ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RKF:B48:B47

Extra

PDB:
ATOM 1 O3' G A 47 15.888 10.860 -8.883 1.00 67.91 O
ATOM 2 P U A 48 16.149 9.948 -7.583 1.00 66.71 P
ATOM 3 OP1 U A 48 15.719 8.570 -7.923 1.00 57.06 O
ATOM 4 OP2 U A 48 15.507 10.630 -6.434 1.00 74.20 O
ATOM 5 O5' U A 48 17.735 9.997 -7.424 1.00 73.27 O
ATOM 6 C5' U A 48 18.455 8.874 -6.918 1.00 72.32 C
ATOM 7 C4' U A 48 19.883 9.228 -6.569 1.00 77.00 C
ATOM 8 O4' U A 48 20.544 9.765 -7.749 1.00 75.34 O
ATOM 9 C3' U A 48 20.045 10.281 -5.473 1.00 81.68 C
ATOM 10 O3' U A 48 21.220 10.012 -4.698 1.00 80.61 O
ATOM 11 C2' U A 48 20.248 11.565 -6.271 1.00 78.76 C
ATOM 12 O2' U A 48 20.937 12.583 -5.576 1.00 76.06 O
ATOM 13 C1' U A 48 21.046 11.057 -7.469 1.00 76.08 C
ATOM 14 N1 U A 48 20.901 11.887 -8.687 1.00 74.01 N
ATOM 15 C2 U A 48 21.961 12.701 -9.034 1.00 73.69 C
ATOM 16 O2 U A 48 22.987 12.755 -8.376 1.00 73.31 O
ATOM 17 N3 U A 48 21.777 13.449 -10.173 1.00 69.68 N
ATOM 18 C4 U A 48 20.661 13.464 -10.986 1.00 68.57 C
ATOM 19 O4 U A 48 20.639 14.192 -11.982 1.00 65.98 O
ATOM 20 C5 U A 48 19.609 12.593 -10.560 1.00 67.87 C
ATOM 21 C6 U A 48 19.761 11.852 -9.456 1.00 67.91 C
ATOM 22 P A A 49 21.962 8.584 -4.777 1.00 89.86 P
ATOM 23 OP1 A A 49 22.946 8.544 -3.669 1.00 92.53 O
ATOM 24 OP2 A A 49 22.453 8.420 -6.168 1.00 83.99 O
ATOM 25 O5' A A 49 20.784 7.552 -4.488 1.00 78.24 O
TER

ATOM 1 O3' U B 46 15.403 6.561 -13.772 1.00 61.54 O
ATOM 2 P G B 47 14.194 7.530 -13.342 1.00 75.90 P
ATOM 3 OP1 G B 47 13.401 6.809 -12.317 1.00 79.77 O
ATOM 4 OP2 G B 47 13.520 7.966 -14.588 1.00 69.93 O
ATOM 5 O5' G B 47 14.947 8.766 -12.674 1.00 71.64 O
ATOM 6 C5' G B 47 16.038 8.559 -11.782 1.00 66.78 C
ATOM 7 C4' G B 47 16.372 9.807 -11.000 1.00 63.61 C
ATOM 8 O4' G B 47 16.623 10.898 -11.925 1.00 61.82 O
ATOM 9 C3' G B 47 15.283 10.293 -10.046 1.00 67.37 C
ATOM 10 O3' G B 47 15.888 10.860 -8.883 1.00 67.91 O
ATOM 11 C2' G B 47 14.591 11.388 -10.855 1.00 68.53 C
ATOM 12 O2' G B 47 13.934 12.367 -10.078 1.00 64.98 O
ATOM 13 C1' G B 47 15.757 11.979 -11.643 1.00 66.79 C
ATOM 14 N9 G B 47 15.363 12.588 -12.917 1.00 66.25 N
ATOM 15 C8 G B 47 14.293 12.228 -13.700 1.00 65.44 C
ATOM 16 N7 G B 47 14.185 12.943 -14.786 1.00 65.03 N
ATOM 17 C5 G B 47 15.251 13.828 -14.719 1.00 60.43 C
ATOM 18 C6 G B 47 15.650 14.848 -15.619 1.00 61.42 C
ATOM 19 O6 G B 47 15.121 15.179 -16.687 1.00 67.01 O
ATOM 20 N1 G B 47 16.786 15.511 -15.169 1.00 62.33 N
ATOM 21 C2 G B 47 17.454 15.231 -14.004 1.00 66.79 C
ATOM 22 N2 G B 47 18.532 15.987 -13.749 1.00 67.80 N
ATOM 23 N3 G B 47 17.093 14.282 -13.155 1.00 61.97 N
ATOM 24 C4 G B 47 15.990 13.624 -13.571 1.00 61.34 C
ATOM 25 P U B 48 16.149 9.948 -7.583 1.00 66.71 P
ATOM 26 OP1 U B 48 15.719 8.570 -7.923 1.00 57.06 O
ATOM 27 OP2 U B 48 15.507 10.630 -6.434 1.00 74.20 O
ATOM 28 O5' U B 48 17.735 9.997 -7.424 1.00 73.27 O
TER

Atoms:
C4: (20.661,13.464,-10.986)
N3: (21.777,13.449,-10.173)
OP1: (15.719,8.570,-7.923)
OP2: (15.507,10.630,-6.434)
C2: (21.961,12.701,-9.034)
C1': (21.046,11.057,-7.469)
C3': (20.045,10.281,-5.473)
O5': (17.735,9.997,-7.424)
O4': (20.544,9.765,-7.749)
C5': (18.455,8.874,-6.918)
P: (16.149,9.948,-7.583)
C4': (19.883,9.228,-6.569)
C2': (20.248,11.565,-6.271)
O2': (20.937,12.583,-5.576)
N1: (20.901,11.887,-8.687)
O4: (20.639,14.192,-11.982)
O2: (22.987,12.755,-8.376)
C6: (19.761,11.852,-9.456)
C5: (19.609,12.593,-10.560)
O3': (21.220,10.012,-4.698)
OP1: (13.401,6.809,-12.317)
OP2: (13.520,7.966,-14.588)
C3': (15.283,10.293,-10.046)
C1': (15.757,11.979,-11.643)
C5': (16.038,8.559,-11.782)
O6: (15.121,15.179,-16.687)
O4': (16.623,10.898,-11.925)
C8: (14.293,12.228,-13.700)
C2: (17.454,15.231,-14.004)
C6: (15.650,14.848,-15.619)
C5: (15.251,13.828,-14.719)
C4: (15.990,13.624,-13.571)
P: (14.194,7.530,-13.342)
C4': (16.372,9.807,-11.000)
C2': (14.591,11.388,-10.855)
O2': (13.934,12.367,-10.078)
N1: (16.786,15.511,-15.169)
N2: (18.532,15.987,-13.749)
N3: (17.093,14.282,-13.155)
N7: (14.185,12.943,-14.786)
N9: (15.363,12.588,-12.917)
O5': (14.947,8.766,-12.674)
O3': (15.888,10.860,-8.883)
Image (generated by PyMOL):
PyMOL image
show in jmol