Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02638:02417
Extra
PDB:
ATOM 1 O3' G A2637 52.588 125.457 154.586 1.00 50.44 O
ATOM 2 P A A2638 52.474 126.690 153.568 1.00 51.46 P
ATOM 3 OP1 A A2638 53.518 127.682 153.923 1.00 51.57 O
ATOM 4 OP2 A A2638 51.056 127.125 153.486 1.00 50.48 O
ATOM 5 O5' A A2638 52.904 126.041 152.182 1.00 53.21 O
ATOM 6 C5' A A2638 52.952 126.837 150.996 1.00 52.92 C
ATOM 7 C4' A A2638 54.096 126.405 150.119 1.00 52.39 C
ATOM 8 O4' A A2638 53.972 124.996 149.801 1.00 52.77 O
ATOM 9 C3' A A2638 54.088 127.112 148.781 1.00 51.90 C
ATOM 10 O3' A A2638 54.795 128.333 148.882 1.00 51.54 O
ATOM 11 C2' A A2638 54.782 126.117 147.870 1.00 51.28 C
ATOM 12 O2' A A2638 56.182 126.179 148.029 1.00 52.07 O
ATOM 13 C1' A A2638 54.255 124.792 148.427 1.00 50.86 C
ATOM 14 N9 A A2638 53.032 124.298 147.790 1.00 49.72 N
ATOM 15 C8 A A2638 51.777 124.227 148.347 1.00 48.14 C
ATOM 16 N7 A A2638 50.883 123.676 147.566 1.00 48.81 N
ATOM 17 C5 A A2638 51.589 123.380 146.408 1.00 48.63 C
ATOM 18 C6 A A2638 51.207 122.777 145.195 1.00 48.70 C
ATOM 19 N6 A A2638 49.977 122.321 144.947 1.00 45.91 N
ATOM 20 N1 A A2638 52.149 122.648 144.236 1.00 50.21 N
ATOM 21 C2 A A2638 53.388 123.085 144.493 1.00 49.27 C
ATOM 22 N3 A A2638 53.870 123.654 145.594 1.00 48.35 N
ATOM 23 C4 A A2638 52.909 123.775 146.525 1.00 48.46 C
ATOM 24 P A A2639 54.000 129.690 149.192 1.00 51.56 P
ATOM 25 OP1 A A2639 54.566 130.240 150.452 1.00 50.20 O
ATOM 26 OP2 A A2639 52.532 129.438 149.088 1.00 49.65 O
ATOM 27 O5' A A2639 54.445 130.651 148.006 1.00 50.22 O
TER
ATOM 1 O3' C B2416 53.418 116.859 142.876 1.00 39.79 O
ATOM 2 P A B2417 53.443 117.214 141.308 1.00 41.75 P
ATOM 3 OP1 A B2417 52.034 117.170 140.835 1.00 41.28 O
ATOM 4 OP2 A B2417 54.468 116.374 140.634 1.00 40.19 O
ATOM 5 O5' A B2417 53.959 118.719 141.271 1.00 38.37 O
ATOM 6 C5' A B2417 53.185 119.776 141.849 1.00 37.67 C
ATOM 7 C4' A B2417 54.003 121.038 141.908 1.00 39.41 C
ATOM 8 O4' A B2417 55.174 120.802 142.732 1.00 39.69 O
ATOM 9 C3' A B2417 54.591 121.505 140.587 1.00 40.31 C
ATOM 10 O3' A B2417 53.634 122.227 139.817 1.00 41.43 O
ATOM 11 C2' A B2417 55.750 122.375 141.052 1.00 39.40 C
ATOM 12 O2' A B2417 55.307 123.632 141.523 1.00 38.71 O
ATOM 13 C1' A B2417 56.265 121.566 142.242 1.00 37.85 C
ATOM 14 N9 A B2417 57.365 120.656 141.918 1.00 36.19 N
ATOM 15 C8 A B2417 57.302 119.341 141.522 1.00 35.95 C
ATOM 16 N7 A B2417 58.476 118.797 141.301 1.00 33.13 N
ATOM 17 C5 A B2417 59.372 119.821 141.570 1.00 33.58 C
ATOM 18 C6 A B2417 60.770 119.889 141.514 1.00 33.35 C
ATOM 19 N6 A B2417 61.550 118.863 141.172 1.00 34.02 N
ATOM 20 N1 A B2417 61.353 121.063 141.830 1.00 32.64 N
ATOM 21 C2 A B2417 60.577 122.086 142.192 1.00 33.45 C
ATOM 22 N3 A B2417 59.256 122.146 142.293 1.00 34.46 N
ATOM 23 C4 A B2417 58.703 120.969 141.957 1.00 34.92 C
ATOM 24 P A B2418 53.655 122.122 138.211 1.00 41.14 P
ATOM 25 OP1 A B2418 52.410 122.745 137.686 1.00 42.12 O
ATOM 26 OP2 A B2418 53.985 120.722 137.845 1.00 39.56 O
ATOM 27 O5' A B2418 54.863 123.061 137.785 1.00 39.30 O
TER
ATOM 2 P A A2638 52.474 126.690 153.568 1.00 51.46 P
ATOM 3 OP1 A A2638 53.518 127.682 153.923 1.00 51.57 O
ATOM 4 OP2 A A2638 51.056 127.125 153.486 1.00 50.48 O
ATOM 5 O5' A A2638 52.904 126.041 152.182 1.00 53.21 O
ATOM 6 C5' A A2638 52.952 126.837 150.996 1.00 52.92 C
ATOM 7 C4' A A2638 54.096 126.405 150.119 1.00 52.39 C
ATOM 8 O4' A A2638 53.972 124.996 149.801 1.00 52.77 O
ATOM 9 C3' A A2638 54.088 127.112 148.781 1.00 51.90 C
ATOM 10 O3' A A2638 54.795 128.333 148.882 1.00 51.54 O
ATOM 11 C2' A A2638 54.782 126.117 147.870 1.00 51.28 C
ATOM 12 O2' A A2638 56.182 126.179 148.029 1.00 52.07 O
ATOM 13 C1' A A2638 54.255 124.792 148.427 1.00 50.86 C
ATOM 14 N9 A A2638 53.032 124.298 147.790 1.00 49.72 N
ATOM 15 C8 A A2638 51.777 124.227 148.347 1.00 48.14 C
ATOM 16 N7 A A2638 50.883 123.676 147.566 1.00 48.81 N
ATOM 17 C5 A A2638 51.589 123.380 146.408 1.00 48.63 C
ATOM 18 C6 A A2638 51.207 122.777 145.195 1.00 48.70 C
ATOM 19 N6 A A2638 49.977 122.321 144.947 1.00 45.91 N
ATOM 20 N1 A A2638 52.149 122.648 144.236 1.00 50.21 N
ATOM 21 C2 A A2638 53.388 123.085 144.493 1.00 49.27 C
ATOM 22 N3 A A2638 53.870 123.654 145.594 1.00 48.35 N
ATOM 23 C4 A A2638 52.909 123.775 146.525 1.00 48.46 C
ATOM 24 P A A2639 54.000 129.690 149.192 1.00 51.56 P
ATOM 25 OP1 A A2639 54.566 130.240 150.452 1.00 50.20 O
ATOM 26 OP2 A A2639 52.532 129.438 149.088 1.00 49.65 O
ATOM 27 O5' A A2639 54.445 130.651 148.006 1.00 50.22 O
TER
ATOM 1 O3' C B2416 53.418 116.859 142.876 1.00 39.79 O
ATOM 2 P A B2417 53.443 117.214 141.308 1.00 41.75 P
ATOM 3 OP1 A B2417 52.034 117.170 140.835 1.00 41.28 O
ATOM 4 OP2 A B2417 54.468 116.374 140.634 1.00 40.19 O
ATOM 5 O5' A B2417 53.959 118.719 141.271 1.00 38.37 O
ATOM 6 C5' A B2417 53.185 119.776 141.849 1.00 37.67 C
ATOM 7 C4' A B2417 54.003 121.038 141.908 1.00 39.41 C
ATOM 8 O4' A B2417 55.174 120.802 142.732 1.00 39.69 O
ATOM 9 C3' A B2417 54.591 121.505 140.587 1.00 40.31 C
ATOM 10 O3' A B2417 53.634 122.227 139.817 1.00 41.43 O
ATOM 11 C2' A B2417 55.750 122.375 141.052 1.00 39.40 C
ATOM 12 O2' A B2417 55.307 123.632 141.523 1.00 38.71 O
ATOM 13 C1' A B2417 56.265 121.566 142.242 1.00 37.85 C
ATOM 14 N9 A B2417 57.365 120.656 141.918 1.00 36.19 N
ATOM 15 C8 A B2417 57.302 119.341 141.522 1.00 35.95 C
ATOM 16 N7 A B2417 58.476 118.797 141.301 1.00 33.13 N
ATOM 17 C5 A B2417 59.372 119.821 141.570 1.00 33.58 C
ATOM 18 C6 A B2417 60.770 119.889 141.514 1.00 33.35 C
ATOM 19 N6 A B2417 61.550 118.863 141.172 1.00 34.02 N
ATOM 20 N1 A B2417 61.353 121.063 141.830 1.00 32.64 N
ATOM 21 C2 A B2417 60.577 122.086 142.192 1.00 33.45 C
ATOM 22 N3 A B2417 59.256 122.146 142.293 1.00 34.46 N
ATOM 23 C4 A B2417 58.703 120.969 141.957 1.00 34.92 C
ATOM 24 P A B2418 53.655 122.122 138.211 1.00 41.14 P
ATOM 25 OP1 A B2418 52.410 122.745 137.686 1.00 42.12 O
ATOM 26 OP2 A B2418 53.985 120.722 137.845 1.00 39.56 O
ATOM 27 O5' A B2418 54.863 123.061 137.785 1.00 39.30 O
TER
Atoms:
OP1: (53.518,127.682,153.923)
OP2: (51.056,127.125,153.486)
C3': (54.088,127.112,148.781)
C1': (54.255,124.792,148.427)
C5': (52.952,126.837,150.996)
O4': (53.972,124.996,149.801)
C8: (51.777,124.227,148.347)
O2': (56.182,126.179,148.029)
C6: (51.207,122.777,145.195)
C5: (51.589,123.380,146.408)
C4: (52.909,123.775,146.525)
P: (52.474,126.690,153.568)
C4': (54.096,126.405,150.119)
C2': (54.782,126.117,147.870)
C2: (53.388,123.085,144.493)
N1: (52.149,122.648,144.236)
N3: (53.870,123.654,145.594)
N6: (49.977,122.321,144.947)
N7: (50.883,123.676,147.566)
N9: (53.032,124.298,147.790)
O5': (52.904,126.041,152.182)
O3': (54.795,128.333,148.882)
OP2: (51.056,127.125,153.486)
C3': (54.088,127.112,148.781)
C1': (54.255,124.792,148.427)
C5': (52.952,126.837,150.996)
O4': (53.972,124.996,149.801)
C8: (51.777,124.227,148.347)
O2': (56.182,126.179,148.029)
C6: (51.207,122.777,145.195)
C5: (51.589,123.380,146.408)
C4: (52.909,123.775,146.525)
P: (52.474,126.690,153.568)
C4': (54.096,126.405,150.119)
C2': (54.782,126.117,147.870)
C2: (53.388,123.085,144.493)
N1: (52.149,122.648,144.236)
N3: (53.870,123.654,145.594)
N6: (49.977,122.321,144.947)
N7: (50.883,123.676,147.566)
N9: (53.032,124.298,147.790)
O5': (52.904,126.041,152.182)
O3': (54.795,128.333,148.882)
OP1: (52.034,117.170,140.835)
OP2: (54.468,116.374,140.634)
C3': (54.591,121.505,140.587)
C1': (56.265,121.566,142.242)
C5': (53.185,119.776,141.849)
O4': (55.174,120.802,142.732)
C8: (57.302,119.341,141.522)
O2': (55.307,123.632,141.523)
C6: (60.770,119.889,141.514)
C5: (59.372,119.821,141.570)
C4: (58.703,120.969,141.957)
P: (53.443,117.214,141.308)
C4': (54.003,121.038,141.908)
C2': (55.750,122.375,141.052)
C2: (60.577,122.086,142.192)
N1: (61.353,121.063,141.830)
N3: (59.256,122.146,142.293)
N6: (61.550,118.863,141.172)
N7: (58.476,118.797,141.301)
N9: (57.365,120.656,141.918)
O5': (53.959,118.719,141.271)
O3': (53.634,122.227,139.817)
OP2: (54.468,116.374,140.634)
C3': (54.591,121.505,140.587)
C1': (56.265,121.566,142.242)
C5': (53.185,119.776,141.849)
O4': (55.174,120.802,142.732)
C8: (57.302,119.341,141.522)
O2': (55.307,123.632,141.523)
C6: (60.770,119.889,141.514)
C5: (59.372,119.821,141.570)
C4: (58.703,120.969,141.957)
P: (53.443,117.214,141.308)
C4': (54.003,121.038,141.908)
C2': (55.750,122.375,141.052)
C2: (60.577,122.086,142.192)
N1: (61.353,121.063,141.830)
N3: (59.256,122.146,142.293)
N6: (61.550,118.863,141.172)
N7: (58.476,118.797,141.301)
N9: (57.365,120.656,141.918)
O5': (53.959,118.719,141.271)
O3': (53.634,122.227,139.817)
Image (generated by PyMOL):