Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21534:21579
Extra
PDB:
ATOM 1 O3' U A1533 -71.643 -74.123 32.824 1.00 84.72 O
ATOM 2 P U A1534 -71.756 -73.031 31.646 1.00 82.39 P
ATOM 3 OP1 U A1534 -73.195 -72.856 31.332 1.00 82.77 O
ATOM 4 OP2 U A1534 -70.851 -73.460 30.566 1.00 82.34 O
ATOM 5 O5' U A1534 -71.207 -71.719 32.345 1.00 81.84 O
ATOM 6 C5' U A1534 -72.046 -71.003 33.226 1.00 81.82 C
ATOM 7 C4' U A1534 -71.599 -69.585 33.409 1.00 81.31 C
ATOM 8 O4' U A1534 -70.411 -69.560 34.213 1.00 80.92 O
ATOM 9 C3' U A1534 -71.241 -68.819 32.150 1.00 81.12 C
ATOM 10 O3' U A1534 -72.382 -68.245 31.541 1.00 81.36 O
ATOM 11 C2' U A1534 -70.259 -67.779 32.657 1.00 80.55 C
ATOM 12 O2' U A1534 -70.956 -66.666 33.175 1.00 80.43 O
ATOM 13 C1' U A1534 -69.584 -68.501 33.824 1.00 80.46 C
ATOM 14 N1 U A1534 -68.260 -69.058 33.473 1.00 80.29 N
ATOM 15 C2 U A1534 -67.147 -68.383 33.870 1.00 79.81 C
ATOM 16 O2 U A1534 -67.185 -67.330 34.457 1.00 79.51 O
ATOM 17 N3 U A1534 -65.983 -68.981 33.533 1.00 79.73 N
ATOM 18 C4 U A1534 -65.790 -70.161 32.869 1.00 80.04 C
ATOM 19 O4 U A1534 -64.641 -70.543 32.652 1.00 79.92 O
ATOM 20 C5 U A1534 -66.990 -70.829 32.500 1.00 80.52 C
ATOM 21 C6 U A1534 -68.156 -70.265 32.817 1.00 80.63 C
ATOM 22 P G A1535 -72.450 -68.020 29.950 1.00 78.09 P
ATOM 23 OP1 G A1535 -73.692 -67.266 29.676 1.00 78.32 O
ATOM 24 OP2 G A1535 -72.262 -69.354 29.299 1.00 78.41 O
ATOM 25 O5' G A1535 -71.204 -67.091 29.676 1.00 77.55 O
TER
ATOM 1 O3' C B1578 -73.751 -59.445 37.269 1.00 74.41 O
ATOM 2 P A B1579 -74.734 -59.723 36.044 1.00 75.70 P
ATOM 3 OP1 A B1579 -74.347 -58.811 34.940 1.00 75.51 O
ATOM 4 OP2 A B1579 -76.110 -59.653 36.581 1.00 76.11 O
ATOM 5 O5' A B1579 -74.390 -61.217 35.648 1.00 75.93 O
ATOM 6 C5' A B1579 -75.269 -61.970 34.822 1.00 76.44 C
ATOM 7 C4' A B1579 -74.588 -63.189 34.289 1.00 76.52 C
ATOM 8 O4' A B1579 -73.542 -62.790 33.377 1.00 76.19 O
ATOM 9 C3' A B1579 -73.883 -64.025 35.325 1.00 76.39 C
ATOM 10 O3' A B1579 -74.750 -64.928 35.951 1.00 76.83 O
ATOM 11 C2' A B1579 -72.775 -64.700 34.541 1.00 76.26 C
ATOM 12 O2' A B1579 -73.258 -65.852 33.892 1.00 76.73 O
ATOM 13 C1' A B1579 -72.445 -63.656 33.487 1.00 76.03 C
ATOM 14 N9 A B1579 -71.261 -62.863 33.844 1.00 75.47 N
ATOM 15 C8 A B1579 -71.220 -61.557 34.282 1.00 75.14 C
ATOM 16 N7 A B1579 -70.003 -61.101 34.519 1.00 74.68 N
ATOM 17 C5 A B1579 -69.194 -62.196 34.221 1.00 74.71 C
ATOM 18 C6 A B1579 -67.803 -62.367 34.270 1.00 74.38 C
ATOM 19 N6 A B1579 -66.987 -61.387 34.651 1.00 73.92 N
ATOM 20 N1 A B1579 -67.292 -63.575 33.926 1.00 74.55 N
ATOM 21 C2 A B1579 -68.162 -64.525 33.541 1.00 75.03 C
ATOM 22 N3 A B1579 -69.497 -64.492 33.456 1.00 75.38 N
ATOM 23 C4 A B1579 -69.954 -63.286 33.809 1.00 75.20 C
ATOM 24 P U B1580 -74.468 -65.404 37.446 1.00 78.67 P
ATOM 25 OP1 U B1580 -75.341 -66.599 37.713 1.00 79.22 O
ATOM 26 OP2 U B1580 -74.605 -64.213 38.310 1.00 78.38 O
ATOM 27 O5' U B1580 -72.945 -65.848 37.374 1.00 78.31 O
TER
ATOM 2 P U A1534 -71.756 -73.031 31.646 1.00 82.39 P
ATOM 3 OP1 U A1534 -73.195 -72.856 31.332 1.00 82.77 O
ATOM 4 OP2 U A1534 -70.851 -73.460 30.566 1.00 82.34 O
ATOM 5 O5' U A1534 -71.207 -71.719 32.345 1.00 81.84 O
ATOM 6 C5' U A1534 -72.046 -71.003 33.226 1.00 81.82 C
ATOM 7 C4' U A1534 -71.599 -69.585 33.409 1.00 81.31 C
ATOM 8 O4' U A1534 -70.411 -69.560 34.213 1.00 80.92 O
ATOM 9 C3' U A1534 -71.241 -68.819 32.150 1.00 81.12 C
ATOM 10 O3' U A1534 -72.382 -68.245 31.541 1.00 81.36 O
ATOM 11 C2' U A1534 -70.259 -67.779 32.657 1.00 80.55 C
ATOM 12 O2' U A1534 -70.956 -66.666 33.175 1.00 80.43 O
ATOM 13 C1' U A1534 -69.584 -68.501 33.824 1.00 80.46 C
ATOM 14 N1 U A1534 -68.260 -69.058 33.473 1.00 80.29 N
ATOM 15 C2 U A1534 -67.147 -68.383 33.870 1.00 79.81 C
ATOM 16 O2 U A1534 -67.185 -67.330 34.457 1.00 79.51 O
ATOM 17 N3 U A1534 -65.983 -68.981 33.533 1.00 79.73 N
ATOM 18 C4 U A1534 -65.790 -70.161 32.869 1.00 80.04 C
ATOM 19 O4 U A1534 -64.641 -70.543 32.652 1.00 79.92 O
ATOM 20 C5 U A1534 -66.990 -70.829 32.500 1.00 80.52 C
ATOM 21 C6 U A1534 -68.156 -70.265 32.817 1.00 80.63 C
ATOM 22 P G A1535 -72.450 -68.020 29.950 1.00 78.09 P
ATOM 23 OP1 G A1535 -73.692 -67.266 29.676 1.00 78.32 O
ATOM 24 OP2 G A1535 -72.262 -69.354 29.299 1.00 78.41 O
ATOM 25 O5' G A1535 -71.204 -67.091 29.676 1.00 77.55 O
TER
ATOM 1 O3' C B1578 -73.751 -59.445 37.269 1.00 74.41 O
ATOM 2 P A B1579 -74.734 -59.723 36.044 1.00 75.70 P
ATOM 3 OP1 A B1579 -74.347 -58.811 34.940 1.00 75.51 O
ATOM 4 OP2 A B1579 -76.110 -59.653 36.581 1.00 76.11 O
ATOM 5 O5' A B1579 -74.390 -61.217 35.648 1.00 75.93 O
ATOM 6 C5' A B1579 -75.269 -61.970 34.822 1.00 76.44 C
ATOM 7 C4' A B1579 -74.588 -63.189 34.289 1.00 76.52 C
ATOM 8 O4' A B1579 -73.542 -62.790 33.377 1.00 76.19 O
ATOM 9 C3' A B1579 -73.883 -64.025 35.325 1.00 76.39 C
ATOM 10 O3' A B1579 -74.750 -64.928 35.951 1.00 76.83 O
ATOM 11 C2' A B1579 -72.775 -64.700 34.541 1.00 76.26 C
ATOM 12 O2' A B1579 -73.258 -65.852 33.892 1.00 76.73 O
ATOM 13 C1' A B1579 -72.445 -63.656 33.487 1.00 76.03 C
ATOM 14 N9 A B1579 -71.261 -62.863 33.844 1.00 75.47 N
ATOM 15 C8 A B1579 -71.220 -61.557 34.282 1.00 75.14 C
ATOM 16 N7 A B1579 -70.003 -61.101 34.519 1.00 74.68 N
ATOM 17 C5 A B1579 -69.194 -62.196 34.221 1.00 74.71 C
ATOM 18 C6 A B1579 -67.803 -62.367 34.270 1.00 74.38 C
ATOM 19 N6 A B1579 -66.987 -61.387 34.651 1.00 73.92 N
ATOM 20 N1 A B1579 -67.292 -63.575 33.926 1.00 74.55 N
ATOM 21 C2 A B1579 -68.162 -64.525 33.541 1.00 75.03 C
ATOM 22 N3 A B1579 -69.497 -64.492 33.456 1.00 75.38 N
ATOM 23 C4 A B1579 -69.954 -63.286 33.809 1.00 75.20 C
ATOM 24 P U B1580 -74.468 -65.404 37.446 1.00 78.67 P
ATOM 25 OP1 U B1580 -75.341 -66.599 37.713 1.00 79.22 O
ATOM 26 OP2 U B1580 -74.605 -64.213 38.310 1.00 78.38 O
ATOM 27 O5' U B1580 -72.945 -65.848 37.374 1.00 78.31 O
TER
Atoms:
C4: (-65.790,-70.161,32.869)
N3: (-65.983,-68.981,33.533)
OP1: (-73.195,-72.856,31.332)
OP2: (-70.851,-73.460,30.566)
C2: (-67.147,-68.383,33.870)
C1': (-69.584,-68.501,33.824)
C3': (-71.241,-68.819,32.150)
O5': (-71.207,-71.719,32.345)
O4': (-70.411,-69.560,34.213)
C5': (-72.046,-71.003,33.226)
P: (-71.756,-73.031,31.646)
C4': (-71.599,-69.585,33.409)
C2': (-70.259,-67.779,32.657)
O2': (-70.956,-66.666,33.175)
N1: (-68.260,-69.058,33.473)
O4: (-64.641,-70.543,32.652)
O2: (-67.185,-67.330,34.457)
C6: (-68.156,-70.265,32.817)
C5: (-66.990,-70.829,32.500)
O3': (-72.382,-68.245,31.541)
N3: (-65.983,-68.981,33.533)
OP1: (-73.195,-72.856,31.332)
OP2: (-70.851,-73.460,30.566)
C2: (-67.147,-68.383,33.870)
C1': (-69.584,-68.501,33.824)
C3': (-71.241,-68.819,32.150)
O5': (-71.207,-71.719,32.345)
O4': (-70.411,-69.560,34.213)
C5': (-72.046,-71.003,33.226)
P: (-71.756,-73.031,31.646)
C4': (-71.599,-69.585,33.409)
C2': (-70.259,-67.779,32.657)
O2': (-70.956,-66.666,33.175)
N1: (-68.260,-69.058,33.473)
O4: (-64.641,-70.543,32.652)
O2: (-67.185,-67.330,34.457)
C6: (-68.156,-70.265,32.817)
C5: (-66.990,-70.829,32.500)
O3': (-72.382,-68.245,31.541)
OP1: (-74.347,-58.811,34.940)
OP2: (-76.110,-59.653,36.581)
C3': (-73.883,-64.025,35.325)
C1': (-72.445,-63.656,33.487)
C5': (-75.269,-61.970,34.822)
O4': (-73.542,-62.790,33.377)
C8: (-71.220,-61.557,34.282)
O2': (-73.258,-65.852,33.892)
C6: (-67.803,-62.367,34.270)
C5: (-69.194,-62.196,34.221)
C4: (-69.954,-63.286,33.809)
P: (-74.734,-59.723,36.044)
C4': (-74.588,-63.189,34.289)
C2': (-72.775,-64.700,34.541)
C2: (-68.162,-64.525,33.541)
N1: (-67.292,-63.575,33.926)
N3: (-69.497,-64.492,33.456)
N6: (-66.987,-61.387,34.651)
N7: (-70.003,-61.101,34.519)
N9: (-71.261,-62.863,33.844)
O5': (-74.390,-61.217,35.648)
O3': (-74.750,-64.928,35.951)
OP2: (-76.110,-59.653,36.581)
C3': (-73.883,-64.025,35.325)
C1': (-72.445,-63.656,33.487)
C5': (-75.269,-61.970,34.822)
O4': (-73.542,-62.790,33.377)
C8: (-71.220,-61.557,34.282)
O2': (-73.258,-65.852,33.892)
C6: (-67.803,-62.367,34.270)
C5: (-69.194,-62.196,34.221)
C4: (-69.954,-63.286,33.809)
P: (-74.734,-59.723,36.044)
C4': (-74.588,-63.189,34.289)
C2': (-72.775,-64.700,34.541)
C2: (-68.162,-64.525,33.541)
N1: (-67.292,-63.575,33.926)
N3: (-69.497,-64.492,33.456)
N6: (-66.987,-61.387,34.651)
N7: (-70.003,-61.101,34.519)
N9: (-71.261,-62.863,33.844)
O5': (-74.390,-61.217,35.648)
O3': (-74.750,-64.928,35.951)
Image (generated by PyMOL):