119.729,-1.092)
N3: (90.651,120.647,-1.761)
OP1: (90.883,120.410,5.789)
OP2: (89.887,118.419,4.526)
C2: (90.009,121.735,-1.231)
C1': (89.502,123.041,0.783)
C3': (87.766,122.263,2.171)
O5': (89.454,120.739,3.767)
O4': (89.948,123.112,2.128)
C5': (89.254,122.093,4.197)
P: (90.472,119.779,4.515)
C4': (88.824,122.931,3.026)
C2': (87.974,122.926,0.820)
O2': (87.396,124.214,0.767)
N1: (90.172,121.898,0.138)
O4: (91.929,118.796,-1.719)
O2: (89.349,122.497,-1.923)
C6: (90.939,121.012,0.866)
C5: (91.552,119.966,0.313)
O3': (86.468,122.461,2.704)
N3: (90.651,120.647,-1.761)
OP1: (90.883,120.410,5.789)
OP2: (89.887,118.419,4.526)
C2: (90.009,121.735,-1.231)
C1': (89.502,123.041,0.783)
C3': (87.766,122.263,2.171)
O5': (89.454,120.739,3.767)
O4': (89.948,123.112,2.128)
C5': (89.254,122.093,4.197)
P: (90.472,119.779,4.515)
C4': (88.824,122.931,3.026)
C2': (87.974,122.926,0.820)
O2': (87.396,124.214,0.767)
N1: (90.172,121.898,0.138)
O4: (91.929,118.796,-1.719)
O2: (89.349,122.497,-1.923)
C6: (90.939,121.012,0.866)
C5: (91.552,119.966,0.313)
O3': (86.468,122.461,2.704)
OP1: (94.652,118.692,7.396)
OP2: (96.102,116.833,6.379)
C3': (92.982,119.262,4.082)
C1': (94.310,118.682,2.184)
C5': (95.141,120.247,4.987)
O6: (98.820,115.531,-0.262)
O4': (94.737,119.957,2.637)
C8: (96.317,117.246,2.777)
C2: (96.262,117.629,-1.580)
C6: (97.847,116.304,-0.257)
C5: (97.107,116.793,0.854)
C4: (96.023,117.615,0.625)
P: (95.820,118.276,6.574)
C4': (94.103,120.273,3.904)
C2': (93.478,118.047,3.303)
O2': (92.431,117.247,2.779)
N1: (97.343,116.792,-1.458)
N2: (95.952,118.007,-2.827)
N3: (95.546,118.068,-0.557)
N7: (97.285,116.579,2.212)
N9: (95.502,117.888,1.875)
O5': (95.640,118.918,5.135)
O3': (91.766,119.775,3.574)
OP2: (96.102,116.833,6.379)
C3': (92.982,119.262,4.082)
C1': (94.310,118.682,2.184)
C5': (95.141,120.247,4.987)
O6: (98.820,115.531,-0.262)
O4': (94.737,119.957,2.637)
C8: (96.317,117.246,2.777)
C2: (96.262,117.629,-1.580)
C6: (97.847,116.304,-0.257)
C5: (97.107,116.793,0.854)
C4: (96.023,117.615,0.625)
P: (95.820,118.276,6.574)
C4': (94.103,120.273,3.904)
C2': (93.478,118.047,3.303)
O2': (92.431,117.247,2.779)
N1: (97.343,116.792,-1.458)
N2: (95.952,118.007,-2.827)
N3: (95.546,118.068,-0.557)
N7: (97.285,116.579,2.212)
N9: (95.502,117.888,1.875)
O5': (95.640,118.918,5.135)
O3': (91.766,119.775,3.574)
Image (generated by PyMOL):