Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A511:A513
Extra
PDB:
ATOM 1 O3' A A 510 119.946 28.926 42.045 1.00160.15 O
ATOM 2 P A A 511 118.947 28.793 43.290 1.00137.85 P
ATOM 3 OP1 A A 511 119.019 30.063 44.047 1.00149.42 O
ATOM 4 OP2 A A 511 119.287 27.527 43.996 1.00132.12 O
ATOM 5 O5' A A 511 117.528 28.669 42.571 1.00132.87 O
ATOM 6 C5' A A 511 116.845 29.825 42.084 1.00125.38 C
ATOM 7 C4' A A 511 115.671 30.177 42.962 1.00124.59 C
ATOM 8 O4' A A 511 114.710 29.089 42.888 1.00118.57 O
ATOM 9 C3' A A 511 116.025 30.351 44.439 1.00127.92 C
ATOM 10 O3' A A 511 115.351 31.471 45.053 1.00123.28 O
ATOM 11 C2' A A 511 115.592 29.037 45.089 1.00124.04 C
ATOM 12 O2' A A 511 115.154 29.153 46.427 1.00123.39 O
ATOM 13 C1' A A 511 114.475 28.536 44.172 1.00124.09 C
ATOM 14 N9 A A 511 114.465 27.071 44.049 1.00120.90 N
ATOM 15 C8 A A 511 115.587 26.289 44.186 1.00124.01 C
ATOM 16 N7 A A 511 115.389 25.002 44.074 1.00116.69 N
ATOM 17 C5 A A 511 114.027 24.916 43.867 1.00113.52 C
ATOM 18 C6 A A 511 113.199 23.800 43.679 1.00111.32 C
ATOM 19 N6 A A 511 113.659 22.546 43.671 1.00109.43 N
ATOM 20 N1 A A 511 111.878 24.026 43.496 1.00109.36 N
ATOM 21 C2 A A 511 111.440 25.294 43.502 1.00110.09 C
ATOM 22 N3 A A 511 112.126 26.428 43.670 1.00118.21 N
ATOM 23 C4 A A 511 113.435 26.174 43.855 1.00117.75 C
ATOM 24 P U A 512 114.057 32.194 44.414 1.00119.12 P
ATOM 25 OP1 U A 512 113.356 31.204 43.560 1.00113.30 O
ATOM 26 OP2 U A 512 114.523 33.462 43.809 1.00 90.16 O
ATOM 27 O5' U A 512 113.189 32.504 45.714 1.00103.23 O
TER
ATOM 1 O3' U B 512 111.473 30.445 48.543 1.00113.23 O
ATOM 2 P A B 513 111.413 29.205 47.521 1.00116.14 P
ATOM 3 OP1 A B 513 111.565 27.966 48.341 1.00119.21 O
ATOM 4 OP2 A B 513 112.395 29.470 46.446 1.00113.03 O
ATOM 5 O5' A B 513 109.930 29.297 46.935 1.00106.72 O
ATOM 6 C5' A B 513 108.796 29.197 47.798 1.00108.32 C
ATOM 7 C4' A B 513 107.764 28.202 47.292 1.00109.29 C
ATOM 8 O4' A B 513 106.937 28.837 46.280 1.00102.81 O
ATOM 9 C3' A B 513 108.317 26.928 46.646 1.00107.10 C
ATOM 10 O3' A B 513 107.423 25.839 46.909 1.00101.51 O
ATOM 11 C2' A B 513 108.262 27.275 45.163 1.00 97.82 C
ATOM 12 O2' A B 513 108.245 26.163 44.298 1.00 95.68 O
ATOM 13 C1' A B 513 106.958 28.058 45.105 1.00 99.20 C
ATOM 14 N9 A B 513 106.837 28.956 43.960 1.00106.29 N
ATOM 15 C8 A B 513 107.719 29.899 43.499 1.00106.34 C
ATOM 16 N7 A B 513 107.278 30.542 42.447 1.00105.89 N
ATOM 17 C5 A B 513 106.029 29.981 42.219 1.00105.57 C
ATOM 18 C6 A B 513 105.051 30.221 41.253 1.00107.60 C
ATOM 19 N6 A B 513 105.207 31.136 40.300 1.00114.23 N
ATOM 20 N1 A B 513 103.910 29.495 41.300 1.00102.35 N
ATOM 21 C2 A B 513 103.766 28.575 42.258 1.00101.69 C
ATOM 22 N3 A B 513 104.614 28.260 43.226 1.00105.73 N
ATOM 23 C4 A B 513 105.737 29.005 43.143 1.00107.86 C
ATOM 24 P C B 514 107.487 25.051 48.309 1.00112.45 P
ATOM 25 OP1 C B 514 106.083 24.750 48.708 1.00110.68 O
ATOM 26 OP2 C B 514 108.333 25.859 49.228 1.00126.20 O
ATOM 27 O5' C B 514 108.255 23.704 47.922 1.00 98.99 O
TER
ATOM 2 P A A 511 118.947 28.793 43.290 1.00137.85 P
ATOM 3 OP1 A A 511 119.019 30.063 44.047 1.00149.42 O
ATOM 4 OP2 A A 511 119.287 27.527 43.996 1.00132.12 O
ATOM 5 O5' A A 511 117.528 28.669 42.571 1.00132.87 O
ATOM 6 C5' A A 511 116.845 29.825 42.084 1.00125.38 C
ATOM 7 C4' A A 511 115.671 30.177 42.962 1.00124.59 C
ATOM 8 O4' A A 511 114.710 29.089 42.888 1.00118.57 O
ATOM 9 C3' A A 511 116.025 30.351 44.439 1.00127.92 C
ATOM 10 O3' A A 511 115.351 31.471 45.053 1.00123.28 O
ATOM 11 C2' A A 511 115.592 29.037 45.089 1.00124.04 C
ATOM 12 O2' A A 511 115.154 29.153 46.427 1.00123.39 O
ATOM 13 C1' A A 511 114.475 28.536 44.172 1.00124.09 C
ATOM 14 N9 A A 511 114.465 27.071 44.049 1.00120.90 N
ATOM 15 C8 A A 511 115.587 26.289 44.186 1.00124.01 C
ATOM 16 N7 A A 511 115.389 25.002 44.074 1.00116.69 N
ATOM 17 C5 A A 511 114.027 24.916 43.867 1.00113.52 C
ATOM 18 C6 A A 511 113.199 23.800 43.679 1.00111.32 C
ATOM 19 N6 A A 511 113.659 22.546 43.671 1.00109.43 N
ATOM 20 N1 A A 511 111.878 24.026 43.496 1.00109.36 N
ATOM 21 C2 A A 511 111.440 25.294 43.502 1.00110.09 C
ATOM 22 N3 A A 511 112.126 26.428 43.670 1.00118.21 N
ATOM 23 C4 A A 511 113.435 26.174 43.855 1.00117.75 C
ATOM 24 P U A 512 114.057 32.194 44.414 1.00119.12 P
ATOM 25 OP1 U A 512 113.356 31.204 43.560 1.00113.30 O
ATOM 26 OP2 U A 512 114.523 33.462 43.809 1.00 90.16 O
ATOM 27 O5' U A 512 113.189 32.504 45.714 1.00103.23 O
TER
ATOM 1 O3' U B 512 111.473 30.445 48.543 1.00113.23 O
ATOM 2 P A B 513 111.413 29.205 47.521 1.00116.14 P
ATOM 3 OP1 A B 513 111.565 27.966 48.341 1.00119.21 O
ATOM 4 OP2 A B 513 112.395 29.470 46.446 1.00113.03 O
ATOM 5 O5' A B 513 109.930 29.297 46.935 1.00106.72 O
ATOM 6 C5' A B 513 108.796 29.197 47.798 1.00108.32 C
ATOM 7 C4' A B 513 107.764 28.202 47.292 1.00109.29 C
ATOM 8 O4' A B 513 106.937 28.837 46.280 1.00102.81 O
ATOM 9 C3' A B 513 108.317 26.928 46.646 1.00107.10 C
ATOM 10 O3' A B 513 107.423 25.839 46.909 1.00101.51 O
ATOM 11 C2' A B 513 108.262 27.275 45.163 1.00 97.82 C
ATOM 12 O2' A B 513 108.245 26.163 44.298 1.00 95.68 O
ATOM 13 C1' A B 513 106.958 28.058 45.105 1.00 99.20 C
ATOM 14 N9 A B 513 106.837 28.956 43.960 1.00106.29 N
ATOM 15 C8 A B 513 107.719 29.899 43.499 1.00106.34 C
ATOM 16 N7 A B 513 107.278 30.542 42.447 1.00105.89 N
ATOM 17 C5 A B 513 106.029 29.981 42.219 1.00105.57 C
ATOM 18 C6 A B 513 105.051 30.221 41.253 1.00107.60 C
ATOM 19 N6 A B 513 105.207 31.136 40.300 1.00114.23 N
ATOM 20 N1 A B 513 103.910 29.495 41.300 1.00102.35 N
ATOM 21 C2 A B 513 103.766 28.575 42.258 1.00101.69 C
ATOM 22 N3 A B 513 104.614 28.260 43.226 1.00105.73 N
ATOM 23 C4 A B 513 105.737 29.005 43.143 1.00107.86 C
ATOM 24 P C B 514 107.487 25.051 48.309 1.00112.45 P
ATOM 25 OP1 C B 514 106.083 24.750 48.708 1.00110.68 O
ATOM 26 OP2 C B 514 108.333 25.859 49.228 1.00126.20 O
ATOM 27 O5' C B 514 108.255 23.704 47.922 1.00 98.99 O
TER
Atoms:
OP1: (119.019,30.063,44.047)
OP2: (119.287,27.527,43.996)
C3': (116.025,30.351,44.439)
C1': (114.475,28.536,44.172)
C5': (116.845,29.825,42.084)
O4': (114.710,29.089,42.888)
C8: (115.587,26.289,44.186)
O2': (115.154,29.153,46.427)
C6: (113.199,23.800,43.679)
C5: (114.027,24.916,43.867)
C4: (113.435,26.174,43.855)
P: (118.947,28.793,43.290)
C4': (115.671,30.177,42.962)
C2': (115.592,29.037,45.089)
C2: (111.440,25.294,43.502)
N1: (111.878,24.026,43.496)
N3: (112.126,26.428,43.670)
N6: (113.659,22.546,43.671)
N7: (115.389,25.002,44.074)
N9: (114.465,27.071,44.049)
O5': (117.528,28.669,42.571)
O3': (115.351,31.471,45.053)
OP2: (119.287,27.527,43.996)
C3': (116.025,30.351,44.439)
C1': (114.475,28.536,44.172)
C5': (116.845,29.825,42.084)
O4': (114.710,29.089,42.888)
C8: (115.587,26.289,44.186)
O2': (115.154,29.153,46.427)
C6: (113.199,23.800,43.679)
C5: (114.027,24.916,43.867)
C4: (113.435,26.174,43.855)
P: (118.947,28.793,43.290)
C4': (115.671,30.177,42.962)
C2': (115.592,29.037,45.089)
C2: (111.440,25.294,43.502)
N1: (111.878,24.026,43.496)
N3: (112.126,26.428,43.670)
N6: (113.659,22.546,43.671)
N7: (115.389,25.002,44.074)
N9: (114.465,27.071,44.049)
O5': (117.528,28.669,42.571)
O3': (115.351,31.471,45.053)
OP1: (111.565,27.966,48.341)
OP2: (112.395,29.470,46.446)
C3': (108.317,26.928,46.646)
C1': (106.958,28.058,45.105)
C5': (108.796,29.197,47.798)
O4': (106.937,28.837,46.280)
C8: (107.719,29.899,43.499)
O2': (108.245,26.163,44.298)
C6: (105.051,30.221,41.253)
C5: (106.029,29.981,42.219)
C4: (105.737,29.005,43.143)
P: (111.413,29.205,47.521)
C4': (107.764,28.202,47.292)
C2': (108.262,27.275,45.163)
C2: (103.766,28.575,42.258)
N1: (103.910,29.495,41.300)
N3: (104.614,28.260,43.226)
N6: (105.207,31.136,40.300)
N7: (107.278,30.542,42.447)
N9: (106.837,28.956,43.960)
O5': (109.930,29.297,46.935)
O3': (107.423,25.839,46.909)
OP2: (112.395,29.470,46.446)
C3': (108.317,26.928,46.646)
C1': (106.958,28.058,45.105)
C5': (108.796,29.197,47.798)
O4': (106.937,28.837,46.280)
C8: (107.719,29.899,43.499)
O2': (108.245,26.163,44.298)
C6: (105.051,30.221,41.253)
C5: (106.029,29.981,42.219)
C4: (105.737,29.005,43.143)
P: (111.413,29.205,47.521)
C4': (107.764,28.202,47.292)
C2': (108.262,27.275,45.163)
C2: (103.766,28.575,42.258)
N1: (103.910,29.495,41.300)
N3: (104.614,28.260,43.226)
N6: (105.207,31.136,40.300)
N7: (107.278,30.542,42.447)
N9: (106.837,28.956,43.960)
O5': (109.930,29.297,46.935)
O3': (107.423,25.839,46.909)
Image (generated by PyMOL):