Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:9102:0944
Extra
PDB:
ATOM 1 O3' G A 101 41.852 60.727 113.567 1.00 45.21 O
ATOM 2 P A A 102 41.718 59.638 114.729 1.00 44.99 P
ATOM 3 OP1 A A 102 42.298 58.363 114.228 1.00 42.56 O
ATOM 4 OP2 A A 102 40.319 59.667 115.218 1.00 43.80 O
ATOM 5 O5' A A 102 42.640 60.229 115.878 1.00 43.55 O
ATOM 6 C5' A A 102 43.911 59.644 116.152 1.00 45.71 C
ATOM 7 C4' A A 102 44.977 60.290 115.306 1.00 45.76 C
ATOM 8 O4' A A 102 45.017 61.715 115.569 1.00 45.51 O
ATOM 9 C3' A A 102 46.367 59.802 115.640 1.00 46.52 C
ATOM 10 O3' A A 102 46.641 58.604 114.938 1.00 48.90 O
ATOM 11 C2' A A 102 47.238 60.975 115.226 1.00 46.07 C
ATOM 12 O2' A A 102 47.429 61.034 113.830 1.00 47.98 O
ATOM 13 C1' A A 102 46.359 62.154 115.642 1.00 45.07 C
ATOM 14 N9 A A 102 46.590 62.630 117.005 1.00 45.43 N
ATOM 15 C8 A A 102 45.663 62.695 118.013 1.00 45.79 C
ATOM 16 N7 A A 102 46.131 63.187 119.130 1.00 46.86 N
ATOM 17 C5 A A 102 47.458 63.459 118.844 1.00 46.84 C
ATOM 18 C6 A A 102 48.490 64.004 119.617 1.00 48.42 C
ATOM 19 N6 A A 102 48.333 64.396 120.887 1.00 49.78 N
ATOM 20 N1 A A 102 49.701 64.142 119.037 1.00 48.18 N
ATOM 21 C2 A A 102 49.846 63.766 117.763 1.00 47.94 C
ATOM 22 N3 A A 102 48.947 63.249 116.931 1.00 47.99 N
ATOM 23 C4 A A 102 47.758 63.117 117.541 1.00 46.29 C
ATOM 24 P A A 103 47.345 57.385 115.703 1.00 52.18 P
ATOM 25 OP1 A A 103 47.714 56.363 114.692 1.00 51.07 O
ATOM 26 OP2 A A 103 46.496 57.002 116.863 1.00 52.80 O
ATOM 27 O5' A A 103 48.686 58.033 116.253 1.00 51.12 O
TER
ATOM 1 O3' G B 943 52.191 68.812 118.748 1.00 53.20 O
ATOM 2 P A B 944 53.557 68.507 119.542 1.00 56.33 P
ATOM 3 OP1 A B 944 53.309 68.860 120.964 1.00 57.34 O
ATOM 4 OP2 A B 944 54.688 69.151 118.816 1.00 56.03 O
ATOM 5 O5' A B 944 53.725 66.927 119.425 1.00 52.26 O
ATOM 6 C5' A B 944 52.747 66.035 119.980 1.00 51.65 C
ATOM 7 C4' A B 944 53.037 64.625 119.539 1.00 51.72 C
ATOM 8 O4' A B 944 53.035 64.607 118.092 1.00 50.81 O
ATOM 9 C3' A B 944 54.406 64.092 119.934 1.00 51.70 C
ATOM 10 O3' A B 944 54.384 63.483 121.227 1.00 51.35 O
ATOM 11 C2' A B 944 54.683 63.079 118.839 1.00 52.39 C
ATOM 12 O2' A B 944 53.982 61.876 119.070 1.00 54.58 O
ATOM 13 C1' A B 944 54.086 63.789 117.620 1.00 52.22 C
ATOM 14 N9 A B 944 55.033 64.652 116.908 1.00 52.45 N
ATOM 15 C8 A B 944 55.155 66.019 117.003 1.00 52.82 C
ATOM 16 N7 A B 944 56.097 66.519 116.244 1.00 52.37 N
ATOM 17 C5 A B 944 56.632 65.411 115.604 1.00 51.51 C
ATOM 18 C6 A B 944 57.662 65.274 114.670 1.00 51.62 C
ATOM 19 N6 A B 944 58.369 66.298 114.193 1.00 52.19 N
ATOM 20 N1 A B 944 57.950 64.033 114.233 1.00 51.83 N
ATOM 21 C2 A B 944 57.239 63.007 114.707 1.00 51.84 C
ATOM 22 N3 A B 944 56.245 63.008 115.584 1.00 51.79 N
ATOM 23 C4 A B 944 55.987 64.256 116.002 1.00 51.65 C
ATOM 24 P G B 945 55.678 63.577 122.182 1.00 50.87 P
ATOM 25 OP1 G B 945 55.258 63.168 123.545 1.00 49.84 O
ATOM 26 OP2 G B 945 56.326 64.896 121.985 1.00 51.28 O
ATOM 27 O5' G B 945 56.659 62.474 121.600 1.00 48.75 O
TER
ATOM 2 P A A 102 41.718 59.638 114.729 1.00 44.99 P
ATOM 3 OP1 A A 102 42.298 58.363 114.228 1.00 42.56 O
ATOM 4 OP2 A A 102 40.319 59.667 115.218 1.00 43.80 O
ATOM 5 O5' A A 102 42.640 60.229 115.878 1.00 43.55 O
ATOM 6 C5' A A 102 43.911 59.644 116.152 1.00 45.71 C
ATOM 7 C4' A A 102 44.977 60.290 115.306 1.00 45.76 C
ATOM 8 O4' A A 102 45.017 61.715 115.569 1.00 45.51 O
ATOM 9 C3' A A 102 46.367 59.802 115.640 1.00 46.52 C
ATOM 10 O3' A A 102 46.641 58.604 114.938 1.00 48.90 O
ATOM 11 C2' A A 102 47.238 60.975 115.226 1.00 46.07 C
ATOM 12 O2' A A 102 47.429 61.034 113.830 1.00 47.98 O
ATOM 13 C1' A A 102 46.359 62.154 115.642 1.00 45.07 C
ATOM 14 N9 A A 102 46.590 62.630 117.005 1.00 45.43 N
ATOM 15 C8 A A 102 45.663 62.695 118.013 1.00 45.79 C
ATOM 16 N7 A A 102 46.131 63.187 119.130 1.00 46.86 N
ATOM 17 C5 A A 102 47.458 63.459 118.844 1.00 46.84 C
ATOM 18 C6 A A 102 48.490 64.004 119.617 1.00 48.42 C
ATOM 19 N6 A A 102 48.333 64.396 120.887 1.00 49.78 N
ATOM 20 N1 A A 102 49.701 64.142 119.037 1.00 48.18 N
ATOM 21 C2 A A 102 49.846 63.766 117.763 1.00 47.94 C
ATOM 22 N3 A A 102 48.947 63.249 116.931 1.00 47.99 N
ATOM 23 C4 A A 102 47.758 63.117 117.541 1.00 46.29 C
ATOM 24 P A A 103 47.345 57.385 115.703 1.00 52.18 P
ATOM 25 OP1 A A 103 47.714 56.363 114.692 1.00 51.07 O
ATOM 26 OP2 A A 103 46.496 57.002 116.863 1.00 52.80 O
ATOM 27 O5' A A 103 48.686 58.033 116.253 1.00 51.12 O
TER
ATOM 1 O3' G B 943 52.191 68.812 118.748 1.00 53.20 O
ATOM 2 P A B 944 53.557 68.507 119.542 1.00 56.33 P
ATOM 3 OP1 A B 944 53.309 68.860 120.964 1.00 57.34 O
ATOM 4 OP2 A B 944 54.688 69.151 118.816 1.00 56.03 O
ATOM 5 O5' A B 944 53.725 66.927 119.425 1.00 52.26 O
ATOM 6 C5' A B 944 52.747 66.035 119.980 1.00 51.65 C
ATOM 7 C4' A B 944 53.037 64.625 119.539 1.00 51.72 C
ATOM 8 O4' A B 944 53.035 64.607 118.092 1.00 50.81 O
ATOM 9 C3' A B 944 54.406 64.092 119.934 1.00 51.70 C
ATOM 10 O3' A B 944 54.384 63.483 121.227 1.00 51.35 O
ATOM 11 C2' A B 944 54.683 63.079 118.839 1.00 52.39 C
ATOM 12 O2' A B 944 53.982 61.876 119.070 1.00 54.58 O
ATOM 13 C1' A B 944 54.086 63.789 117.620 1.00 52.22 C
ATOM 14 N9 A B 944 55.033 64.652 116.908 1.00 52.45 N
ATOM 15 C8 A B 944 55.155 66.019 117.003 1.00 52.82 C
ATOM 16 N7 A B 944 56.097 66.519 116.244 1.00 52.37 N
ATOM 17 C5 A B 944 56.632 65.411 115.604 1.00 51.51 C
ATOM 18 C6 A B 944 57.662 65.274 114.670 1.00 51.62 C
ATOM 19 N6 A B 944 58.369 66.298 114.193 1.00 52.19 N
ATOM 20 N1 A B 944 57.950 64.033 114.233 1.00 51.83 N
ATOM 21 C2 A B 944 57.239 63.007 114.707 1.00 51.84 C
ATOM 22 N3 A B 944 56.245 63.008 115.584 1.00 51.79 N
ATOM 23 C4 A B 944 55.987 64.256 116.002 1.00 51.65 C
ATOM 24 P G B 945 55.678 63.577 122.182 1.00 50.87 P
ATOM 25 OP1 G B 945 55.258 63.168 123.545 1.00 49.84 O
ATOM 26 OP2 G B 945 56.326 64.896 121.985 1.00 51.28 O
ATOM 27 O5' G B 945 56.659 62.474 121.600 1.00 48.75 O
TER
Atoms:
OP1: (42.298,58.363,114.228)
OP2: (40.319,59.667,115.218)
C3': (46.367,59.802,115.640)
C1': (46.359,62.154,115.642)
C5': (43.911,59.644,116.152)
O4': (45.017,61.715,115.569)
C8: (45.663,62.695,118.013)
O2': (47.429,61.034,113.830)
C6: (48.490,64.004,119.617)
C5: (47.458,63.459,118.844)
C4: (47.758,63.117,117.541)
P: (41.718,59.638,114.729)
C4': (44.977,60.290,115.306)
C2': (47.238,60.975,115.226)
C2: (49.846,63.766,117.763)
N1: (49.701,64.142,119.037)
N3: (48.947,63.249,116.931)
N6: (48.333,64.396,120.887)
N7: (46.131,63.187,119.130)
N9: (46.590,62.630,117.005)
O5': (42.640,60.229,115.878)
O3': (46.641,58.604,114.938)
OP2: (40.319,59.667,115.218)
C3': (46.367,59.802,115.640)
C1': (46.359,62.154,115.642)
C5': (43.911,59.644,116.152)
O4': (45.017,61.715,115.569)
C8: (45.663,62.695,118.013)
O2': (47.429,61.034,113.830)
C6: (48.490,64.004,119.617)
C5: (47.458,63.459,118.844)
C4: (47.758,63.117,117.541)
P: (41.718,59.638,114.729)
C4': (44.977,60.290,115.306)
C2': (47.238,60.975,115.226)
C2: (49.846,63.766,117.763)
N1: (49.701,64.142,119.037)
N3: (48.947,63.249,116.931)
N6: (48.333,64.396,120.887)
N7: (46.131,63.187,119.130)
N9: (46.590,62.630,117.005)
O5': (42.640,60.229,115.878)
O3': (46.641,58.604,114.938)
OP1: (53.309,68.860,120.964)
OP2: (54.688,69.151,118.816)
C3': (54.406,64.092,119.934)
C1': (54.086,63.789,117.620)
C5': (52.747,66.035,119.980)
O4': (53.035,64.607,118.092)
C8: (55.155,66.019,117.003)
O2': (53.982,61.876,119.070)
C6: (57.662,65.274,114.670)
C5: (56.632,65.411,115.604)
C4: (55.987,64.256,116.002)
P: (53.557,68.507,119.542)
C4': (53.037,64.625,119.539)
C2': (54.683,63.079,118.839)
C2: (57.239,63.007,114.707)
N1: (57.950,64.033,114.233)
N3: (56.245,63.008,115.584)
N6: (58.369,66.298,114.193)
N7: (56.097,66.519,116.244)
N9: (55.033,64.652,116.908)
O5': (53.725,66.927,119.425)
O3': (54.384,63.483,121.227)
OP2: (54.688,69.151,118.816)
C3': (54.406,64.092,119.934)
C1': (54.086,63.789,117.620)
C5': (52.747,66.035,119.980)
O4': (53.035,64.607,118.092)
C8: (55.155,66.019,117.003)
O2': (53.982,61.876,119.070)
C6: (57.662,65.274,114.670)
C5: (56.632,65.411,115.604)
C4: (55.987,64.256,116.002)
P: (53.557,68.507,119.542)
C4': (53.037,64.625,119.539)
C2': (54.683,63.079,118.839)
C2: (57.239,63.007,114.707)
N1: (57.950,64.033,114.233)
N3: (56.245,63.008,115.584)
N6: (58.369,66.298,114.193)
N7: (56.097,66.519,116.244)
N9: (55.033,64.652,116.908)
O5': (53.725,66.927,119.425)
O3': (54.384,63.483,121.227)
Image (generated by PyMOL):