Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01218:01045
Extra
PDB:
ATOM 1 O3' G A1217 17.177 104.073 108.601 1.00 38.88 O
ATOM 2 P A A1218 16.560 103.982 107.121 1.00 41.84 P
ATOM 3 OP1 A A1218 16.779 105.297 106.461 1.00 39.18 O
ATOM 4 OP2 A A1218 15.182 103.412 107.178 1.00 42.54 O
ATOM 5 O5' A A1218 17.484 102.904 106.409 1.00 38.90 O
ATOM 6 C5' A A1218 17.082 102.310 105.175 1.00 37.19 C
ATOM 7 C4' A A1218 18.260 102.194 104.244 1.00 37.35 C
ATOM 8 O4' A A1218 19.286 101.361 104.836 1.00 36.13 O
ATOM 9 C3' A A1218 17.930 101.521 102.929 1.00 37.08 C
ATOM 10 O3' A A1218 17.423 102.497 102.036 1.00 36.44 O
ATOM 11 C2' A A1218 19.280 100.980 102.502 1.00 36.02 C
ATOM 12 O2' A A1218 20.092 102.022 102.012 1.00 39.88 O
ATOM 13 C1' A A1218 19.852 100.527 103.844 1.00 35.29 C
ATOM 14 N9 A A1218 19.526 99.148 104.197 1.00 34.98 N
ATOM 15 C8 A A1218 18.465 98.721 104.954 1.00 35.90 C
ATOM 16 N7 A A1218 18.432 97.424 105.134 1.00 36.60 N
ATOM 17 C5 A A1218 19.540 96.963 104.446 1.00 33.13 C
ATOM 18 C6 A A1218 20.054 95.677 104.253 1.00 33.30 C
ATOM 19 N6 A A1218 19.505 94.578 104.771 1.00 32.40 N
ATOM 20 N1 A A1218 21.169 95.553 103.502 1.00 34.79 N
ATOM 21 C2 A A1218 21.724 96.662 102.993 1.00 35.91 C
ATOM 22 N3 A A1218 21.334 97.931 103.110 1.00 34.20 N
ATOM 23 C4 A A1218 20.221 98.013 103.856 1.00 34.79 C
ATOM 24 P G A1219 16.179 102.148 101.091 1.00 35.38 P
ATOM 25 OP1 G A1219 15.536 103.434 100.742 1.00 35.78 O
ATOM 26 OP2 G A1219 15.381 101.071 101.734 1.00 38.24 O
ATOM 27 O5' G A1219 16.861 101.552 99.785 1.00 34.85 O
TER
ATOM 1 O3' C B1044 24.788 91.778 105.691 1.00 32.88 O
ATOM 2 P A B1045 24.874 90.946 104.324 1.00 34.25 P
ATOM 3 OP1 A B1045 23.758 89.969 104.280 1.00 35.20 O
ATOM 4 OP2 A B1045 26.268 90.458 104.184 1.00 35.15 O
ATOM 5 O5' A B1045 24.649 92.049 103.204 1.00 34.01 O
ATOM 6 C5' A B1045 23.425 92.789 103.099 1.00 32.51 C
ATOM 7 C4' A B1045 23.576 93.848 102.036 1.00 35.01 C
ATOM 8 O4' A B1045 24.584 94.804 102.468 1.00 38.01 O
ATOM 9 C3' A B1045 24.091 93.328 100.702 1.00 34.02 C
ATOM 10 O3' A B1045 23.021 92.853 99.895 1.00 35.51 O
ATOM 11 C2' A B1045 24.774 94.554 100.113 1.00 34.84 C
ATOM 12 O2' A B1045 23.870 95.472 99.553 1.00 35.33 O
ATOM 13 C1' A B1045 25.384 95.193 101.364 1.00 36.40 C
ATOM 14 N9 A B1045 26.756 94.755 101.623 1.00 36.55 N
ATOM 15 C8 A B1045 27.172 93.716 102.413 1.00 35.03 C
ATOM 16 N7 A B1045 28.469 93.562 102.443 1.00 35.95 N
ATOM 17 C5 A B1045 28.942 94.571 101.619 1.00 36.17 C
ATOM 18 C6 A B1045 30.238 94.957 101.249 1.00 35.64 C
ATOM 19 N6 A B1045 31.341 94.345 101.676 1.00 33.01 N
ATOM 20 N1 A B1045 30.364 96.011 100.417 1.00 35.19 N
ATOM 21 C2 A B1045 29.260 96.630 100.000 1.00 35.66 C
ATOM 22 N3 A B1045 27.990 96.366 100.281 1.00 37.19 N
ATOM 23 C4 A B1045 27.898 95.312 101.107 1.00 36.36 C
ATOM 24 P G B1046 23.085 91.376 99.257 1.00 39.83 P
ATOM 25 OP1 G B1046 21.699 90.855 99.255 1.00 40.24 O
ATOM 26 OP2 G B1046 24.160 90.586 99.903 1.00 38.08 O
ATOM 27 O5' G B1046 23.504 91.631 97.741 1.00 38.38 O
TER
ATOM 2 P A A1218 16.560 103.982 107.121 1.00 41.84 P
ATOM 3 OP1 A A1218 16.779 105.297 106.461 1.00 39.18 O
ATOM 4 OP2 A A1218 15.182 103.412 107.178 1.00 42.54 O
ATOM 5 O5' A A1218 17.484 102.904 106.409 1.00 38.90 O
ATOM 6 C5' A A1218 17.082 102.310 105.175 1.00 37.19 C
ATOM 7 C4' A A1218 18.260 102.194 104.244 1.00 37.35 C
ATOM 8 O4' A A1218 19.286 101.361 104.836 1.00 36.13 O
ATOM 9 C3' A A1218 17.930 101.521 102.929 1.00 37.08 C
ATOM 10 O3' A A1218 17.423 102.497 102.036 1.00 36.44 O
ATOM 11 C2' A A1218 19.280 100.980 102.502 1.00 36.02 C
ATOM 12 O2' A A1218 20.092 102.022 102.012 1.00 39.88 O
ATOM 13 C1' A A1218 19.852 100.527 103.844 1.00 35.29 C
ATOM 14 N9 A A1218 19.526 99.148 104.197 1.00 34.98 N
ATOM 15 C8 A A1218 18.465 98.721 104.954 1.00 35.90 C
ATOM 16 N7 A A1218 18.432 97.424 105.134 1.00 36.60 N
ATOM 17 C5 A A1218 19.540 96.963 104.446 1.00 33.13 C
ATOM 18 C6 A A1218 20.054 95.677 104.253 1.00 33.30 C
ATOM 19 N6 A A1218 19.505 94.578 104.771 1.00 32.40 N
ATOM 20 N1 A A1218 21.169 95.553 103.502 1.00 34.79 N
ATOM 21 C2 A A1218 21.724 96.662 102.993 1.00 35.91 C
ATOM 22 N3 A A1218 21.334 97.931 103.110 1.00 34.20 N
ATOM 23 C4 A A1218 20.221 98.013 103.856 1.00 34.79 C
ATOM 24 P G A1219 16.179 102.148 101.091 1.00 35.38 P
ATOM 25 OP1 G A1219 15.536 103.434 100.742 1.00 35.78 O
ATOM 26 OP2 G A1219 15.381 101.071 101.734 1.00 38.24 O
ATOM 27 O5' G A1219 16.861 101.552 99.785 1.00 34.85 O
TER
ATOM 1 O3' C B1044 24.788 91.778 105.691 1.00 32.88 O
ATOM 2 P A B1045 24.874 90.946 104.324 1.00 34.25 P
ATOM 3 OP1 A B1045 23.758 89.969 104.280 1.00 35.20 O
ATOM 4 OP2 A B1045 26.268 90.458 104.184 1.00 35.15 O
ATOM 5 O5' A B1045 24.649 92.049 103.204 1.00 34.01 O
ATOM 6 C5' A B1045 23.425 92.789 103.099 1.00 32.51 C
ATOM 7 C4' A B1045 23.576 93.848 102.036 1.00 35.01 C
ATOM 8 O4' A B1045 24.584 94.804 102.468 1.00 38.01 O
ATOM 9 C3' A B1045 24.091 93.328 100.702 1.00 34.02 C
ATOM 10 O3' A B1045 23.021 92.853 99.895 1.00 35.51 O
ATOM 11 C2' A B1045 24.774 94.554 100.113 1.00 34.84 C
ATOM 12 O2' A B1045 23.870 95.472 99.553 1.00 35.33 O
ATOM 13 C1' A B1045 25.384 95.193 101.364 1.00 36.40 C
ATOM 14 N9 A B1045 26.756 94.755 101.623 1.00 36.55 N
ATOM 15 C8 A B1045 27.172 93.716 102.413 1.00 35.03 C
ATOM 16 N7 A B1045 28.469 93.562 102.443 1.00 35.95 N
ATOM 17 C5 A B1045 28.942 94.571 101.619 1.00 36.17 C
ATOM 18 C6 A B1045 30.238 94.957 101.249 1.00 35.64 C
ATOM 19 N6 A B1045 31.341 94.345 101.676 1.00 33.01 N
ATOM 20 N1 A B1045 30.364 96.011 100.417 1.00 35.19 N
ATOM 21 C2 A B1045 29.260 96.630 100.000 1.00 35.66 C
ATOM 22 N3 A B1045 27.990 96.366 100.281 1.00 37.19 N
ATOM 23 C4 A B1045 27.898 95.312 101.107 1.00 36.36 C
ATOM 24 P G B1046 23.085 91.376 99.257 1.00 39.83 P
ATOM 25 OP1 G B1046 21.699 90.855 99.255 1.00 40.24 O
ATOM 26 OP2 G B1046 24.160 90.586 99.903 1.00 38.08 O
ATOM 27 O5' G B1046 23.504 91.631 97.741 1.00 38.38 O
TER
Atoms:
OP1: (16.779,105.297,106.461)
OP2: (15.182,103.412,107.178)
C3': (17.930,101.521,102.929)
C1': (19.852,100.527,103.844)
C5': (17.082,102.310,105.175)
O4': (19.286,101.361,104.836)
C8: (18.465,98.721,104.954)
O2': (20.092,102.022,102.012)
C6: (20.054,95.677,104.253)
C5: (19.540,96.963,104.446)
C4: (20.221,98.013,103.856)
P: (16.560,103.982,107.121)
C4': (18.260,102.194,104.244)
C2': (19.280,100.980,102.502)
C2: (21.724,96.662,102.993)
N1: (21.169,95.553,103.502)
N3: (21.334,97.931,103.110)
N6: (19.505,94.578,104.771)
N7: (18.432,97.424,105.134)
N9: (19.526,99.148,104.197)
O5': (17.484,102.904,106.409)
O3': (17.423,102.497,102.036)
OP2: (15.182,103.412,107.178)
C3': (17.930,101.521,102.929)
C1': (19.852,100.527,103.844)
C5': (17.082,102.310,105.175)
O4': (19.286,101.361,104.836)
C8: (18.465,98.721,104.954)
O2': (20.092,102.022,102.012)
C6: (20.054,95.677,104.253)
C5: (19.540,96.963,104.446)
C4: (20.221,98.013,103.856)
P: (16.560,103.982,107.121)
C4': (18.260,102.194,104.244)
C2': (19.280,100.980,102.502)
C2: (21.724,96.662,102.993)
N1: (21.169,95.553,103.502)
N3: (21.334,97.931,103.110)
N6: (19.505,94.578,104.771)
N7: (18.432,97.424,105.134)
N9: (19.526,99.148,104.197)
O5': (17.484,102.904,106.409)
O3': (17.423,102.497,102.036)
OP1: (23.758,89.969,104.280)
OP2: (26.268,90.458,104.184)
C3': (24.091,93.328,100.702)
C1': (25.384,95.193,101.364)
C5': (23.425,92.789,103.099)
O4': (24.584,94.804,102.468)
C8: (27.172,93.716,102.413)
O2': (23.870,95.472,99.553)
C6: (30.238,94.957,101.249)
C5: (28.942,94.571,101.619)
C4: (27.898,95.312,101.107)
P: (24.874,90.946,104.324)
C4': (23.576,93.848,102.036)
C2': (24.774,94.554,100.113)
C2: (29.260,96.630,100.000)
N1: (30.364,96.011,100.417)
N3: (27.990,96.366,100.281)
N6: (31.341,94.345,101.676)
N7: (28.469,93.562,102.443)
N9: (26.756,94.755,101.623)
O5': (24.649,92.049,103.204)
O3': (23.021,92.853,99.895)
OP2: (26.268,90.458,104.184)
C3': (24.091,93.328,100.702)
C1': (25.384,95.193,101.364)
C5': (23.425,92.789,103.099)
O4': (24.584,94.804,102.468)
C8: (27.172,93.716,102.413)
O2': (23.870,95.472,99.553)
C6: (30.238,94.957,101.249)
C5: (28.942,94.571,101.619)
C4: (27.898,95.312,101.107)
P: (24.874,90.946,104.324)
C4': (23.576,93.848,102.036)
C2': (24.774,94.554,100.113)
C2: (29.260,96.630,100.000)
N1: (30.364,96.011,100.417)
N3: (27.990,96.366,100.281)
N6: (31.341,94.345,101.676)
N7: (28.469,93.562,102.443)
N9: (26.756,94.755,101.623)
O5': (24.649,92.049,103.204)
O3': (23.021,92.853,99.895)
Image (generated by PyMOL):