Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:R57:R41
Extra
PDB:
ATOM 1 O3' G A 56 -6.904 -13.447 73.132 1.00 58.73 O
ATOM 2 P A A 57 -6.436 -11.938 72.854 1.00 58.75 P
ATOM 3 OP1 A A 57 -6.337 -11.270 74.172 1.00 58.85 O
ATOM 4 OP2 A A 57 -7.312 -11.360 71.808 1.00 58.58 O
ATOM 5 O5' A A 57 -4.972 -12.103 72.222 1.00 58.15 O
ATOM 6 C5' A A 57 -3.833 -12.397 73.038 1.00 57.34 C
ATOM 7 C4' A A 57 -2.566 -12.454 72.201 1.00 56.59 C
ATOM 8 O4' A A 57 -2.672 -13.521 71.218 1.00 55.86 O
ATOM 9 C3' A A 57 -2.289 -11.208 71.371 1.00 56.49 C
ATOM 10 O3' A A 57 -1.651 -10.184 72.138 1.00 57.63 O
ATOM 11 C2' A A 57 -1.403 -11.777 70.265 1.00 55.69 C
ATOM 12 O2' A A 57 -0.058 -11.974 70.662 1.00 55.48 O
ATOM 13 C1' A A 57 -2.096 -13.111 69.988 1.00 54.79 C
ATOM 14 N9 A A 57 -3.123 -13.014 68.943 1.00 53.00 N
ATOM 15 C8 A A 57 -4.461 -12.776 69.108 1.00 52.41 C
ATOM 16 N7 A A 57 -5.143 -12.736 67.988 1.00 51.79 N
ATOM 17 C5 A A 57 -4.190 -12.956 67.014 1.00 51.46 C
ATOM 18 C6 A A 57 -4.268 -13.033 65.607 1.00 51.20 C
ATOM 19 N6 A A 57 -5.408 -12.886 64.928 1.00 51.15 N
ATOM 20 N1 A A 57 -3.127 -13.269 64.920 1.00 51.37 N
ATOM 21 C2 A A 57 -1.980 -13.421 65.600 1.00 51.20 C
ATOM 22 N3 A A 57 -1.787 -13.366 66.920 1.00 51.52 N
ATOM 23 C4 A A 57 -2.938 -13.130 67.580 1.00 51.98 C
ATOM 24 P U A 58 -2.223 -8.682 72.126 1.00 58.03 P
ATOM 25 OP1 U A 58 -2.909 -8.461 73.418 1.00 58.33 O
ATOM 26 OP2 U A 58 -2.943 -8.443 70.853 1.00 57.70 O
ATOM 27 O5' U A 58 -0.897 -7.793 72.114 1.00 58.30 O
TER
ATOM 1 O3' U B 40 -5.040 -10.703 59.553 1.00 72.19 O
ATOM 2 P A B 41 -4.587 -12.128 60.123 1.00 71.29 P
ATOM 3 OP1 A B 41 -4.709 -13.116 59.027 1.00 71.27 O
ATOM 4 OP2 A B 41 -5.295 -12.354 61.402 1.00 71.40 O
ATOM 5 O5' A B 41 -3.029 -11.915 60.422 1.00 69.38 O
ATOM 6 C5' A B 41 -2.290 -10.948 59.686 1.00 66.32 C
ATOM 7 C4' A B 41 -0.944 -10.686 60.339 1.00 64.00 C
ATOM 8 O4' A B 41 -1.133 -9.855 61.513 1.00 62.83 O
ATOM 9 C3' A B 41 -0.215 -11.931 60.826 1.00 62.78 C
ATOM 10 O3' A B 41 1.191 -11.737 60.740 1.00 61.77 O
ATOM 11 C2' A B 41 -0.677 -12.035 62.275 1.00 62.29 C
ATOM 12 O2' A B 41 0.256 -12.717 63.091 1.00 62.48 O
ATOM 13 C1' A B 41 -0.751 -10.566 62.675 1.00 61.87 C
ATOM 14 N9 A B 41 -1.730 -10.296 63.724 1.00 60.83 N
ATOM 15 C8 A B 41 -3.076 -10.118 63.568 1.00 60.64 C
ATOM 16 N7 A B 41 -3.713 -9.889 64.692 1.00 60.31 N
ATOM 17 C5 A B 41 -2.715 -9.919 65.652 1.00 59.94 C
ATOM 18 C6 A B 41 -2.738 -9.747 67.050 1.00 59.73 C
ATOM 19 N6 A B 41 -3.854 -9.500 67.744 1.00 59.37 N
ATOM 20 N1 A B 41 -1.564 -9.839 67.710 1.00 59.63 N
ATOM 21 C2 A B 41 -0.450 -10.086 67.012 1.00 59.58 C
ATOM 22 N3 A B 41 -0.304 -10.266 65.700 1.00 59.83 N
ATOM 23 C4 A B 41 -1.486 -10.169 65.072 1.00 60.17 C
ATOM 24 P U B 42 2.021 -12.422 59.556 1.00 61.11 P
ATOM 25 OP1 U B 42 1.574 -11.816 58.280 1.00 61.13 O
ATOM 26 OP2 U B 42 1.939 -13.888 59.737 1.00 60.68 O
ATOM 27 O5' U B 42 3.522 -11.945 59.850 1.00 60.16 O
TER
ATOM 2 P A A 57 -6.436 -11.938 72.854 1.00 58.75 P
ATOM 3 OP1 A A 57 -6.337 -11.270 74.172 1.00 58.85 O
ATOM 4 OP2 A A 57 -7.312 -11.360 71.808 1.00 58.58 O
ATOM 5 O5' A A 57 -4.972 -12.103 72.222 1.00 58.15 O
ATOM 6 C5' A A 57 -3.833 -12.397 73.038 1.00 57.34 C
ATOM 7 C4' A A 57 -2.566 -12.454 72.201 1.00 56.59 C
ATOM 8 O4' A A 57 -2.672 -13.521 71.218 1.00 55.86 O
ATOM 9 C3' A A 57 -2.289 -11.208 71.371 1.00 56.49 C
ATOM 10 O3' A A 57 -1.651 -10.184 72.138 1.00 57.63 O
ATOM 11 C2' A A 57 -1.403 -11.777 70.265 1.00 55.69 C
ATOM 12 O2' A A 57 -0.058 -11.974 70.662 1.00 55.48 O
ATOM 13 C1' A A 57 -2.096 -13.111 69.988 1.00 54.79 C
ATOM 14 N9 A A 57 -3.123 -13.014 68.943 1.00 53.00 N
ATOM 15 C8 A A 57 -4.461 -12.776 69.108 1.00 52.41 C
ATOM 16 N7 A A 57 -5.143 -12.736 67.988 1.00 51.79 N
ATOM 17 C5 A A 57 -4.190 -12.956 67.014 1.00 51.46 C
ATOM 18 C6 A A 57 -4.268 -13.033 65.607 1.00 51.20 C
ATOM 19 N6 A A 57 -5.408 -12.886 64.928 1.00 51.15 N
ATOM 20 N1 A A 57 -3.127 -13.269 64.920 1.00 51.37 N
ATOM 21 C2 A A 57 -1.980 -13.421 65.600 1.00 51.20 C
ATOM 22 N3 A A 57 -1.787 -13.366 66.920 1.00 51.52 N
ATOM 23 C4 A A 57 -2.938 -13.130 67.580 1.00 51.98 C
ATOM 24 P U A 58 -2.223 -8.682 72.126 1.00 58.03 P
ATOM 25 OP1 U A 58 -2.909 -8.461 73.418 1.00 58.33 O
ATOM 26 OP2 U A 58 -2.943 -8.443 70.853 1.00 57.70 O
ATOM 27 O5' U A 58 -0.897 -7.793 72.114 1.00 58.30 O
TER
ATOM 1 O3' U B 40 -5.040 -10.703 59.553 1.00 72.19 O
ATOM 2 P A B 41 -4.587 -12.128 60.123 1.00 71.29 P
ATOM 3 OP1 A B 41 -4.709 -13.116 59.027 1.00 71.27 O
ATOM 4 OP2 A B 41 -5.295 -12.354 61.402 1.00 71.40 O
ATOM 5 O5' A B 41 -3.029 -11.915 60.422 1.00 69.38 O
ATOM 6 C5' A B 41 -2.290 -10.948 59.686 1.00 66.32 C
ATOM 7 C4' A B 41 -0.944 -10.686 60.339 1.00 64.00 C
ATOM 8 O4' A B 41 -1.133 -9.855 61.513 1.00 62.83 O
ATOM 9 C3' A B 41 -0.215 -11.931 60.826 1.00 62.78 C
ATOM 10 O3' A B 41 1.191 -11.737 60.740 1.00 61.77 O
ATOM 11 C2' A B 41 -0.677 -12.035 62.275 1.00 62.29 C
ATOM 12 O2' A B 41 0.256 -12.717 63.091 1.00 62.48 O
ATOM 13 C1' A B 41 -0.751 -10.566 62.675 1.00 61.87 C
ATOM 14 N9 A B 41 -1.730 -10.296 63.724 1.00 60.83 N
ATOM 15 C8 A B 41 -3.076 -10.118 63.568 1.00 60.64 C
ATOM 16 N7 A B 41 -3.713 -9.889 64.692 1.00 60.31 N
ATOM 17 C5 A B 41 -2.715 -9.919 65.652 1.00 59.94 C
ATOM 18 C6 A B 41 -2.738 -9.747 67.050 1.00 59.73 C
ATOM 19 N6 A B 41 -3.854 -9.500 67.744 1.00 59.37 N
ATOM 20 N1 A B 41 -1.564 -9.839 67.710 1.00 59.63 N
ATOM 21 C2 A B 41 -0.450 -10.086 67.012 1.00 59.58 C
ATOM 22 N3 A B 41 -0.304 -10.266 65.700 1.00 59.83 N
ATOM 23 C4 A B 41 -1.486 -10.169 65.072 1.00 60.17 C
ATOM 24 P U B 42 2.021 -12.422 59.556 1.00 61.11 P
ATOM 25 OP1 U B 42 1.574 -11.816 58.280 1.00 61.13 O
ATOM 26 OP2 U B 42 1.939 -13.888 59.737 1.00 60.68 O
ATOM 27 O5' U B 42 3.522 -11.945 59.850 1.00 60.16 O
TER
Atoms:
OP1: (-6.337,-11.270,74.172)
OP2: (-7.312,-11.360,71.808)
C3': (-2.289,-11.208,71.371)
C1': (-2.096,-13.111,69.988)
C5': (-3.833,-12.397,73.038)
O4': (-2.672,-13.521,71.218)
C8: (-4.461,-12.776,69.108)
O2': (-0.058,-11.974,70.662)
C6: (-4.268,-13.033,65.607)
C5: (-4.190,-12.956,67.014)
C4: (-2.938,-13.130,67.580)
P: (-6.436,-11.938,72.854)
C4': (-2.566,-12.454,72.201)
C2': (-1.403,-11.777,70.265)
C2: (-1.980,-13.421,65.600)
N1: (-3.127,-13.269,64.920)
N3: (-1.787,-13.366,66.920)
N6: (-5.408,-12.886,64.928)
N7: (-5.143,-12.736,67.988)
N9: (-3.123,-13.014,68.943)
O5': (-4.972,-12.103,72.222)
O3': (-1.651,-10.184,72.138)
OP2: (-7.312,-11.360,71.808)
C3': (-2.289,-11.208,71.371)
C1': (-2.096,-13.111,69.988)
C5': (-3.833,-12.397,73.038)
O4': (-2.672,-13.521,71.218)
C8: (-4.461,-12.776,69.108)
O2': (-0.058,-11.974,70.662)
C6: (-4.268,-13.033,65.607)
C5: (-4.190,-12.956,67.014)
C4: (-2.938,-13.130,67.580)
P: (-6.436,-11.938,72.854)
C4': (-2.566,-12.454,72.201)
C2': (-1.403,-11.777,70.265)
C2: (-1.980,-13.421,65.600)
N1: (-3.127,-13.269,64.920)
N3: (-1.787,-13.366,66.920)
N6: (-5.408,-12.886,64.928)
N7: (-5.143,-12.736,67.988)
N9: (-3.123,-13.014,68.943)
O5': (-4.972,-12.103,72.222)
O3': (-1.651,-10.184,72.138)
OP1: (-4.709,-13.116,59.027)
OP2: (-5.295,-12.354,61.402)
C3': (-0.215,-11.931,60.826)
C1': (-0.751,-10.566,62.675)
C5': (-2.290,-10.948,59.686)
O4': (-1.133,-9.855,61.513)
C8: (-3.076,-10.118,63.568)
O2': (0.256,-12.717,63.091)
C6: (-2.738,-9.747,67.050)
C5: (-2.715,-9.919,65.652)
C4: (-1.486,-10.169,65.072)
P: (-4.587,-12.128,60.123)
C4': (-0.944,-10.686,60.339)
C2': (-0.677,-12.035,62.275)
C2: (-0.450,-10.086,67.012)
N1: (-1.564,-9.839,67.710)
N3: (-0.304,-10.266,65.700)
N6: (-3.854,-9.500,67.744)
N7: (-3.713,-9.889,64.692)
N9: (-1.730,-10.296,63.724)
O5': (-3.029,-11.915,60.422)
O3': (1.191,-11.737,60.740)
OP2: (-5.295,-12.354,61.402)
C3': (-0.215,-11.931,60.826)
C1': (-0.751,-10.566,62.675)
C5': (-2.290,-10.948,59.686)
O4': (-1.133,-9.855,61.513)
C8: (-3.076,-10.118,63.568)
O2': (0.256,-12.717,63.091)
C6: (-2.738,-9.747,67.050)
C5: (-2.715,-9.919,65.652)
C4: (-1.486,-10.169,65.072)
P: (-4.587,-12.128,60.123)
C4': (-0.944,-10.686,60.339)
C2': (-0.677,-12.035,62.275)
C2: (-0.450,-10.086,67.012)
N1: (-1.564,-9.839,67.710)
N3: (-0.304,-10.266,65.700)
N6: (-3.854,-9.500,67.744)
N7: (-3.713,-9.889,64.692)
N9: (-1.730,-10.296,63.724)
O5': (-3.029,-11.915,60.422)
O3': (1.191,-11.737,60.740)
Image (generated by PyMOL):