Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0179:0224
Extra
PDB:
ATOM 1 O3' G A 178 71.780 105.216 19.520 1.00 55.83 O
ATOM 2 P A A 179 73.145 105.280 18.676 1.00 58.61 P
ATOM 3 OP1 A A 179 73.654 103.883 18.591 1.00 56.98 O
ATOM 4 OP2 A A 179 74.025 106.345 19.229 1.00 58.31 O
ATOM 5 O5' A A 179 72.641 105.757 17.239 1.00 59.96 O
ATOM 6 C5' A A 179 73.098 105.118 16.023 1.00 59.37 C
ATOM 7 C4' A A 179 72.199 103.950 15.676 1.00 58.18 C
ATOM 8 O4' A A 179 70.841 104.259 16.082 1.00 57.02 O
ATOM 9 C3' A A 179 72.137 103.612 14.195 1.00 58.12 C
ATOM 10 O3' A A 179 71.872 102.231 13.989 1.00 59.34 O
ATOM 11 C2' A A 179 70.938 104.428 13.738 1.00 58.00 C
ATOM 12 O2' A A 179 70.313 103.887 12.596 1.00 60.80 O
ATOM 13 C1' A A 179 70.010 104.335 14.949 1.00 55.54 C
ATOM 14 N9 A A 179 69.208 105.546 15.070 1.00 52.72 N
ATOM 15 C8 A A 179 69.580 106.747 15.623 1.00 52.67 C
ATOM 16 N7 A A 179 68.669 107.683 15.520 1.00 51.35 N
ATOM 17 C5 A A 179 67.618 107.051 14.870 1.00 51.82 C
ATOM 18 C6 A A 179 66.358 107.508 14.445 1.00 50.91 C
ATOM 19 N6 A A 179 65.929 108.757 14.617 1.00 49.58 N
ATOM 20 N1 A A 179 65.548 106.625 13.823 1.00 51.25 N
ATOM 21 C2 A A 179 65.987 105.369 13.643 1.00 52.32 C
ATOM 22 N3 A A 179 67.152 104.821 13.993 1.00 51.63 N
ATOM 23 C4 A A 179 67.931 105.727 14.606 1.00 52.11 C
ATOM 24 P A A 180 73.091 101.201 13.807 1.00 62.05 P
ATOM 25 OP1 A A 180 74.251 101.943 13.239 1.00 61.61 O
ATOM 26 OP2 A A 180 72.585 99.983 13.106 1.00 59.21 O
ATOM 27 O5' A A 180 73.438 100.831 15.318 1.00 60.71 O
TER
ATOM 1 O3' C B 223 58.834 108.550 12.507 1.00 61.60 O
ATOM 2 P A B 224 58.640 108.303 10.928 1.00 61.83 P
ATOM 3 OP1 A B 224 58.093 109.573 10.374 1.00 62.02 O
ATOM 4 OP2 A B 224 57.895 107.027 10.708 1.00 60.61 O
ATOM 5 O5' A B 224 60.133 108.121 10.404 1.00 58.24 O
ATOM 6 C5' A B 224 60.536 106.952 9.676 1.00 57.11 C
ATOM 7 C4' A B 224 61.923 106.557 10.099 1.00 57.19 C
ATOM 8 O4' A B 224 62.741 107.753 10.099 1.00 56.98 O
ATOM 9 C3' A B 224 62.020 105.994 11.510 1.00 57.59 C
ATOM 10 O3' A B 224 63.197 105.196 11.653 1.00 60.64 O
ATOM 11 C2' A B 224 62.199 107.263 12.338 1.00 58.06 C
ATOM 12 O2' A B 224 62.827 107.038 13.588 1.00 58.67 O
ATOM 13 C1' A B 224 63.097 108.088 11.420 1.00 55.88 C
ATOM 14 N9 A B 224 62.972 109.537 11.559 1.00 53.79 N
ATOM 15 C8 A B 224 61.868 110.336 11.379 1.00 52.28 C
ATOM 16 N7 A B 224 62.104 111.614 11.562 1.00 50.47 N
ATOM 17 C5 A B 224 63.451 111.656 11.891 1.00 51.69 C
ATOM 18 C6 A B 224 64.311 112.715 12.208 1.00 52.45 C
ATOM 19 N6 A B 224 63.924 113.993 12.263 1.00 54.17 N
ATOM 20 N1 A B 224 65.603 112.416 12.478 1.00 52.77 N
ATOM 21 C2 A B 224 65.988 111.135 12.439 1.00 52.75 C
ATOM 22 N3 A B 224 65.272 110.052 12.163 1.00 52.77 N
ATOM 23 C4 A B 224 63.997 110.385 11.894 1.00 52.85 C
ATOM 24 P G B 225 63.486 103.956 10.662 1.00 62.86 P
ATOM 25 OP1 G B 225 62.571 104.038 9.498 1.00 62.82 O
ATOM 26 OP2 G B 225 63.538 102.698 11.463 1.00 64.39 O
ATOM 27 O5' G B 225 64.983 104.249 10.192 1.00 64.07 O
TER
ATOM 2 P A A 179 73.145 105.280 18.676 1.00 58.61 P
ATOM 3 OP1 A A 179 73.654 103.883 18.591 1.00 56.98 O
ATOM 4 OP2 A A 179 74.025 106.345 19.229 1.00 58.31 O
ATOM 5 O5' A A 179 72.641 105.757 17.239 1.00 59.96 O
ATOM 6 C5' A A 179 73.098 105.118 16.023 1.00 59.37 C
ATOM 7 C4' A A 179 72.199 103.950 15.676 1.00 58.18 C
ATOM 8 O4' A A 179 70.841 104.259 16.082 1.00 57.02 O
ATOM 9 C3' A A 179 72.137 103.612 14.195 1.00 58.12 C
ATOM 10 O3' A A 179 71.872 102.231 13.989 1.00 59.34 O
ATOM 11 C2' A A 179 70.938 104.428 13.738 1.00 58.00 C
ATOM 12 O2' A A 179 70.313 103.887 12.596 1.00 60.80 O
ATOM 13 C1' A A 179 70.010 104.335 14.949 1.00 55.54 C
ATOM 14 N9 A A 179 69.208 105.546 15.070 1.00 52.72 N
ATOM 15 C8 A A 179 69.580 106.747 15.623 1.00 52.67 C
ATOM 16 N7 A A 179 68.669 107.683 15.520 1.00 51.35 N
ATOM 17 C5 A A 179 67.618 107.051 14.870 1.00 51.82 C
ATOM 18 C6 A A 179 66.358 107.508 14.445 1.00 50.91 C
ATOM 19 N6 A A 179 65.929 108.757 14.617 1.00 49.58 N
ATOM 20 N1 A A 179 65.548 106.625 13.823 1.00 51.25 N
ATOM 21 C2 A A 179 65.987 105.369 13.643 1.00 52.32 C
ATOM 22 N3 A A 179 67.152 104.821 13.993 1.00 51.63 N
ATOM 23 C4 A A 179 67.931 105.727 14.606 1.00 52.11 C
ATOM 24 P A A 180 73.091 101.201 13.807 1.00 62.05 P
ATOM 25 OP1 A A 180 74.251 101.943 13.239 1.00 61.61 O
ATOM 26 OP2 A A 180 72.585 99.983 13.106 1.00 59.21 O
ATOM 27 O5' A A 180 73.438 100.831 15.318 1.00 60.71 O
TER
ATOM 1 O3' C B 223 58.834 108.550 12.507 1.00 61.60 O
ATOM 2 P A B 224 58.640 108.303 10.928 1.00 61.83 P
ATOM 3 OP1 A B 224 58.093 109.573 10.374 1.00 62.02 O
ATOM 4 OP2 A B 224 57.895 107.027 10.708 1.00 60.61 O
ATOM 5 O5' A B 224 60.133 108.121 10.404 1.00 58.24 O
ATOM 6 C5' A B 224 60.536 106.952 9.676 1.00 57.11 C
ATOM 7 C4' A B 224 61.923 106.557 10.099 1.00 57.19 C
ATOM 8 O4' A B 224 62.741 107.753 10.099 1.00 56.98 O
ATOM 9 C3' A B 224 62.020 105.994 11.510 1.00 57.59 C
ATOM 10 O3' A B 224 63.197 105.196 11.653 1.00 60.64 O
ATOM 11 C2' A B 224 62.199 107.263 12.338 1.00 58.06 C
ATOM 12 O2' A B 224 62.827 107.038 13.588 1.00 58.67 O
ATOM 13 C1' A B 224 63.097 108.088 11.420 1.00 55.88 C
ATOM 14 N9 A B 224 62.972 109.537 11.559 1.00 53.79 N
ATOM 15 C8 A B 224 61.868 110.336 11.379 1.00 52.28 C
ATOM 16 N7 A B 224 62.104 111.614 11.562 1.00 50.47 N
ATOM 17 C5 A B 224 63.451 111.656 11.891 1.00 51.69 C
ATOM 18 C6 A B 224 64.311 112.715 12.208 1.00 52.45 C
ATOM 19 N6 A B 224 63.924 113.993 12.263 1.00 54.17 N
ATOM 20 N1 A B 224 65.603 112.416 12.478 1.00 52.77 N
ATOM 21 C2 A B 224 65.988 111.135 12.439 1.00 52.75 C
ATOM 22 N3 A B 224 65.272 110.052 12.163 1.00 52.77 N
ATOM 23 C4 A B 224 63.997 110.385 11.894 1.00 52.85 C
ATOM 24 P G B 225 63.486 103.956 10.662 1.00 62.86 P
ATOM 25 OP1 G B 225 62.571 104.038 9.498 1.00 62.82 O
ATOM 26 OP2 G B 225 63.538 102.698 11.463 1.00 64.39 O
ATOM 27 O5' G B 225 64.983 104.249 10.192 1.00 64.07 O
TER
Atoms:
OP1: (73.654,103.883,18.591)
OP2: (74.025,106.345,19.229)
C3': (72.137,103.612,14.195)
C1': (70.010,104.335,14.949)
C5': (73.098,105.118,16.023)
O4': (70.841,104.259,16.082)
C8: (69.580,106.747,15.623)
O2': (70.313,103.887,12.596)
C6: (66.358,107.508,14.445)
C5: (67.618,107.051,14.870)
C4: (67.931,105.727,14.606)
P: (73.145,105.280,18.676)
C4': (72.199,103.950,15.676)
C2': (70.938,104.428,13.738)
C2: (65.987,105.369,13.643)
N1: (65.548,106.625,13.823)
N3: (67.152,104.821,13.993)
N6: (65.929,108.757,14.617)
N7: (68.669,107.683,15.520)
N9: (69.208,105.546,15.070)
O5': (72.641,105.757,17.239)
O3': (71.872,102.231,13.989)
OP2: (74.025,106.345,19.229)
C3': (72.137,103.612,14.195)
C1': (70.010,104.335,14.949)
C5': (73.098,105.118,16.023)
O4': (70.841,104.259,16.082)
C8: (69.580,106.747,15.623)
O2': (70.313,103.887,12.596)
C6: (66.358,107.508,14.445)
C5: (67.618,107.051,14.870)
C4: (67.931,105.727,14.606)
P: (73.145,105.280,18.676)
C4': (72.199,103.950,15.676)
C2': (70.938,104.428,13.738)
C2: (65.987,105.369,13.643)
N1: (65.548,106.625,13.823)
N3: (67.152,104.821,13.993)
N6: (65.929,108.757,14.617)
N7: (68.669,107.683,15.520)
N9: (69.208,105.546,15.070)
O5': (72.641,105.757,17.239)
O3': (71.872,102.231,13.989)
OP1: (58.093,109.573,10.374)
OP2: (57.895,107.027,10.708)
C3': (62.020,105.994,11.510)
C1': (63.097,108.088,11.420)
C5': (60.536,106.952,9.676)
O4': (62.741,107.753,10.099)
C8: (61.868,110.336,11.379)
O2': (62.827,107.038,13.588)
C6: (64.311,112.715,12.208)
C5: (63.451,111.656,11.891)
C4: (63.997,110.385,11.894)
P: (58.640,108.303,10.928)
C4': (61.923,106.557,10.099)
C2': (62.199,107.263,12.338)
C2: (65.988,111.135,12.439)
N1: (65.603,112.416,12.478)
N3: (65.272,110.052,12.163)
N6: (63.924,113.993,12.263)
N7: (62.104,111.614,11.562)
N9: (62.972,109.537,11.559)
O5': (60.133,108.121,10.404)
O3': (63.197,105.196,11.653)
OP2: (57.895,107.027,10.708)
C3': (62.020,105.994,11.510)
C1': (63.097,108.088,11.420)
C5': (60.536,106.952,9.676)
O4': (62.741,107.753,10.099)
C8: (61.868,110.336,11.379)
O2': (62.827,107.038,13.588)
C6: (64.311,112.715,12.208)
C5: (63.451,111.656,11.891)
C4: (63.997,110.385,11.894)
P: (58.640,108.303,10.928)
C4': (61.923,106.557,10.099)
C2': (62.199,107.263,12.338)
C2: (65.988,111.135,12.439)
N1: (65.603,112.416,12.478)
N3: (65.272,110.052,12.163)
N6: (63.924,113.993,12.263)
N7: (62.104,111.614,11.562)
N9: (62.972,109.537,11.559)
O5': (60.133,108.121,10.404)
O3': (63.197,105.196,11.653)
Image (generated by PyMOL):