Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D19:C20
Extra
PDB:
ATOM 1 O3' G A 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 2 P A A 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 3 OP1 A A 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 4 OP2 A A 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 5 O5' A A 19 8.605 -2.308 32.390 1.00 17.52 O
ATOM 6 C5' A A 19 9.157 -1.019 32.155 1.00 14.73 C
ATOM 7 C4' A A 19 10.540 -1.181 31.567 1.00 15.40 C
ATOM 8 O4' A A 19 11.315 -2.021 32.469 1.00 15.42 O
ATOM 9 C3' A A 19 10.591 -1.944 30.252 1.00 16.26 C
ATOM 10 O3' A A 19 10.346 -1.087 29.140 1.00 17.27 O
ATOM 11 C2' A A 19 12.009 -2.509 30.255 1.00 13.99 C
ATOM 12 O2' A A 19 12.997 -1.565 29.901 1.00 14.71 O
ATOM 13 C1' A A 19 12.172 -2.877 31.727 1.00 12.08 C
ATOM 14 N9 A A 19 11.797 -4.262 32.010 1.00 8.63 N
ATOM 15 C8 A A 19 10.762 -4.710 32.787 1.00 6.21 C
ATOM 16 N7 A A 19 10.659 -6.016 32.824 1.00 6.23 N
ATOM 17 C5 A A 19 11.701 -6.458 32.020 1.00 5.71 C
ATOM 18 C6 A A 19 12.128 -7.745 31.644 1.00 6.89 C
ATOM 19 N6 A A 19 11.519 -8.868 32.032 1.00 8.38 N
ATOM 20 N1 A A 19 13.211 -7.839 30.840 1.00 5.98 N
ATOM 21 C2 A A 19 13.806 -6.712 30.440 1.00 5.64 C
ATOM 22 N3 A A 19 13.492 -5.446 30.720 1.00 5.19 N
ATOM 23 C4 A A 19 12.418 -5.389 31.523 1.00 5.14 C
ATOM 24 P A A 20 9.579 -1.656 27.853 1.00 17.96 P
ATOM 25 OP1 A A 20 9.663 -0.644 26.771 1.00 18.68 O
ATOM 26 OP2 A A 20 8.267 -2.161 28.287 1.00 18.82 O
ATOM 27 O5' A A 20 10.424 -2.925 27.407 1.00 17.09 O
TER
ATOM 1 O3' A B 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 2 P A B 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 3 OP1 A B 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 4 OP2 A B 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 5 O5' A B 20 17.617 -2.861 26.751 1.00 16.27 O
ATOM 6 C5' A B 20 16.400 -2.990 27.461 1.00 14.75 C
ATOM 7 C4' A B 20 15.871 -4.380 27.284 1.00 14.63 C
ATOM 8 O4' A B 20 15.712 -4.615 25.861 1.00 12.82 O
ATOM 9 C3' A B 20 16.831 -5.474 27.709 1.00 16.15 C
ATOM 10 O3' A B 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 11 C2' A B 20 16.327 -6.657 26.895 1.00 15.51 C
ATOM 12 O2' A B 20 15.168 -7.230 27.448 1.00 18.35 O
ATOM 13 C1' A B 20 15.983 -5.978 25.568 1.00 13.93 C
ATOM 14 N9 A B 20 17.079 -6.042 24.599 1.00 12.86 N
ATOM 15 C8 A B 20 17.951 -5.049 24.222 1.00 12.67 C
ATOM 16 N7 A B 20 18.852 -5.437 23.350 1.00 12.09 N
ATOM 17 C5 A B 20 18.547 -6.773 23.130 1.00 11.65 C
ATOM 18 C6 A B 20 19.134 -7.750 22.317 1.00 10.93 C
ATOM 19 N6 A B 20 20.192 -7.522 21.541 1.00 11.26 N
ATOM 20 N1 A B 20 18.593 -8.985 22.328 1.00 9.13 N
ATOM 21 C2 A B 20 17.526 -9.213 23.112 1.00 10.35 C
ATOM 22 N3 A B 20 16.885 -8.379 23.924 1.00 10.29 N
ATOM 23 C4 A B 20 17.453 -7.158 23.887 1.00 11.46 C
ATOM 24 P C B 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 25 OP1 C B 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 26 OP2 C B 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 27 O5' C B 21 18.526 -7.443 29.496 1.00 19.40 O
TER
ATOM 2 P A A 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 3 OP1 A A 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 4 OP2 A A 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 5 O5' A A 19 8.605 -2.308 32.390 1.00 17.52 O
ATOM 6 C5' A A 19 9.157 -1.019 32.155 1.00 14.73 C
ATOM 7 C4' A A 19 10.540 -1.181 31.567 1.00 15.40 C
ATOM 8 O4' A A 19 11.315 -2.021 32.469 1.00 15.42 O
ATOM 9 C3' A A 19 10.591 -1.944 30.252 1.00 16.26 C
ATOM 10 O3' A A 19 10.346 -1.087 29.140 1.00 17.27 O
ATOM 11 C2' A A 19 12.009 -2.509 30.255 1.00 13.99 C
ATOM 12 O2' A A 19 12.997 -1.565 29.901 1.00 14.71 O
ATOM 13 C1' A A 19 12.172 -2.877 31.727 1.00 12.08 C
ATOM 14 N9 A A 19 11.797 -4.262 32.010 1.00 8.63 N
ATOM 15 C8 A A 19 10.762 -4.710 32.787 1.00 6.21 C
ATOM 16 N7 A A 19 10.659 -6.016 32.824 1.00 6.23 N
ATOM 17 C5 A A 19 11.701 -6.458 32.020 1.00 5.71 C
ATOM 18 C6 A A 19 12.128 -7.745 31.644 1.00 6.89 C
ATOM 19 N6 A A 19 11.519 -8.868 32.032 1.00 8.38 N
ATOM 20 N1 A A 19 13.211 -7.839 30.840 1.00 5.98 N
ATOM 21 C2 A A 19 13.806 -6.712 30.440 1.00 5.64 C
ATOM 22 N3 A A 19 13.492 -5.446 30.720 1.00 5.19 N
ATOM 23 C4 A A 19 12.418 -5.389 31.523 1.00 5.14 C
ATOM 24 P A A 20 9.579 -1.656 27.853 1.00 17.96 P
ATOM 25 OP1 A A 20 9.663 -0.644 26.771 1.00 18.68 O
ATOM 26 OP2 A A 20 8.267 -2.161 28.287 1.00 18.82 O
ATOM 27 O5' A A 20 10.424 -2.925 27.407 1.00 17.09 O
TER
ATOM 1 O3' A B 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 2 P A B 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 3 OP1 A B 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 4 OP2 A B 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 5 O5' A B 20 17.617 -2.861 26.751 1.00 16.27 O
ATOM 6 C5' A B 20 16.400 -2.990 27.461 1.00 14.75 C
ATOM 7 C4' A B 20 15.871 -4.380 27.284 1.00 14.63 C
ATOM 8 O4' A B 20 15.712 -4.615 25.861 1.00 12.82 O
ATOM 9 C3' A B 20 16.831 -5.474 27.709 1.00 16.15 C
ATOM 10 O3' A B 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 11 C2' A B 20 16.327 -6.657 26.895 1.00 15.51 C
ATOM 12 O2' A B 20 15.168 -7.230 27.448 1.00 18.35 O
ATOM 13 C1' A B 20 15.983 -5.978 25.568 1.00 13.93 C
ATOM 14 N9 A B 20 17.079 -6.042 24.599 1.00 12.86 N
ATOM 15 C8 A B 20 17.951 -5.049 24.222 1.00 12.67 C
ATOM 16 N7 A B 20 18.852 -5.437 23.350 1.00 12.09 N
ATOM 17 C5 A B 20 18.547 -6.773 23.130 1.00 11.65 C
ATOM 18 C6 A B 20 19.134 -7.750 22.317 1.00 10.93 C
ATOM 19 N6 A B 20 20.192 -7.522 21.541 1.00 11.26 N
ATOM 20 N1 A B 20 18.593 -8.985 22.328 1.00 9.13 N
ATOM 21 C2 A B 20 17.526 -9.213 23.112 1.00 10.35 C
ATOM 22 N3 A B 20 16.885 -8.379 23.924 1.00 10.29 N
ATOM 23 C4 A B 20 17.453 -7.158 23.887 1.00 11.46 C
ATOM 24 P C B 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 25 OP1 C B 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 26 OP2 C B 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 27 O5' C B 21 18.526 -7.443 29.496 1.00 19.40 O
TER
Atoms:
OP1: (7.094,-2.533,34.378)
OP2: (6.181,-1.666,32.145)
C3': (10.591,-1.944,30.252)
C1': (12.172,-2.877,31.727)
C5': (9.157,-1.019,32.155)
O4': (11.315,-2.021,32.469)
C8: (10.762,-4.710,32.787)
O2': (12.997,-1.565,29.901)
C6: (12.128,-7.745,31.644)
C5: (11.701,-6.458,32.020)
C4: (12.418,-5.389,31.523)
P: (7.114,-2.546,32.898)
C4': (10.540,-1.181,31.567)
C2': (12.009,-2.509,30.255)
C2: (13.806,-6.712,30.440)
N1: (13.211,-7.839,30.840)
N3: (13.492,-5.446,30.720)
N6: (11.519,-8.868,32.032)
N7: (10.659,-6.016,32.824)
N9: (11.797,-4.262,32.010)
O5': (8.605,-2.308,32.390)
O3': (10.346,-1.087,29.140)
OP2: (6.181,-1.666,32.145)
C3': (10.591,-1.944,30.252)
C1': (12.172,-2.877,31.727)
C5': (9.157,-1.019,32.155)
O4': (11.315,-2.021,32.469)
C8: (10.762,-4.710,32.787)
O2': (12.997,-1.565,29.901)
C6: (12.128,-7.745,31.644)
C5: (11.701,-6.458,32.020)
C4: (12.418,-5.389,31.523)
P: (7.114,-2.546,32.898)
C4': (10.540,-1.181,31.567)
C2': (12.009,-2.509,30.255)
C2: (13.806,-6.712,30.440)
N1: (13.211,-7.839,30.840)
N3: (13.492,-5.446,30.720)
N6: (11.519,-8.868,32.032)
N7: (10.659,-6.016,32.824)
N9: (11.797,-4.262,32.010)
O5': (8.605,-2.308,32.390)
O3': (10.346,-1.087,29.140)
OP1: (18.233,-0.887,28.074)
OP2: (19.763,-1.737,26.181)
C3': (16.831,-5.474,27.709)
C1': (15.983,-5.978,25.568)
C5': (16.400,-2.990,27.461)
O4': (15.712,-4.615,25.861)
C8: (17.951,-5.049,24.222)
O2': (15.168,-7.230,27.448)
C6: (19.134,-7.750,22.317)
C5: (18.547,-6.773,23.130)
C4: (17.453,-7.158,23.887)
P: (18.396,-1.480,26.719)
C4': (15.871,-4.380,27.284)
C2': (16.327,-6.657,26.895)
C2: (17.526,-9.213,23.112)
N1: (18.593,-8.985,22.328)
N3: (16.885,-8.379,23.924)
N6: (20.192,-7.522,21.541)
N7: (18.852,-5.437,23.350)
N9: (17.079,-6.042,24.599)
O5': (17.617,-2.861,26.751)
O3': (16.732,-5.718,29.106)
OP2: (19.763,-1.737,26.181)
C3': (16.831,-5.474,27.709)
C1': (15.983,-5.978,25.568)
C5': (16.400,-2.990,27.461)
O4': (15.712,-4.615,25.861)
C8: (17.951,-5.049,24.222)
O2': (15.168,-7.230,27.448)
C6: (19.134,-7.750,22.317)
C5: (18.547,-6.773,23.130)
C4: (17.453,-7.158,23.887)
P: (18.396,-1.480,26.719)
C4': (15.871,-4.380,27.284)
C2': (16.327,-6.657,26.895)
C2: (17.526,-9.213,23.112)
N1: (18.593,-8.985,22.328)
N3: (16.885,-8.379,23.924)
N6: (20.192,-7.522,21.541)
N7: (18.852,-5.437,23.350)
N9: (17.079,-6.042,24.599)
O5': (17.617,-2.861,26.751)
O3': (16.732,-5.718,29.106)
Image (generated by PyMOL):