Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MDG:C3:C2
Extra
PDB:
ATOM 1 O3' G A 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 2 P U A 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 3 OP1 U A 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 4 OP2 U A 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 5 O5' U A 3 25.576 24.912 -7.245 1.00 42.33 O
ATOM 6 C5' U A 3 25.907 25.645 -6.069 1.00 36.29 C
ATOM 7 C4' U A 3 27.399 25.667 -5.864 1.00 38.29 C
ATOM 8 O4' U A 3 27.862 24.305 -5.657 1.00 36.71 O
ATOM 9 C3' U A 3 28.224 26.225 -7.030 1.00 40.93 C
ATOM 10 O3' U A 3 29.341 26.955 -6.519 1.00 44.15 O
ATOM 11 C2' U A 3 28.732 24.968 -7.737 1.00 38.70 C
ATOM 12 O2' U A 3 29.938 25.133 -8.459 1.00 38.66 O
ATOM 13 C1' U A 3 28.911 24.013 -6.559 1.00 34.67 C
ATOM 14 N1 U A 3 28.869 22.580 -6.921 1.00 30.58 N
ATOM 15 C2 U A 3 30.042 21.893 -6.705 1.00 33.80 C
ATOM 16 O2 U A 3 31.035 22.435 -6.247 1.00 34.61 O
ATOM 17 N3 U A 3 30.011 20.560 -7.037 1.00 33.58 N
ATOM 18 C4 U A 3 28.944 19.856 -7.560 1.00 33.95 C
ATOM 19 O4 U A 3 29.091 18.648 -7.805 1.00 32.76 O
ATOM 20 C5 U A 3 27.761 20.650 -7.765 1.00 29.52 C
ATOM 21 C6 U A 3 27.758 21.953 -7.445 1.00 28.52 C
ATOM 22 P A A 4 29.154 28.311 -5.673 1.00 42.93 P
ATOM 23 OP1 A A 4 27.771 28.798 -5.903 1.00 39.82 O
ATOM 24 OP2 A A 4 30.346 29.139 -6.011 1.00 39.60 O
ATOM 25 O5' A A 4 29.245 27.809 -4.163 1.00 43.52 O
TER
ATOM 1 O3' U B 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 2 P G B 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 3 OP1 G B 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 4 OP2 G B 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 5 O5' G B 2 20.699 21.253 -5.745 1.00 52.33 O
ATOM 6 C5' G B 2 21.558 21.225 -4.611 1.00 40.65 C
ATOM 7 C4' G B 2 22.955 21.646 -4.996 1.00 37.70 C
ATOM 8 O4' G B 2 23.865 20.538 -4.758 1.00 38.24 O
ATOM 9 C3' G B 2 23.142 22.027 -6.464 1.00 35.55 C
ATOM 10 O3' G B 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 11 C2' G B 2 23.637 20.730 -7.088 1.00 40.44 C
ATOM 12 O2' G B 2 24.365 20.895 -8.289 1.00 40.81 O
ATOM 13 C1' G B 2 24.527 20.206 -5.965 1.00 38.73 C
ATOM 14 N9 G B 2 24.760 18.762 -6.003 1.00 34.49 N
ATOM 15 C8 G B 2 23.917 17.795 -6.493 1.00 33.74 C
ATOM 16 N7 G B 2 24.421 16.592 -6.394 1.00 36.90 N
ATOM 17 C5 G B 2 25.671 16.774 -5.805 1.00 35.10 C
ATOM 18 C6 G B 2 26.684 15.837 -5.442 1.00 37.24 C
ATOM 19 O6 G B 2 26.678 14.599 -5.573 1.00 42.89 O
ATOM 20 N1 G B 2 27.795 16.465 -4.874 1.00 31.79 N
ATOM 21 C2 G B 2 27.922 17.819 -4.676 1.00 30.75 C
ATOM 22 N2 G B 2 29.067 18.235 -4.108 1.00 32.48 N
ATOM 23 N3 G B 2 26.988 18.699 -5.005 1.00 32.46 N
ATOM 24 C4 G B 2 25.897 18.116 -5.563 1.00 35.99 C
ATOM 25 P U B 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 26 OP1 U B 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 27 OP2 U B 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 28 O5' U B 3 25.576 24.912 -7.245 1.00 42.33 O
TER
ATOM 2 P U A 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 3 OP1 U A 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 4 OP2 U A 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 5 O5' U A 3 25.576 24.912 -7.245 1.00 42.33 O
ATOM 6 C5' U A 3 25.907 25.645 -6.069 1.00 36.29 C
ATOM 7 C4' U A 3 27.399 25.667 -5.864 1.00 38.29 C
ATOM 8 O4' U A 3 27.862 24.305 -5.657 1.00 36.71 O
ATOM 9 C3' U A 3 28.224 26.225 -7.030 1.00 40.93 C
ATOM 10 O3' U A 3 29.341 26.955 -6.519 1.00 44.15 O
ATOM 11 C2' U A 3 28.732 24.968 -7.737 1.00 38.70 C
ATOM 12 O2' U A 3 29.938 25.133 -8.459 1.00 38.66 O
ATOM 13 C1' U A 3 28.911 24.013 -6.559 1.00 34.67 C
ATOM 14 N1 U A 3 28.869 22.580 -6.921 1.00 30.58 N
ATOM 15 C2 U A 3 30.042 21.893 -6.705 1.00 33.80 C
ATOM 16 O2 U A 3 31.035 22.435 -6.247 1.00 34.61 O
ATOM 17 N3 U A 3 30.011 20.560 -7.037 1.00 33.58 N
ATOM 18 C4 U A 3 28.944 19.856 -7.560 1.00 33.95 C
ATOM 19 O4 U A 3 29.091 18.648 -7.805 1.00 32.76 O
ATOM 20 C5 U A 3 27.761 20.650 -7.765 1.00 29.52 C
ATOM 21 C6 U A 3 27.758 21.953 -7.445 1.00 28.52 C
ATOM 22 P A A 4 29.154 28.311 -5.673 1.00 42.93 P
ATOM 23 OP1 A A 4 27.771 28.798 -5.903 1.00 39.82 O
ATOM 24 OP2 A A 4 30.346 29.139 -6.011 1.00 39.60 O
ATOM 25 O5' A A 4 29.245 27.809 -4.163 1.00 43.52 O
TER
ATOM 1 O3' U B 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 2 P G B 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 3 OP1 G B 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 4 OP2 G B 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 5 O5' G B 2 20.699 21.253 -5.745 1.00 52.33 O
ATOM 6 C5' G B 2 21.558 21.225 -4.611 1.00 40.65 C
ATOM 7 C4' G B 2 22.955 21.646 -4.996 1.00 37.70 C
ATOM 8 O4' G B 2 23.865 20.538 -4.758 1.00 38.24 O
ATOM 9 C3' G B 2 23.142 22.027 -6.464 1.00 35.55 C
ATOM 10 O3' G B 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 11 C2' G B 2 23.637 20.730 -7.088 1.00 40.44 C
ATOM 12 O2' G B 2 24.365 20.895 -8.289 1.00 40.81 O
ATOM 13 C1' G B 2 24.527 20.206 -5.965 1.00 38.73 C
ATOM 14 N9 G B 2 24.760 18.762 -6.003 1.00 34.49 N
ATOM 15 C8 G B 2 23.917 17.795 -6.493 1.00 33.74 C
ATOM 16 N7 G B 2 24.421 16.592 -6.394 1.00 36.90 N
ATOM 17 C5 G B 2 25.671 16.774 -5.805 1.00 35.10 C
ATOM 18 C6 G B 2 26.684 15.837 -5.442 1.00 37.24 C
ATOM 19 O6 G B 2 26.678 14.599 -5.573 1.00 42.89 O
ATOM 20 N1 G B 2 27.795 16.465 -4.874 1.00 31.79 N
ATOM 21 C2 G B 2 27.922 17.819 -4.676 1.00 30.75 C
ATOM 22 N2 G B 2 29.067 18.235 -4.108 1.00 32.48 N
ATOM 23 N3 G B 2 26.988 18.699 -5.005 1.00 32.46 N
ATOM 24 C4 G B 2 25.897 18.116 -5.563 1.00 35.99 C
ATOM 25 P U B 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 26 OP1 U B 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 27 OP2 U B 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 28 O5' U B 3 25.576 24.912 -7.245 1.00 42.33 O
TER
Atoms:
C4: (28.944,19.856,-7.560)
N3: (30.011,20.560,-7.037)
OP1: (23.075,25.105,-6.810)
OP2: (24.006,23.826,-8.882)
C2: (30.042,21.893,-6.705)
C1': (28.911,24.013,-6.559)
C3': (28.224,26.225,-7.030)
O5': (25.576,24.912,-7.245)
O4': (27.862,24.305,-5.657)
C5': (25.907,25.645,-6.069)
P: (24.126,24.278,-7.463)
C4': (27.399,25.667,-5.864)
C2': (28.732,24.968,-7.737)
O2': (29.938,25.133,-8.459)
N1: (28.869,22.580,-6.921)
O4: (29.091,18.648,-7.805)
O2: (31.035,22.435,-6.247)
C6: (27.758,21.953,-7.445)
C5: (27.761,20.650,-7.765)
O3': (29.341,26.955,-6.519)
N3: (30.011,20.560,-7.037)
OP1: (23.075,25.105,-6.810)
OP2: (24.006,23.826,-8.882)
C2: (30.042,21.893,-6.705)
C1': (28.911,24.013,-6.559)
C3': (28.224,26.225,-7.030)
O5': (25.576,24.912,-7.245)
O4': (27.862,24.305,-5.657)
C5': (25.907,25.645,-6.069)
P: (24.126,24.278,-7.463)
C4': (27.399,25.667,-5.864)
C2': (28.732,24.968,-7.737)
O2': (29.938,25.133,-8.459)
N1: (28.869,22.580,-6.921)
O4: (29.091,18.648,-7.805)
O2: (31.035,22.435,-6.247)
C6: (27.758,21.953,-7.445)
C5: (27.761,20.650,-7.765)
O3': (29.341,26.955,-6.519)
OP1: (18.538,20.725,-6.931)
OP2: (20.264,18.892,-6.518)
C3': (23.142,22.027,-6.464)
C1': (24.527,20.206,-5.965)
C5': (21.558,21.225,-4.611)
O6: (26.678,14.599,-5.573)
O4': (23.865,20.538,-4.758)
C8: (23.917,17.795,-6.493)
C2: (27.922,17.819,-4.676)
C6: (26.684,15.837,-5.442)
C5: (25.671,16.774,-5.805)
C4: (25.897,18.116,-5.563)
P: (19.608,20.147,-6.078)
C4': (22.955,21.646,-4.996)
C2': (23.637,20.730,-7.088)
O2': (24.365,20.895,-8.289)
N1: (27.795,16.465,-4.874)
N2: (29.067,18.235,-4.108)
N3: (26.988,18.699,-5.005)
N7: (24.421,16.592,-6.394)
N9: (24.760,18.762,-6.003)
O5': (20.699,21.253,-5.745)
O3': (24.206,22.965,-6.549)
OP2: (20.264,18.892,-6.518)
C3': (23.142,22.027,-6.464)
C1': (24.527,20.206,-5.965)
C5': (21.558,21.225,-4.611)
O6: (26.678,14.599,-5.573)
O4': (23.865,20.538,-4.758)
C8: (23.917,17.795,-6.493)
C2: (27.922,17.819,-4.676)
C6: (26.684,15.837,-5.442)
C5: (25.671,16.774,-5.805)
C4: (25.897,18.116,-5.563)
P: (19.608,20.147,-6.078)
C4': (22.955,21.646,-4.996)
C2': (23.637,20.730,-7.088)
O2': (24.365,20.895,-8.289)
N1: (27.795,16.465,-4.874)
N2: (29.067,18.235,-4.108)
N3: (26.988,18.699,-5.005)
N7: (24.421,16.592,-6.394)
N9: (24.760,18.762,-6.003)
O5': (20.699,21.253,-5.745)
O3': (24.206,22.965,-6.549)
Image (generated by PyMOL):