ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:0654:0220

Extra

PDB:
ATOM 1 O3' A A 653 44.765 100.123 33.763 1.00 34.27 O
ATOM 2 P A A 654 44.213 101.344 32.891 1.00 37.06 P
ATOM 3 OP1 A A 654 44.105 102.488 33.834 1.00 37.77 O
ATOM 4 OP2 A A 654 43.017 100.914 32.124 1.00 35.90 O
ATOM 5 O5' A A 654 45.397 101.643 31.868 1.00 35.76 O
ATOM 6 C5' A A 654 46.659 102.150 32.335 1.00 36.45 C
ATOM 7 C4' A A 654 47.720 101.954 31.286 1.00 37.17 C
ATOM 8 O4' A A 654 47.846 100.536 31.001 1.00 37.08 O
ATOM 9 C3' A A 654 47.426 102.583 29.933 1.00 37.28 C
ATOM 10 O3' A A 654 47.803 103.953 29.903 1.00 36.90 O
ATOM 11 C2' A A 654 48.282 101.741 29.000 1.00 37.05 C
ATOM 12 O2' A A 654 49.643 102.111 29.059 1.00 36.69 O
ATOM 13 C1' A A 654 48.115 100.350 29.619 1.00 37.25 C
ATOM 14 N9 A A 654 47.003 99.599 29.033 1.00 37.95 N
ATOM 15 C8 A A 654 45.685 99.618 29.425 1.00 38.19 C
ATOM 16 N7 A A 654 44.907 98.856 28.699 1.00 38.10 N
ATOM 17 C5 A A 654 45.767 98.296 27.765 1.00 38.94 C
ATOM 18 C6 A A 654 45.550 97.409 26.704 1.00 38.85 C
ATOM 19 N6 A A 654 44.349 96.926 26.391 1.00 38.84 N
ATOM 20 N1 A A 654 46.620 97.034 25.964 1.00 38.33 N
ATOM 21 C2 A A 654 47.820 97.534 26.277 1.00 38.50 C
ATOM 22 N3 A A 654 48.149 98.386 27.246 1.00 39.84 N
ATOM 23 C4 A A 654 47.063 98.734 27.964 1.00 38.87 C
ATOM 24 P C A 655 46.834 105.040 29.218 1.00 39.01 P
ATOM 25 OP1 C A 655 47.660 106.258 29.027 1.00 39.76 O
ATOM 26 OP2 C A 655 45.566 105.133 29.984 1.00 38.20 O
ATOM 27 O5' C A 655 46.505 104.437 27.779 1.00 39.90 O
TER

ATOM 1 O3' G B 219 48.549 93.844 22.334 1.00 39.42 O
ATOM 2 P A B 220 48.469 94.983 21.211 1.00 41.03 P
ATOM 3 OP1 A B 220 47.183 94.816 20.479 1.00 37.99 O
ATOM 4 OP2 A B 220 49.762 94.997 20.460 1.00 37.19 O
ATOM 5 O5' A B 220 48.355 96.306 22.082 1.00 38.80 O
ATOM 6 C5' A B 220 48.811 97.555 21.585 1.00 36.98 C
ATOM 7 C4' A B 220 48.769 98.584 22.679 1.00 36.59 C
ATOM 8 O4' A B 220 49.717 98.251 23.730 1.00 35.57 O
ATOM 9 C3' A B 220 49.187 99.961 22.221 1.00 36.25 C
ATOM 10 O3' A B 220 48.083 100.612 21.612 1.00 36.12 O
ATOM 11 C2' A B 220 49.620 100.614 23.522 1.00 33.94 C
ATOM 12 O2' A B 220 48.488 101.018 24.257 1.00 32.38 O
ATOM 13 C1' A B 220 50.312 99.441 24.226 1.00 33.05 C
ATOM 14 N9 A B 220 51.753 99.361 23.968 1.00 31.30 N
ATOM 15 C8 A B 220 52.420 98.390 23.265 1.00 29.26 C
ATOM 16 N7 A B 220 53.717 98.570 23.213 1.00 28.05 N
ATOM 17 C5 A B 220 53.920 99.740 23.925 1.00 27.71 C
ATOM 18 C6 A B 220 55.078 100.460 24.237 1.00 26.04 C
ATOM 19 N6 A B 220 56.295 100.096 23.853 1.00 28.21 N
ATOM 20 N1 A B 220 54.945 101.582 24.965 1.00 26.74 N
ATOM 21 C2 A B 220 53.721 101.956 25.344 1.00 30.86 C
ATOM 22 N3 A B 220 52.549 101.365 25.115 1.00 32.43 N
ATOM 23 C4 A B 220 52.720 100.243 24.392 1.00 31.21 C
ATOM 24 P U B 221 48.307 101.441 20.259 1.00 35.57 P
ATOM 25 OP1 U B 221 46.966 101.880 19.783 1.00 33.44 O
ATOM 26 OP2 U B 221 49.213 100.668 19.362 1.00 30.46 O
ATOM 27 O5' U B 221 49.090 102.737 20.742 1.00 37.25 O
TER

Atoms:
OP1: (44.105,102.488,33.834)
OP2: (43.017,100.914,32.124)
C3': (47.426,102.583,29.933)
C1': (48.115,100.350,29.619)
C5': (46.659,102.150,32.335)
O4': (47.846,100.536,31.001)
C8: (45.685,99.618,29.425)
O2': (49.643,102.111,29.059)
C6: (45.550,97.409,26.704)
C5: (45.767,98.296,27.765)
C4: (47.063,98.734,27.964)
P: (44.213,101.344,32.891)
C4': (47.720,101.954,31.286)
C2': (48.282,101.741,29.000)
C2: (47.820,97.534,26.277)
N1: (46.620,97.034,25.964)
N3: (48.149,98.386,27.246)
N6: (44.349,96.926,26.391)
N7: (44.907,98.856,28.699)
N9: (47.003,99.599,29.033)
O5': (45.397,101.643,31.868)
O3': (47.803,103.953,29.903)
OP1: (47.183,94.816,20.479)
OP2: (49.762,94.997,20.460)
C3': (49.187,99.961,22.221)
C1': (50.312,99.441,24.226)
C5': (48.811,97.555,21.585)
O4': (49.717,98.251,23.730)
C8: (52.420,98.390,23.265)
O2': (48.488,101.018,24.257)
C6: (55.078,100.460,24.237)
C5: (53.920,99.740,23.925)
C4: (52.720,100.243,24.392)
P: (48.469,94.983,21.211)
C4': (48.769,98.584,22.679)
C2': (49.620,100.614,23.522)
C2: (53.721,101.956,25.344)
N1: (54.945,101.582,24.965)
N3: (52.549,101.365,25.115)
N6: (56.295,100.096,23.853)
N7: (53.717,98.570,23.213)
N9: (51.753,99.361,23.968)
O5': (48.355,96.306,22.082)
O3': (48.083,100.612,21.612)
Image (generated by PyMOL):
PyMOL image
show in jmol