ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1LNG:B36:B85

Extra

PDB:
ATOM 1 O3' U A 35 19.329 -3.651 69.437 1.00 56.99 O
ATOM 2 P A A 36 18.990 -3.452 70.992 1.00 58.97 P
ATOM 3 OP1 A A 36 19.707 -4.513 71.733 1.00 59.29 O
ATOM 4 OP2 A A 36 17.522 -3.337 71.138 1.00 59.44 O
ATOM 5 O5' A A 36 19.600 -2.024 71.407 1.00 58.92 O
ATOM 6 C5' A A 36 20.562 -1.336 70.624 1.00 59.45 C
ATOM 7 C4' A A 36 21.832 -1.134 71.427 1.00 59.91 C
ATOM 8 O4' A A 36 22.265 -2.416 71.942 1.00 60.00 O
ATOM 9 C3' A A 36 22.997 -0.522 70.655 1.00 59.88 C
ATOM 10 O3' A A 36 23.258 0.775 71.225 1.00 59.41 O
ATOM 11 C2' A A 36 24.143 -1.526 70.815 1.00 60.41 C
ATOM 12 O2' A A 36 25.073 -1.102 71.793 1.00 61.45 O
ATOM 13 C1' A A 36 23.497 -2.793 71.355 1.00 59.83 C
ATOM 14 N9 A A 36 23.303 -3.958 70.470 1.00 59.03 N
ATOM 15 C8 A A 36 22.244 -4.244 69.648 1.00 58.45 C
ATOM 16 N7 A A 36 22.348 -5.390 69.015 1.00 57.33 N
ATOM 17 C5 A A 36 23.554 -5.903 69.455 1.00 57.29 C
ATOM 18 C6 A A 36 24.244 -7.094 69.166 1.00 57.22 C
ATOM 19 N6 A A 36 23.793 -8.023 68.320 1.00 57.22 N
ATOM 20 N1 A A 36 25.427 -7.299 69.776 1.00 57.00 N
ATOM 21 C2 A A 36 25.880 -6.372 70.623 1.00 57.42 C
ATOM 22 N3 A A 36 25.325 -5.219 70.979 1.00 57.58 N
ATOM 23 C4 A A 36 24.152 -5.039 70.352 1.00 58.23 C
ATOM 24 P A A 37 24.551 1.695 70.964 1.00 59.54 P
ATOM 25 OP1 A A 37 25.706 1.072 71.647 1.00 59.66 O
ATOM 26 OP2 A A 37 24.200 3.090 71.320 1.00 59.59 O
ATOM 27 O5' A A 37 24.810 1.659 69.393 1.00 58.49 O
TER

ATOM 1 O3' U B 84 29.177 -3.397 73.869 1.00 39.80 O
ATOM 2 P A B 85 29.279 -3.979 75.359 1.00 38.70 P
ATOM 3 OP1 A B 85 28.354 -3.152 76.150 1.00 39.09 O
ATOM 4 OP2 A B 85 30.705 -4.136 75.731 1.00 38.24 O
ATOM 5 O5' A B 85 28.595 -5.411 75.215 1.00 40.40 O
ATOM 6 C5' A B 85 27.282 -5.433 74.687 1.00 43.14 C
ATOM 7 C4' A B 85 26.804 -6.843 74.425 1.00 45.35 C
ATOM 8 O4' A B 85 27.370 -7.381 73.202 1.00 44.84 O
ATOM 9 C3' A B 85 27.185 -7.852 75.491 1.00 46.97 C
ATOM 10 O3' A B 85 26.287 -7.699 76.570 1.00 49.82 O
ATOM 11 C2' A B 85 26.899 -9.125 74.708 1.00 46.34 C
ATOM 12 O2' A B 85 25.502 -9.349 74.609 1.00 46.39 O
ATOM 13 C1' A B 85 27.503 -8.779 73.348 1.00 44.75 C
ATOM 14 N9 A B 85 28.927 -9.069 73.255 1.00 43.78 N
ATOM 15 C8 A B 85 29.946 -8.179 73.447 1.00 43.17 C
ATOM 16 N7 A B 85 31.139 -8.695 73.307 1.00 42.69 N
ATOM 17 C5 A B 85 30.885 -10.018 72.999 1.00 42.79 C
ATOM 18 C6 A B 85 31.739 -11.101 72.734 1.00 42.53 C
ATOM 19 N6 A B 85 33.069 -10.991 72.736 1.00 42.49 N
ATOM 20 N1 A B 85 31.176 -12.294 72.457 1.00 42.56 N
ATOM 21 C2 A B 85 29.842 -12.391 72.460 1.00 42.80 C
ATOM 22 N3 A B 85 28.935 -11.447 72.700 1.00 43.08 N
ATOM 23 C4 A B 85 29.528 -10.271 72.962 1.00 43.28 C
ATOM 24 P G B 86 26.732 -7.795 78.101 1.00 53.08 P
ATOM 25 OP1 G B 86 25.457 -7.932 78.853 1.00 51.93 O
ATOM 26 OP2 G B 86 27.658 -6.663 78.386 1.00 52.68 O
ATOM 27 O5' G B 86 27.613 -9.141 78.222 1.00 53.63 O
TER

Atoms:
OP1: (19.707,-4.513,71.733)
OP2: (17.522,-3.337,71.138)
C3': (22.997,-0.522,70.655)
C1': (23.497,-2.793,71.355)
C5': (20.562,-1.336,70.624)
O4': (22.265,-2.416,71.942)
C8: (22.244,-4.244,69.648)
O2': (25.073,-1.102,71.793)
C6: (24.244,-7.094,69.166)
C5: (23.554,-5.903,69.455)
C4: (24.152,-5.039,70.352)
P: (18.990,-3.452,70.992)
C4': (21.832,-1.134,71.427)
C2': (24.143,-1.526,70.815)
C2: (25.880,-6.372,70.623)
N1: (25.427,-7.299,69.776)
N3: (25.325,-5.219,70.979)
N6: (23.793,-8.023,68.320)
N7: (22.348,-5.390,69.015)
N9: (23.303,-3.958,70.470)
O5': (19.600,-2.024,71.407)
O3': (23.258,0.775,71.225)
OP1: (28.354,-3.152,76.150)
OP2: (30.705,-4.136,75.731)
C3': (27.185,-7.852,75.491)
C1': (27.503,-8.779,73.348)
C5': (27.282,-5.433,74.687)
O4': (27.370,-7.381,73.202)
C8: (29.946,-8.179,73.447)
O2': (25.502,-9.349,74.609)
C6: (31.739,-11.101,72.734)
C5: (30.885,-10.018,72.999)
C4: (29.528,-10.271,72.962)
P: (29.279,-3.979,75.359)
C4': (26.804,-6.843,74.425)
C2': (26.899,-9.125,74.708)
C2: (29.842,-12.391,72.460)
N1: (31.176,-12.294,72.457)
N3: (28.935,-11.447,72.700)
N6: (33.069,-10.991,72.736)
N7: (31.139,-8.695,73.307)
N9: (28.927,-9.069,73.255)
O5': (28.595,-5.411,75.215)
O3': (26.287,-7.699,76.570)
Image (generated by PyMOL):
PyMOL image
show in jmol