ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1H4Q:T57:T55

Extra

PDB:
ATOM 1 O3' A A 56 -0.902 69.283 113.332 1.00 60.97 O
ATOM 2 P U A 57 -2.225 68.799 114.113 1.00 60.34 P
ATOM 3 OP1 U A 57 -2.936 69.995 114.630 1.00 59.74 O
ATOM 4 OP2 U A 57 -1.866 67.706 115.044 1.00 67.19 O
ATOM 5 O5' U A 57 -3.123 68.131 112.990 1.00 55.46 O
ATOM 6 C5' U A 57 -4.042 67.128 113.342 1.00 55.88 C
ATOM 7 C4' U A 57 -4.222 66.164 112.211 1.00 62.61 C
ATOM 8 O4' U A 57 -2.922 65.679 111.777 1.00 64.47 O
ATOM 9 C3' U A 57 -4.966 64.957 112.750 1.00 68.32 C
ATOM 10 O3' U A 57 -6.137 64.592 112.038 1.00 72.66 O
ATOM 11 C2' U A 57 -3.914 63.896 113.045 1.00 66.25 C
ATOM 12 O2' U A 57 -4.344 62.597 112.710 1.00 66.42 O
ATOM 13 C1' U A 57 -2.781 64.308 112.097 1.00 64.94 C
ATOM 14 N1 U A 57 -1.414 64.046 112.566 1.00 61.44 N
ATOM 15 C2 U A 57 -0.876 62.801 112.282 1.00 61.27 C
ATOM 16 O2 U A 57 -1.482 61.945 111.653 1.00 62.15 O
ATOM 17 N3 U A 57 0.394 62.594 112.758 1.00 59.25 N
ATOM 18 C4 U A 57 1.162 63.485 113.471 1.00 61.81 C
ATOM 19 O4 U A 57 2.287 63.151 113.840 1.00 66.65 O
ATOM 20 C5 U A 57 0.538 64.754 113.717 1.00 61.99 C
ATOM 21 C6 U A 57 -0.698 64.984 113.264 1.00 60.02 C
ATOM 22 P C A 58 -7.566 64.733 112.735 1.00 77.64 P
ATOM 23 OP1 C A 58 -8.488 63.812 112.026 1.00 78.62 O
ATOM 24 OP2 C A 58 -7.878 66.187 112.822 1.00 72.50 O
ATOM 25 O5' C A 58 -7.341 64.166 114.204 1.00 79.48 O
TER

ATOM 1 O3' A B 54 4.350 65.670 121.000 1.00 52.13 O
ATOM 2 P G B 55 3.224 66.749 120.644 1.00 52.85 P
ATOM 3 OP1 G B 55 3.882 67.957 120.086 1.00 51.31 O
ATOM 4 OP2 G B 55 2.408 66.863 121.882 1.00 50.57 O
ATOM 5 O5' G B 55 2.388 66.064 119.466 1.00 50.64 O
ATOM 6 C5' G B 55 3.025 65.652 118.254 1.00 47.55 C
ATOM 7 C4' G B 55 2.127 65.904 117.058 1.00 50.55 C
ATOM 8 O4' G B 55 0.838 65.281 117.282 1.00 53.50 O
ATOM 9 C3' G B 55 1.847 67.390 116.871 1.00 51.66 C
ATOM 10 O3' G B 55 1.787 67.720 115.488 1.00 53.76 O
ATOM 11 C2' G B 55 0.505 67.642 117.550 1.00 52.82 C
ATOM 12 O2' G B 55 -0.287 68.554 116.829 1.00 59.25 O
ATOM 13 C1' G B 55 -0.152 66.268 117.430 1.00 50.55 C
ATOM 14 N9 G B 55 -1.121 65.844 118.431 1.00 48.92 N
ATOM 15 C8 G B 55 -1.365 66.394 119.666 1.00 47.23 C
ATOM 16 N7 G B 55 -2.324 65.785 120.311 1.00 47.55 N
ATOM 17 C5 G B 55 -2.729 64.772 119.451 1.00 47.58 C
ATOM 18 C6 G B 55 -3.733 63.777 119.606 1.00 51.12 C
ATOM 19 O6 G B 55 -4.498 63.597 120.565 1.00 58.44 O
ATOM 20 N1 G B 55 -3.804 62.941 118.494 1.00 47.17 N
ATOM 21 C2 G B 55 -3.016 63.055 117.376 1.00 52.11 C
ATOM 22 N2 G B 55 -3.236 62.160 116.403 1.00 55.81 N
ATOM 23 N3 G B 55 -2.079 63.980 117.218 1.00 47.42 N
ATOM 24 C4 G B 55 -1.993 64.796 118.290 1.00 46.56 C
ATOM 25 P A B 56 3.030 68.399 114.744 1.00 56.08 P
ATOM 26 OP1 A B 56 3.839 67.316 114.119 1.00 50.44 O
ATOM 27 OP2 A B 56 3.674 69.392 115.642 1.00 55.40 O
ATOM 28 O5' A B 56 2.330 69.203 113.568 1.00 59.25 O
TER

Atoms:
C4: (1.162,63.485,113.471)
N3: (0.394,62.594,112.758)
OP1: (-2.936,69.995,114.630)
OP2: (-1.866,67.706,115.044)
C2: (-0.876,62.801,112.282)
C1': (-2.781,64.308,112.097)
C3': (-4.966,64.957,112.750)
O5': (-3.123,68.131,112.990)
O4': (-2.922,65.679,111.777)
C5': (-4.042,67.128,113.342)
P: (-2.225,68.799,114.113)
C4': (-4.222,66.164,112.211)
C2': (-3.914,63.896,113.045)
O2': (-4.344,62.597,112.710)
N1: (-1.414,64.046,112.566)
O4: (2.287,63.151,113.840)
O2: (-1.482,61.945,111.653)
C6: (-0.698,64.984,113.264)
C5: (0.538,64.754,113.717)
O3': (-6.137,64.592,112.038)
OP1: (3.882,67.957,120.086)
OP2: (2.408,66.863,121.882)
C3': (1.847,67.390,116.871)
C1': (-0.152,66.268,117.430)
C5': (3.025,65.652,118.254)
O6: (-4.498,63.597,120.565)
O4': (0.838,65.281,117.282)
C8: (-1.365,66.394,119.666)
C2: (-3.016,63.055,117.376)
C6: (-3.733,63.777,119.606)
C5: (-2.729,64.772,119.451)
C4: (-1.993,64.796,118.290)
P: (3.224,66.749,120.644)
C4': (2.127,65.904,117.058)
C2': (0.505,67.642,117.550)
O2': (-0.287,68.554,116.829)
N1: (-3.804,62.941,118.494)
N2: (-3.236,62.160,116.403)
N3: (-2.079,63.980,117.218)
N7: (-2.324,65.785,120.311)
N9: (-1.121,65.844,118.431)
O5': (2.388,66.064,119.466)
O3': (1.787,67.720,115.488)
Image (generated by PyMOL):
PyMOL image
show in jmol