Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:554:558
Extra
PDB:
ATOM 1 O3' G A 53 140.573 -25.320 173.626 1.00 53.99 O
ATOM 2 P A A 54 139.264 -24.727 172.941 1.00 57.34 P
ATOM 3 OP1 A A 54 139.595 -24.448 171.522 1.00 57.92 O
ATOM 4 OP2 A A 54 138.810 -23.627 173.779 1.00 56.77 O
ATOM 5 O5' A A 54 138.221 -25.932 173.035 1.00 57.57 O
ATOM 6 C5' A A 54 136.822 -25.671 173.101 1.00 57.56 C
ATOM 7 C4' A A 54 136.025 -26.910 173.411 1.00 57.71 C
ATOM 8 O4' A A 54 136.223 -27.303 174.797 1.00 57.16 O
ATOM 9 C3' A A 54 134.517 -26.765 173.303 1.00 57.81 C
ATOM 10 O3' A A 54 134.048 -26.761 171.967 1.00 58.45 O
ATOM 11 C2' A A 54 134.024 -27.938 174.149 1.00 57.70 C
ATOM 12 O2' A A 54 134.188 -29.178 173.483 1.00 58.26 O
ATOM 13 C1' A A 54 135.022 -27.881 175.302 1.00 57.12 C
ATOM 14 N9 A A 54 134.498 -27.039 176.388 1.00 56.50 N
ATOM 15 C8 A A 54 134.937 -25.858 176.893 1.00 56.02 C
ATOM 16 N7 A A 54 134.160 -25.404 177.852 1.00 55.56 N
ATOM 17 C5 A A 54 133.137 -26.328 177.936 1.00 55.78 C
ATOM 18 C6 A A 54 132.018 -26.402 178.760 1.00 55.52 C
ATOM 19 N6 A A 54 131.703 -25.486 179.682 1.00 54.98 N
ATOM 20 N1 A A 54 131.230 -27.477 178.581 1.00 55.87 N
ATOM 21 C2 A A 54 131.551 -28.391 177.660 1.00 56.43 C
ATOM 22 N3 A A 54 132.587 -28.430 176.835 1.00 56.72 N
ATOM 23 C4 A A 54 133.333 -27.340 177.035 1.00 56.36 C
ATOM 24 P G A 55 132.938 -25.683 171.457 1.00 54.57 P
ATOM 25 OP1 G A 55 133.131 -25.545 169.996 1.00 55.21 O
ATOM 26 OP2 G A 55 133.036 -24.466 172.287 1.00 53.94 O
ATOM 27 O5' G A 55 131.560 -26.434 171.771 1.00 54.67 O
TER
ATOM 1 O3' A B 57 126.853 -32.135 174.653 1.00 55.89 O
ATOM 2 P A B 58 127.796 -33.436 174.525 1.00 55.93 P
ATOM 3 OP1 A B 58 128.265 -33.517 173.130 1.00 56.53 O
ATOM 4 OP2 A B 58 127.059 -34.564 175.093 1.00 56.01 O
ATOM 5 O5' A B 58 129.011 -33.077 175.480 1.00 55.31 O
ATOM 6 C5' A B 58 129.729 -31.862 175.360 1.00 55.02 C
ATOM 7 C4' A B 58 130.602 -31.669 176.560 1.00 54.39 C
ATOM 8 O4' A B 58 129.767 -31.411 177.717 1.00 53.89 O
ATOM 9 C3' A B 58 131.409 -32.881 176.959 1.00 54.43 C
ATOM 10 O3' A B 58 132.609 -32.999 176.228 1.00 54.69 O
ATOM 11 C2' A B 58 131.608 -32.694 178.462 1.00 53.73 C
ATOM 12 O2' A B 58 132.657 -31.781 178.722 1.00 53.33 O
ATOM 13 C1' A B 58 130.301 -32.030 178.865 1.00 53.51 C
ATOM 14 N9 A B 58 129.318 -33.003 179.363 1.00 53.60 N
ATOM 15 C8 A B 58 128.203 -33.408 178.703 1.00 54.07 C
ATOM 16 N7 A B 58 127.480 -34.275 179.356 1.00 54.07 N
ATOM 17 C5 A B 58 128.156 -34.461 180.531 1.00 53.56 C
ATOM 18 C6 A B 58 127.889 -35.282 181.627 1.00 53.34 C
ATOM 19 N6 A B 58 126.842 -36.069 181.749 1.00 53.58 N
ATOM 20 N1 A B 58 128.777 -35.238 182.635 1.00 52.84 N
ATOM 21 C2 A B 58 129.837 -34.413 182.515 1.00 52.60 C
ATOM 22 N3 A B 58 130.202 -33.592 181.525 1.00 52.77 N
ATOM 23 C4 A B 58 129.301 -33.676 180.547 1.00 53.27 C
ATOM 24 P A B 59 133.155 -34.442 175.835 1.00 53.45 P
ATOM 25 OP1 A B 59 134.476 -34.265 175.214 1.00 53.59 O
ATOM 26 OP2 A B 59 132.112 -35.080 175.046 1.00 54.02 O
ATOM 27 O5' A B 59 133.285 -35.167 177.246 1.00 53.00 O
TER
ATOM 2 P A A 54 139.264 -24.727 172.941 1.00 57.34 P
ATOM 3 OP1 A A 54 139.595 -24.448 171.522 1.00 57.92 O
ATOM 4 OP2 A A 54 138.810 -23.627 173.779 1.00 56.77 O
ATOM 5 O5' A A 54 138.221 -25.932 173.035 1.00 57.57 O
ATOM 6 C5' A A 54 136.822 -25.671 173.101 1.00 57.56 C
ATOM 7 C4' A A 54 136.025 -26.910 173.411 1.00 57.71 C
ATOM 8 O4' A A 54 136.223 -27.303 174.797 1.00 57.16 O
ATOM 9 C3' A A 54 134.517 -26.765 173.303 1.00 57.81 C
ATOM 10 O3' A A 54 134.048 -26.761 171.967 1.00 58.45 O
ATOM 11 C2' A A 54 134.024 -27.938 174.149 1.00 57.70 C
ATOM 12 O2' A A 54 134.188 -29.178 173.483 1.00 58.26 O
ATOM 13 C1' A A 54 135.022 -27.881 175.302 1.00 57.12 C
ATOM 14 N9 A A 54 134.498 -27.039 176.388 1.00 56.50 N
ATOM 15 C8 A A 54 134.937 -25.858 176.893 1.00 56.02 C
ATOM 16 N7 A A 54 134.160 -25.404 177.852 1.00 55.56 N
ATOM 17 C5 A A 54 133.137 -26.328 177.936 1.00 55.78 C
ATOM 18 C6 A A 54 132.018 -26.402 178.760 1.00 55.52 C
ATOM 19 N6 A A 54 131.703 -25.486 179.682 1.00 54.98 N
ATOM 20 N1 A A 54 131.230 -27.477 178.581 1.00 55.87 N
ATOM 21 C2 A A 54 131.551 -28.391 177.660 1.00 56.43 C
ATOM 22 N3 A A 54 132.587 -28.430 176.835 1.00 56.72 N
ATOM 23 C4 A A 54 133.333 -27.340 177.035 1.00 56.36 C
ATOM 24 P G A 55 132.938 -25.683 171.457 1.00 54.57 P
ATOM 25 OP1 G A 55 133.131 -25.545 169.996 1.00 55.21 O
ATOM 26 OP2 G A 55 133.036 -24.466 172.287 1.00 53.94 O
ATOM 27 O5' G A 55 131.560 -26.434 171.771 1.00 54.67 O
TER
ATOM 1 O3' A B 57 126.853 -32.135 174.653 1.00 55.89 O
ATOM 2 P A B 58 127.796 -33.436 174.525 1.00 55.93 P
ATOM 3 OP1 A B 58 128.265 -33.517 173.130 1.00 56.53 O
ATOM 4 OP2 A B 58 127.059 -34.564 175.093 1.00 56.01 O
ATOM 5 O5' A B 58 129.011 -33.077 175.480 1.00 55.31 O
ATOM 6 C5' A B 58 129.729 -31.862 175.360 1.00 55.02 C
ATOM 7 C4' A B 58 130.602 -31.669 176.560 1.00 54.39 C
ATOM 8 O4' A B 58 129.767 -31.411 177.717 1.00 53.89 O
ATOM 9 C3' A B 58 131.409 -32.881 176.959 1.00 54.43 C
ATOM 10 O3' A B 58 132.609 -32.999 176.228 1.00 54.69 O
ATOM 11 C2' A B 58 131.608 -32.694 178.462 1.00 53.73 C
ATOM 12 O2' A B 58 132.657 -31.781 178.722 1.00 53.33 O
ATOM 13 C1' A B 58 130.301 -32.030 178.865 1.00 53.51 C
ATOM 14 N9 A B 58 129.318 -33.003 179.363 1.00 53.60 N
ATOM 15 C8 A B 58 128.203 -33.408 178.703 1.00 54.07 C
ATOM 16 N7 A B 58 127.480 -34.275 179.356 1.00 54.07 N
ATOM 17 C5 A B 58 128.156 -34.461 180.531 1.00 53.56 C
ATOM 18 C6 A B 58 127.889 -35.282 181.627 1.00 53.34 C
ATOM 19 N6 A B 58 126.842 -36.069 181.749 1.00 53.58 N
ATOM 20 N1 A B 58 128.777 -35.238 182.635 1.00 52.84 N
ATOM 21 C2 A B 58 129.837 -34.413 182.515 1.00 52.60 C
ATOM 22 N3 A B 58 130.202 -33.592 181.525 1.00 52.77 N
ATOM 23 C4 A B 58 129.301 -33.676 180.547 1.00 53.27 C
ATOM 24 P A B 59 133.155 -34.442 175.835 1.00 53.45 P
ATOM 25 OP1 A B 59 134.476 -34.265 175.214 1.00 53.59 O
ATOM 26 OP2 A B 59 132.112 -35.080 175.046 1.00 54.02 O
ATOM 27 O5' A B 59 133.285 -35.167 177.246 1.00 53.00 O
TER
Atoms:
OP1: (139.595,-24.448,171.522)
OP2: (138.810,-23.627,173.779)
C3': (134.517,-26.765,173.303)
C1': (135.022,-27.881,175.302)
C5': (136.822,-25.671,173.101)
O4': (136.223,-27.303,174.797)
C8: (134.937,-25.858,176.893)
O2': (134.188,-29.178,173.483)
C6: (132.018,-26.402,178.760)
C5: (133.137,-26.328,177.936)
C4: (133.333,-27.340,177.035)
P: (139.264,-24.727,172.941)
C4': (136.025,-26.910,173.411)
C2': (134.024,-27.938,174.149)
C2: (131.551,-28.391,177.660)
N1: (131.230,-27.477,178.581)
N3: (132.587,-28.430,176.835)
N6: (131.703,-25.486,179.682)
N7: (134.160,-25.404,177.852)
N9: (134.498,-27.039,176.388)
O5': (138.221,-25.932,173.035)
O3': (134.048,-26.761,171.967)
OP2: (138.810,-23.627,173.779)
C3': (134.517,-26.765,173.303)
C1': (135.022,-27.881,175.302)
C5': (136.822,-25.671,173.101)
O4': (136.223,-27.303,174.797)
C8: (134.937,-25.858,176.893)
O2': (134.188,-29.178,173.483)
C6: (132.018,-26.402,178.760)
C5: (133.137,-26.328,177.936)
C4: (133.333,-27.340,177.035)
P: (139.264,-24.727,172.941)
C4': (136.025,-26.910,173.411)
C2': (134.024,-27.938,174.149)
C2: (131.551,-28.391,177.660)
N1: (131.230,-27.477,178.581)
N3: (132.587,-28.430,176.835)
N6: (131.703,-25.486,179.682)
N7: (134.160,-25.404,177.852)
N9: (134.498,-27.039,176.388)
O5': (138.221,-25.932,173.035)
O3': (134.048,-26.761,171.967)
OP1: (128.265,-33.517,173.130)
OP2: (127.059,-34.564,175.093)
C3': (131.409,-32.881,176.959)
C1': (130.301,-32.030,178.865)
C5': (129.729,-31.862,175.360)
O4': (129.767,-31.411,177.717)
C8: (128.203,-33.408,178.703)
O2': (132.657,-31.781,178.722)
C6: (127.889,-35.282,181.627)
C5: (128.156,-34.461,180.531)
C4: (129.301,-33.676,180.547)
P: (127.796,-33.436,174.525)
C4': (130.602,-31.669,176.560)
C2': (131.608,-32.694,178.462)
C2: (129.837,-34.413,182.515)
N1: (128.777,-35.238,182.635)
N3: (130.202,-33.592,181.525)
N6: (126.842,-36.069,181.749)
N7: (127.480,-34.275,179.356)
N9: (129.318,-33.003,179.363)
O5': (129.011,-33.077,175.480)
O3': (132.609,-32.999,176.228)
OP2: (127.059,-34.564,175.093)
C3': (131.409,-32.881,176.959)
C1': (130.301,-32.030,178.865)
C5': (129.729,-31.862,175.360)
O4': (129.767,-31.411,177.717)
C8: (128.203,-33.408,178.703)
O2': (132.657,-31.781,178.722)
C6: (127.889,-35.282,181.627)
C5: (128.156,-34.461,180.531)
C4: (129.301,-33.676,180.547)
P: (127.796,-33.436,174.525)
C4': (130.602,-31.669,176.560)
C2': (131.608,-32.694,178.462)
C2: (129.837,-34.413,182.515)
N1: (128.777,-35.238,182.635)
N3: (130.202,-33.592,181.525)
N6: (126.842,-36.069,181.749)
N7: (127.480,-34.275,179.356)
N9: (129.318,-33.003,179.363)
O5': (129.011,-33.077,175.480)
O3': (132.609,-32.999,176.228)
Image (generated by PyMOL):