Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0507:0627
Extra
PDB:
ATOM 1 O3' G A 506 24.586 139.601 70.039 1.00 40.73 O
ATOM 2 P A A 507 24.434 139.645 71.646 1.00 40.49 P
ATOM 3 OP1 A A 507 23.036 139.988 71.988 1.00 39.03 O
ATOM 4 OP2 A A 507 25.541 140.478 72.189 1.00 40.29 O
ATOM 5 O5' A A 507 24.735 138.132 72.059 1.00 38.83 O
ATOM 6 C5' A A 507 23.827 137.063 71.713 1.00 38.30 C
ATOM 7 C4' A A 507 24.388 135.725 72.162 1.00 38.95 C
ATOM 8 O4' A A 507 25.250 135.119 71.162 1.00 39.58 O
ATOM 9 C3' A A 507 25.185 135.750 73.455 1.00 39.25 C
ATOM 10 O3' A A 507 24.327 135.544 74.567 1.00 38.74 O
ATOM 11 C2' A A 507 26.194 134.625 73.263 1.00 40.32 C
ATOM 12 O2' A A 507 25.636 133.358 73.556 1.00 41.55 O
ATOM 13 C1' A A 507 26.475 134.730 71.762 1.00 39.83 C
ATOM 14 N9 A A 507 27.482 135.737 71.402 1.00 42.44 N
ATOM 15 C8 A A 507 27.248 136.947 70.790 1.00 41.01 C
ATOM 16 N7 A A 507 28.330 137.637 70.550 1.00 40.83 N
ATOM 17 C5 A A 507 29.351 136.839 71.041 1.00 40.45 C
ATOM 18 C6 A A 507 30.743 137.009 71.073 1.00 39.70 C
ATOM 19 N6 A A 507 31.366 138.082 70.579 1.00 32.43 N
ATOM 20 N1 A A 507 31.483 136.024 71.633 1.00 42.19 N
ATOM 21 C2 A A 507 30.852 134.949 72.123 1.00 41.64 C
ATOM 22 N3 A A 507 29.547 134.674 72.147 1.00 42.39 N
ATOM 23 C4 A A 507 28.844 135.669 71.580 1.00 41.25 C
ATOM 24 P A A 508 24.663 136.237 75.970 1.00 40.30 P
ATOM 25 OP1 A A 508 23.544 135.885 76.861 1.00 42.49 O
ATOM 26 OP2 A A 508 24.987 137.665 75.744 1.00 39.58 O
ATOM 27 O5' A A 508 25.992 135.495 76.459 1.00 40.23 O
TER
ATOM 1 O3' C B 626 32.073 130.264 77.534 1.00 35.07 O
ATOM 2 P A B 627 32.134 129.082 76.449 1.00 36.51 P
ATOM 3 OP1 A B 627 30.753 128.553 76.388 1.00 38.16 O
ATOM 4 OP2 A B 627 33.254 128.161 76.729 1.00 33.70 O
ATOM 5 O5' A B 627 32.431 129.829 75.071 1.00 37.16 O
ATOM 6 C5' A B 627 31.424 130.650 74.450 1.00 35.80 C
ATOM 7 C4' A B 627 32.004 131.414 73.282 1.00 36.13 C
ATOM 8 O4' A B 627 33.084 132.282 73.751 1.00 36.84 O
ATOM 9 C3' A B 627 32.662 130.587 72.191 1.00 34.48 C
ATOM 10 O3' A B 627 31.726 129.973 71.309 1.00 35.92 O
ATOM 11 C2' A B 627 33.545 131.633 71.531 1.00 36.14 C
ATOM 12 O2' A B 627 32.793 132.591 70.802 1.00 33.72 O
ATOM 13 C1' A B 627 34.106 132.339 72.766 1.00 36.90 C
ATOM 14 N9 A B 627 35.303 131.680 73.302 1.00 38.11 N
ATOM 15 C8 A B 627 35.379 130.750 74.319 1.00 36.64 C
ATOM 16 N7 A B 627 36.600 130.385 74.612 1.00 35.16 N
ATOM 17 C5 A B 627 37.388 131.115 73.728 1.00 37.28 C
ATOM 18 C6 A B 627 38.786 131.207 73.550 1.00 37.73 C
ATOM 19 N6 A B 627 39.679 130.570 74.315 1.00 38.00 N
ATOM 20 N1 A B 627 39.241 132.001 72.556 1.00 37.71 N
ATOM 21 C2 A B 627 38.353 132.680 71.820 1.00 36.90 C
ATOM 22 N3 A B 627 37.026 132.710 71.914 1.00 37.32 N
ATOM 23 C4 A B 627 36.600 131.894 72.897 1.00 37.36 C
ATOM 24 P G B 628 31.963 128.448 70.824 1.00 35.58 P
ATOM 25 OP1 G B 628 30.701 127.981 70.231 1.00 38.26 O
ATOM 26 OP2 G B 628 32.593 127.667 71.905 1.00 38.22 O
ATOM 27 O5' G B 628 33.076 128.544 69.687 1.00 38.12 O
TER
ATOM 2 P A A 507 24.434 139.645 71.646 1.00 40.49 P
ATOM 3 OP1 A A 507 23.036 139.988 71.988 1.00 39.03 O
ATOM 4 OP2 A A 507 25.541 140.478 72.189 1.00 40.29 O
ATOM 5 O5' A A 507 24.735 138.132 72.059 1.00 38.83 O
ATOM 6 C5' A A 507 23.827 137.063 71.713 1.00 38.30 C
ATOM 7 C4' A A 507 24.388 135.725 72.162 1.00 38.95 C
ATOM 8 O4' A A 507 25.250 135.119 71.162 1.00 39.58 O
ATOM 9 C3' A A 507 25.185 135.750 73.455 1.00 39.25 C
ATOM 10 O3' A A 507 24.327 135.544 74.567 1.00 38.74 O
ATOM 11 C2' A A 507 26.194 134.625 73.263 1.00 40.32 C
ATOM 12 O2' A A 507 25.636 133.358 73.556 1.00 41.55 O
ATOM 13 C1' A A 507 26.475 134.730 71.762 1.00 39.83 C
ATOM 14 N9 A A 507 27.482 135.737 71.402 1.00 42.44 N
ATOM 15 C8 A A 507 27.248 136.947 70.790 1.00 41.01 C
ATOM 16 N7 A A 507 28.330 137.637 70.550 1.00 40.83 N
ATOM 17 C5 A A 507 29.351 136.839 71.041 1.00 40.45 C
ATOM 18 C6 A A 507 30.743 137.009 71.073 1.00 39.70 C
ATOM 19 N6 A A 507 31.366 138.082 70.579 1.00 32.43 N
ATOM 20 N1 A A 507 31.483 136.024 71.633 1.00 42.19 N
ATOM 21 C2 A A 507 30.852 134.949 72.123 1.00 41.64 C
ATOM 22 N3 A A 507 29.547 134.674 72.147 1.00 42.39 N
ATOM 23 C4 A A 507 28.844 135.669 71.580 1.00 41.25 C
ATOM 24 P A A 508 24.663 136.237 75.970 1.00 40.30 P
ATOM 25 OP1 A A 508 23.544 135.885 76.861 1.00 42.49 O
ATOM 26 OP2 A A 508 24.987 137.665 75.744 1.00 39.58 O
ATOM 27 O5' A A 508 25.992 135.495 76.459 1.00 40.23 O
TER
ATOM 1 O3' C B 626 32.073 130.264 77.534 1.00 35.07 O
ATOM 2 P A B 627 32.134 129.082 76.449 1.00 36.51 P
ATOM 3 OP1 A B 627 30.753 128.553 76.388 1.00 38.16 O
ATOM 4 OP2 A B 627 33.254 128.161 76.729 1.00 33.70 O
ATOM 5 O5' A B 627 32.431 129.829 75.071 1.00 37.16 O
ATOM 6 C5' A B 627 31.424 130.650 74.450 1.00 35.80 C
ATOM 7 C4' A B 627 32.004 131.414 73.282 1.00 36.13 C
ATOM 8 O4' A B 627 33.084 132.282 73.751 1.00 36.84 O
ATOM 9 C3' A B 627 32.662 130.587 72.191 1.00 34.48 C
ATOM 10 O3' A B 627 31.726 129.973 71.309 1.00 35.92 O
ATOM 11 C2' A B 627 33.545 131.633 71.531 1.00 36.14 C
ATOM 12 O2' A B 627 32.793 132.591 70.802 1.00 33.72 O
ATOM 13 C1' A B 627 34.106 132.339 72.766 1.00 36.90 C
ATOM 14 N9 A B 627 35.303 131.680 73.302 1.00 38.11 N
ATOM 15 C8 A B 627 35.379 130.750 74.319 1.00 36.64 C
ATOM 16 N7 A B 627 36.600 130.385 74.612 1.00 35.16 N
ATOM 17 C5 A B 627 37.388 131.115 73.728 1.00 37.28 C
ATOM 18 C6 A B 627 38.786 131.207 73.550 1.00 37.73 C
ATOM 19 N6 A B 627 39.679 130.570 74.315 1.00 38.00 N
ATOM 20 N1 A B 627 39.241 132.001 72.556 1.00 37.71 N
ATOM 21 C2 A B 627 38.353 132.680 71.820 1.00 36.90 C
ATOM 22 N3 A B 627 37.026 132.710 71.914 1.00 37.32 N
ATOM 23 C4 A B 627 36.600 131.894 72.897 1.00 37.36 C
ATOM 24 P G B 628 31.963 128.448 70.824 1.00 35.58 P
ATOM 25 OP1 G B 628 30.701 127.981 70.231 1.00 38.26 O
ATOM 26 OP2 G B 628 32.593 127.667 71.905 1.00 38.22 O
ATOM 27 O5' G B 628 33.076 128.544 69.687 1.00 38.12 O
TER
Atoms:
OP1: (23.036,139.988,71.988)
OP2: (25.541,140.478,72.189)
C3': (25.185,135.750,73.455)
C1': (26.475,134.730,71.762)
C5': (23.827,137.063,71.713)
O4': (25.250,135.119,71.162)
C8: (27.248,136.947,70.790)
O2': (25.636,133.358,73.556)
C6: (30.743,137.009,71.073)
C5: (29.351,136.839,71.041)
C4: (28.844,135.669,71.580)
P: (24.434,139.645,71.646)
C4': (24.388,135.725,72.162)
C2': (26.194,134.625,73.263)
C2: (30.852,134.949,72.123)
N1: (31.483,136.024,71.633)
N3: (29.547,134.674,72.147)
N6: (31.366,138.082,70.579)
N7: (28.330,137.637,70.550)
N9: (27.482,135.737,71.402)
O5': (24.735,138.132,72.059)
O3': (24.327,135.544,74.567)
OP2: (25.541,140.478,72.189)
C3': (25.185,135.750,73.455)
C1': (26.475,134.730,71.762)
C5': (23.827,137.063,71.713)
O4': (25.250,135.119,71.162)
C8: (27.248,136.947,70.790)
O2': (25.636,133.358,73.556)
C6: (30.743,137.009,71.073)
C5: (29.351,136.839,71.041)
C4: (28.844,135.669,71.580)
P: (24.434,139.645,71.646)
C4': (24.388,135.725,72.162)
C2': (26.194,134.625,73.263)
C2: (30.852,134.949,72.123)
N1: (31.483,136.024,71.633)
N3: (29.547,134.674,72.147)
N6: (31.366,138.082,70.579)
N7: (28.330,137.637,70.550)
N9: (27.482,135.737,71.402)
O5': (24.735,138.132,72.059)
O3': (24.327,135.544,74.567)
OP1: (30.753,128.553,76.388)
OP2: (33.254,128.161,76.729)
C3': (32.662,130.587,72.191)
C1': (34.106,132.339,72.766)
C5': (31.424,130.650,74.450)
O4': (33.084,132.282,73.751)
C8: (35.379,130.750,74.319)
O2': (32.793,132.591,70.802)
C6: (38.786,131.207,73.550)
C5: (37.388,131.115,73.728)
C4: (36.600,131.894,72.897)
P: (32.134,129.082,76.449)
C4': (32.004,131.414,73.282)
C2': (33.545,131.633,71.531)
C2: (38.353,132.680,71.820)
N1: (39.241,132.001,72.556)
N3: (37.026,132.710,71.914)
N6: (39.679,130.570,74.315)
N7: (36.600,130.385,74.612)
N9: (35.303,131.680,73.302)
O5': (32.431,129.829,75.071)
O3': (31.726,129.973,71.309)
OP2: (33.254,128.161,76.729)
C3': (32.662,130.587,72.191)
C1': (34.106,132.339,72.766)
C5': (31.424,130.650,74.450)
O4': (33.084,132.282,73.751)
C8: (35.379,130.750,74.319)
O2': (32.793,132.591,70.802)
C6: (38.786,131.207,73.550)
C5: (37.388,131.115,73.728)
C4: (36.600,131.894,72.897)
P: (32.134,129.082,76.449)
C4': (32.004,131.414,73.282)
C2': (33.545,131.633,71.531)
C2: (38.353,132.680,71.820)
N1: (39.241,132.001,72.556)
N3: (37.026,132.710,71.914)
N6: (39.679,130.570,74.315)
N7: (36.600,130.385,74.612)
N9: (35.303,131.680,73.302)
O5': (32.431,129.829,75.071)
O3': (31.726,129.973,71.309)
Image (generated by PyMOL):