Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1070:A1087
Extra
PDB:
ATOM 1 O3' A A1069 -63.674 114.116 52.878 1.00 69.54 O
ATOM 2 P A A1070 -62.227 113.756 52.269 1.00 67.61 P
ATOM 3 OP1 A A1070 -61.228 113.949 53.354 1.00 78.99 O
ATOM 4 OP2 A A1070 -62.063 114.485 50.984 1.00 76.97 O
ATOM 5 O5' A A1070 -62.316 112.198 51.941 1.00 65.93 O
ATOM 6 C5' A A1070 -62.480 111.221 52.992 1.00 67.36 C
ATOM 7 C4' A A1070 -62.740 109.852 52.401 1.00 67.51 C
ATOM 8 O4' A A1070 -64.015 109.856 51.709 1.00 67.84 O
ATOM 9 C3' A A1070 -61.723 109.376 51.373 1.00 67.13 C
ATOM 10 O3' A A1070 -60.648 108.702 52.023 1.00 66.86 O
ATOM 11 C2' A A1070 -62.530 108.415 50.503 1.00 67.41 C
ATOM 12 O2' A A1070 -62.543 107.099 51.020 1.00 67.62 O
ATOM 13 C1' A A1070 -63.939 109.026 50.562 1.00 67.21 C
ATOM 14 N9 A A1070 -64.319 109.824 49.389 1.00 77.89 N
ATOM 15 C8 A A1070 -63.957 111.117 49.112 1.00 77.26 C
ATOM 16 N7 A A1070 -64.439 111.572 47.983 1.00 75.81 N
ATOM 17 C5 A A1070 -65.174 110.509 47.480 1.00 76.56 C
ATOM 18 C6 A A1070 -65.927 110.354 46.301 1.00 77.35 C
ATOM 19 N6 A A1070 -66.060 111.307 45.378 1.00 77.74 N
ATOM 20 N1 A A1070 -66.541 109.171 46.098 1.00 77.80 N
ATOM 21 C2 A A1070 -66.398 108.213 47.017 1.00 78.16 C
ATOM 22 N3 A A1070 -65.714 108.234 48.161 1.00 77.09 N
ATOM 23 C4 A A1070 -65.116 109.427 48.336 1.00 77.36 C
ATOM 24 P G A1071 -59.140 109.231 51.843 1.00 77.14 P
ATOM 25 OP1 G A1071 -58.426 109.087 53.141 1.00 75.54 O
ATOM 26 OP2 G A1071 -59.212 110.563 51.199 1.00 74.79 O
ATOM 27 O5' G A1071 -58.500 108.217 50.790 1.00 36.10 O
TER
ATOM 1 O3' C B1086 -69.988 105.337 50.517 1.00 39.71 O
ATOM 2 P A B1087 -71.466 105.297 49.857 1.00 54.38 P
ATOM 3 OP1 A B1087 -72.230 106.367 50.521 1.00 55.26 O
ATOM 4 OP2 A B1087 -72.035 103.913 49.819 1.00 55.73 O
ATOM 5 O5' A B1087 -71.204 105.741 48.354 1.00 55.60 O
ATOM 6 C5' A B1087 -70.556 106.985 48.057 1.00 57.41 C
ATOM 7 C4' A B1087 -70.235 107.057 46.585 1.00 59.94 C
ATOM 8 O4' A B1087 -69.207 106.082 46.266 1.00 61.01 O
ATOM 9 C3' A B1087 -71.392 106.701 45.671 1.00 60.98 C
ATOM 10 O3' A B1087 -72.254 107.797 45.442 1.00 62.53 O
ATOM 11 C2' A B1087 -70.696 106.211 44.408 1.00 60.86 C
ATOM 12 O2' A B1087 -70.309 107.259 43.538 1.00 61.46 O
ATOM 13 C1' A B1087 -69.466 105.508 44.993 1.00 59.57 C
ATOM 14 N9 A B1087 -69.681 104.070 45.181 1.00 94.66 N
ATOM 15 C8 A B1087 -70.304 103.438 46.235 1.00 93.67 C
ATOM 16 N7 A B1087 -70.368 102.136 46.107 1.00 92.25 N
ATOM 17 C5 A B1087 -69.741 101.889 44.892 1.00 92.12 C
ATOM 18 C6 A B1087 -69.482 100.701 44.183 1.00 91.44 C
ATOM 19 N6 A B1087 -69.837 99.487 44.613 1.00 92.22 N
ATOM 20 N1 A B1087 -68.835 100.804 43.002 1.00 90.15 N
ATOM 21 C2 A B1087 -68.475 102.019 42.571 1.00 89.89 C
ATOM 22 N3 A B1087 -68.660 103.205 43.144 1.00 90.99 N
ATOM 23 C4 A B1087 -69.307 103.070 44.315 1.00 92.74 C
ATOM 24 P A B1088 -73.819 107.529 45.233 1.00 47.47 P
ATOM 25 OP1 A B1088 -74.442 108.834 44.903 1.00 56.78 O
ATOM 26 OP2 A B1088 -74.341 106.736 46.383 1.00 54.36 O
ATOM 27 O5' A B1088 -73.859 106.608 43.933 1.00 92.77 O
TER
ATOM 2 P A A1070 -62.227 113.756 52.269 1.00 67.61 P
ATOM 3 OP1 A A1070 -61.228 113.949 53.354 1.00 78.99 O
ATOM 4 OP2 A A1070 -62.063 114.485 50.984 1.00 76.97 O
ATOM 5 O5' A A1070 -62.316 112.198 51.941 1.00 65.93 O
ATOM 6 C5' A A1070 -62.480 111.221 52.992 1.00 67.36 C
ATOM 7 C4' A A1070 -62.740 109.852 52.401 1.00 67.51 C
ATOM 8 O4' A A1070 -64.015 109.856 51.709 1.00 67.84 O
ATOM 9 C3' A A1070 -61.723 109.376 51.373 1.00 67.13 C
ATOM 10 O3' A A1070 -60.648 108.702 52.023 1.00 66.86 O
ATOM 11 C2' A A1070 -62.530 108.415 50.503 1.00 67.41 C
ATOM 12 O2' A A1070 -62.543 107.099 51.020 1.00 67.62 O
ATOM 13 C1' A A1070 -63.939 109.026 50.562 1.00 67.21 C
ATOM 14 N9 A A1070 -64.319 109.824 49.389 1.00 77.89 N
ATOM 15 C8 A A1070 -63.957 111.117 49.112 1.00 77.26 C
ATOM 16 N7 A A1070 -64.439 111.572 47.983 1.00 75.81 N
ATOM 17 C5 A A1070 -65.174 110.509 47.480 1.00 76.56 C
ATOM 18 C6 A A1070 -65.927 110.354 46.301 1.00 77.35 C
ATOM 19 N6 A A1070 -66.060 111.307 45.378 1.00 77.74 N
ATOM 20 N1 A A1070 -66.541 109.171 46.098 1.00 77.80 N
ATOM 21 C2 A A1070 -66.398 108.213 47.017 1.00 78.16 C
ATOM 22 N3 A A1070 -65.714 108.234 48.161 1.00 77.09 N
ATOM 23 C4 A A1070 -65.116 109.427 48.336 1.00 77.36 C
ATOM 24 P G A1071 -59.140 109.231 51.843 1.00 77.14 P
ATOM 25 OP1 G A1071 -58.426 109.087 53.141 1.00 75.54 O
ATOM 26 OP2 G A1071 -59.212 110.563 51.199 1.00 74.79 O
ATOM 27 O5' G A1071 -58.500 108.217 50.790 1.00 36.10 O
TER
ATOM 1 O3' C B1086 -69.988 105.337 50.517 1.00 39.71 O
ATOM 2 P A B1087 -71.466 105.297 49.857 1.00 54.38 P
ATOM 3 OP1 A B1087 -72.230 106.367 50.521 1.00 55.26 O
ATOM 4 OP2 A B1087 -72.035 103.913 49.819 1.00 55.73 O
ATOM 5 O5' A B1087 -71.204 105.741 48.354 1.00 55.60 O
ATOM 6 C5' A B1087 -70.556 106.985 48.057 1.00 57.41 C
ATOM 7 C4' A B1087 -70.235 107.057 46.585 1.00 59.94 C
ATOM 8 O4' A B1087 -69.207 106.082 46.266 1.00 61.01 O
ATOM 9 C3' A B1087 -71.392 106.701 45.671 1.00 60.98 C
ATOM 10 O3' A B1087 -72.254 107.797 45.442 1.00 62.53 O
ATOM 11 C2' A B1087 -70.696 106.211 44.408 1.00 60.86 C
ATOM 12 O2' A B1087 -70.309 107.259 43.538 1.00 61.46 O
ATOM 13 C1' A B1087 -69.466 105.508 44.993 1.00 59.57 C
ATOM 14 N9 A B1087 -69.681 104.070 45.181 1.00 94.66 N
ATOM 15 C8 A B1087 -70.304 103.438 46.235 1.00 93.67 C
ATOM 16 N7 A B1087 -70.368 102.136 46.107 1.00 92.25 N
ATOM 17 C5 A B1087 -69.741 101.889 44.892 1.00 92.12 C
ATOM 18 C6 A B1087 -69.482 100.701 44.183 1.00 91.44 C
ATOM 19 N6 A B1087 -69.837 99.487 44.613 1.00 92.22 N
ATOM 20 N1 A B1087 -68.835 100.804 43.002 1.00 90.15 N
ATOM 21 C2 A B1087 -68.475 102.019 42.571 1.00 89.89 C
ATOM 22 N3 A B1087 -68.660 103.205 43.144 1.00 90.99 N
ATOM 23 C4 A B1087 -69.307 103.070 44.315 1.00 92.74 C
ATOM 24 P A B1088 -73.819 107.529 45.233 1.00 47.47 P
ATOM 25 OP1 A B1088 -74.442 108.834 44.903 1.00 56.78 O
ATOM 26 OP2 A B1088 -74.341 106.736 46.383 1.00 54.36 O
ATOM 27 O5' A B1088 -73.859 106.608 43.933 1.00 92.77 O
TER
Atoms:
OP1: (-61.228,113.949,53.354)
OP2: (-62.063,114.485,50.984)
C3': (-61.723,109.376,51.373)
C1': (-63.939,109.026,50.562)
C5': (-62.480,111.221,52.992)
O4': (-64.015,109.856,51.709)
C8: (-63.957,111.117,49.112)
O2': (-62.543,107.099,51.020)
C6: (-65.927,110.354,46.301)
C5: (-65.174,110.509,47.480)
C4: (-65.116,109.427,48.336)
P: (-62.227,113.756,52.269)
C4': (-62.740,109.852,52.401)
C2': (-62.530,108.415,50.503)
C2: (-66.398,108.213,47.017)
N1: (-66.541,109.171,46.098)
N3: (-65.714,108.234,48.161)
N6: (-66.060,111.307,45.378)
N7: (-64.439,111.572,47.983)
N9: (-64.319,109.824,49.389)
O5': (-62.316,112.198,51.941)
O3': (-60.648,108.702,52.023)
OP2: (-62.063,114.485,50.984)
C3': (-61.723,109.376,51.373)
C1': (-63.939,109.026,50.562)
C5': (-62.480,111.221,52.992)
O4': (-64.015,109.856,51.709)
C8: (-63.957,111.117,49.112)
O2': (-62.543,107.099,51.020)
C6: (-65.927,110.354,46.301)
C5: (-65.174,110.509,47.480)
C4: (-65.116,109.427,48.336)
P: (-62.227,113.756,52.269)
C4': (-62.740,109.852,52.401)
C2': (-62.530,108.415,50.503)
C2: (-66.398,108.213,47.017)
N1: (-66.541,109.171,46.098)
N3: (-65.714,108.234,48.161)
N6: (-66.060,111.307,45.378)
N7: (-64.439,111.572,47.983)
N9: (-64.319,109.824,49.389)
O5': (-62.316,112.198,51.941)
O3': (-60.648,108.702,52.023)
OP1: (-72.230,106.367,50.521)
OP2: (-72.035,103.913,49.819)
C3': (-71.392,106.701,45.671)
C1': (-69.466,105.508,44.993)
C5': (-70.556,106.985,48.057)
O4': (-69.207,106.082,46.266)
C8: (-70.304,103.438,46.235)
O2': (-70.309,107.259,43.538)
C6: (-69.482,100.701,44.183)
C5: (-69.741,101.889,44.892)
C4: (-69.307,103.070,44.315)
P: (-71.466,105.297,49.857)
C4': (-70.235,107.057,46.585)
C2': (-70.696,106.211,44.408)
C2: (-68.475,102.019,42.571)
N1: (-68.835,100.804,43.002)
N3: (-68.660,103.205,43.144)
N6: (-69.837,99.487,44.613)
N7: (-70.368,102.136,46.107)
N9: (-69.681,104.070,45.181)
O5': (-71.204,105.741,48.354)
O3': (-72.254,107.797,45.442)
OP2: (-72.035,103.913,49.819)
C3': (-71.392,106.701,45.671)
C1': (-69.466,105.508,44.993)
C5': (-70.556,106.985,48.057)
O4': (-69.207,106.082,46.266)
C8: (-70.304,103.438,46.235)
O2': (-70.309,107.259,43.538)
C6: (-69.482,100.701,44.183)
C5: (-69.741,101.889,44.892)
C4: (-69.307,103.070,44.315)
P: (-71.466,105.297,49.857)
C4': (-70.235,107.057,46.585)
C2': (-70.696,106.211,44.408)
C2: (-68.475,102.019,42.571)
N1: (-68.835,100.804,43.002)
N3: (-68.660,103.205,43.144)
N6: (-69.837,99.487,44.613)
N7: (-70.368,102.136,46.107)
N9: (-69.681,104.070,45.181)
O5': (-71.204,105.741,48.354)
O3': (-72.254,107.797,45.442)
Image (generated by PyMOL):