Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2861:A2843
Extra
PDB:
ATOM 1 O3' G A2860 -15.302 -52.870 -50.041 1.00 0.02 O
ATOM 2 P A A2861 -15.412 -54.466 -49.663 1.00 0.01 P
ATOM 3 OP1 A A2861 -15.075 -55.247 -50.867 1.00 0.01 O
ATOM 4 OP2 A A2861 -16.702 -54.683 -49.031 1.00 0.01 O
ATOM 5 O5' A A2861 -14.275 -54.645 -48.570 1.00 0.01 O
ATOM 6 C5' A A2861 -12.904 -54.424 -48.887 1.00 0.01 C
ATOM 7 C4' A A2861 -12.179 -53.657 -47.796 1.00 0.01 C
ATOM 8 O4' A A2861 -12.754 -52.338 -47.669 1.00 0.01 O
ATOM 9 C3' A A2861 -12.256 -54.244 -46.374 1.00 0.01 C
ATOM 10 O3' A A2861 -11.305 -55.267 -46.129 1.00 0.01 O
ATOM 11 C2' A A2861 -12.079 -53.021 -45.490 1.00 0.01 C
ATOM 12 O2' A A2861 -10.706 -52.635 -45.393 1.00 0.01 O
ATOM 13 C1' A A2861 -12.824 -51.970 -46.300 1.00 0.01 C
ATOM 14 N9 A A2861 -14.250 -51.867 -45.908 1.00 0.01 N
ATOM 15 C8 A A2861 -15.340 -51.913 -46.748 1.00 0.01 C
ATOM 16 N7 A A2861 -16.489 -51.733 -46.138 1.00 0.01 N
ATOM 17 C5 A A2861 -16.127 -51.557 -44.820 1.00 0.01 C
ATOM 18 C6 A A2861 -16.888 -51.315 -43.691 1.00 0.01 C
ATOM 19 N6 A A2861 -18.213 -51.237 -43.746 1.00 0.01 N
ATOM 20 N1 A A2861 -16.274 -51.157 -42.512 1.00 0.01 N
ATOM 21 C2 A A2861 -14.955 -51.235 -42.491 1.00 0.01 C
ATOM 22 N3 A A2861 -14.125 -51.452 -43.493 1.00 0.01 N
ATOM 23 C4 A A2861 -14.771 -51.621 -44.652 1.00 0.01 C
ATOM 24 P G A2862 -11.800 -56.745 -45.803 1.00 0.01 P
ATOM 25 OP1 G A2862 -10.696 -57.669 -46.136 1.00 0.01 O
ATOM 26 OP2 G A2862 -13.086 -56.921 -46.469 1.00 0.01 O
ATOM 27 O5' G A2862 -12.014 -56.686 -44.243 1.00 0.01 O
TER
ATOM 1 O3' U B2842 -13.155 -47.907 -43.826 1.00 0.01 O
ATOM 2 P A B2843 -12.085 -47.456 -42.743 1.00 0.01 P
ATOM 3 OP1 A B2843 -12.531 -46.163 -42.226 1.00 0.01 O
ATOM 4 OP2 A B2843 -10.740 -47.566 -43.365 1.00 0.01 O
ATOM 5 O5' A B2843 -12.241 -48.557 -41.630 1.00 0.01 O
ATOM 6 C5' A B2843 -12.978 -48.308 -40.461 1.00 0.01 C
ATOM 7 C4' A B2843 -12.646 -49.324 -39.429 1.00 0.01 C
ATOM 8 O4' A B2843 -12.771 -50.641 -40.013 1.00 0.01 O
ATOM 9 C3' A B2843 -11.225 -49.285 -38.944 1.00 0.01 C
ATOM 10 O3' A B2843 -11.011 -48.311 -37.958 1.00 0.01 O
ATOM 11 C2' A B2843 -11.015 -50.686 -38.451 1.00 0.01 C
ATOM 12 O2' A B2843 -11.650 -50.851 -37.203 1.00 0.01 O
ATOM 13 C1' A B2843 -11.781 -51.485 -39.495 1.00 0.01 C
ATOM 14 N9 A B2843 -10.918 -51.919 -40.599 1.00 0.01 N
ATOM 15 C8 A B2843 -10.927 -51.427 -41.865 1.00 0.01 C
ATOM 16 N7 A B2843 -10.046 -51.997 -42.652 1.00 0.01 N
ATOM 17 C5 A B2843 -9.419 -52.929 -41.846 1.00 0.01 C
ATOM 18 C6 A B2843 -8.392 -53.851 -42.088 1.00 0.01 C
ATOM 19 N6 A B2843 -7.784 -53.990 -43.248 1.00 0.01 N
ATOM 20 N1 A B2843 -7.988 -54.660 -41.098 1.00 0.01 N
ATOM 21 C2 A B2843 -8.602 -54.517 -39.917 1.00 0.01 C
ATOM 22 N3 A B2843 -9.580 -53.676 -39.571 1.00 0.01 N
ATOM 23 C4 A B2843 -9.955 -52.892 -40.588 1.00 0.01 C
ATOM 24 P A B2844 -9.599 -47.583 -37.876 1.00 0.01 P
ATOM 25 OP1 A B2844 -9.649 -46.630 -36.762 1.00 0.01 O
ATOM 26 OP2 A B2844 -9.308 -47.091 -39.227 1.00 0.01 O
ATOM 27 O5' A B2844 -8.616 -48.759 -37.520 1.00 0.01 O
TER
ATOM 2 P A A2861 -15.412 -54.466 -49.663 1.00 0.01 P
ATOM 3 OP1 A A2861 -15.075 -55.247 -50.867 1.00 0.01 O
ATOM 4 OP2 A A2861 -16.702 -54.683 -49.031 1.00 0.01 O
ATOM 5 O5' A A2861 -14.275 -54.645 -48.570 1.00 0.01 O
ATOM 6 C5' A A2861 -12.904 -54.424 -48.887 1.00 0.01 C
ATOM 7 C4' A A2861 -12.179 -53.657 -47.796 1.00 0.01 C
ATOM 8 O4' A A2861 -12.754 -52.338 -47.669 1.00 0.01 O
ATOM 9 C3' A A2861 -12.256 -54.244 -46.374 1.00 0.01 C
ATOM 10 O3' A A2861 -11.305 -55.267 -46.129 1.00 0.01 O
ATOM 11 C2' A A2861 -12.079 -53.021 -45.490 1.00 0.01 C
ATOM 12 O2' A A2861 -10.706 -52.635 -45.393 1.00 0.01 O
ATOM 13 C1' A A2861 -12.824 -51.970 -46.300 1.00 0.01 C
ATOM 14 N9 A A2861 -14.250 -51.867 -45.908 1.00 0.01 N
ATOM 15 C8 A A2861 -15.340 -51.913 -46.748 1.00 0.01 C
ATOM 16 N7 A A2861 -16.489 -51.733 -46.138 1.00 0.01 N
ATOM 17 C5 A A2861 -16.127 -51.557 -44.820 1.00 0.01 C
ATOM 18 C6 A A2861 -16.888 -51.315 -43.691 1.00 0.01 C
ATOM 19 N6 A A2861 -18.213 -51.237 -43.746 1.00 0.01 N
ATOM 20 N1 A A2861 -16.274 -51.157 -42.512 1.00 0.01 N
ATOM 21 C2 A A2861 -14.955 -51.235 -42.491 1.00 0.01 C
ATOM 22 N3 A A2861 -14.125 -51.452 -43.493 1.00 0.01 N
ATOM 23 C4 A A2861 -14.771 -51.621 -44.652 1.00 0.01 C
ATOM 24 P G A2862 -11.800 -56.745 -45.803 1.00 0.01 P
ATOM 25 OP1 G A2862 -10.696 -57.669 -46.136 1.00 0.01 O
ATOM 26 OP2 G A2862 -13.086 -56.921 -46.469 1.00 0.01 O
ATOM 27 O5' G A2862 -12.014 -56.686 -44.243 1.00 0.01 O
TER
ATOM 1 O3' U B2842 -13.155 -47.907 -43.826 1.00 0.01 O
ATOM 2 P A B2843 -12.085 -47.456 -42.743 1.00 0.01 P
ATOM 3 OP1 A B2843 -12.531 -46.163 -42.226 1.00 0.01 O
ATOM 4 OP2 A B2843 -10.740 -47.566 -43.365 1.00 0.01 O
ATOM 5 O5' A B2843 -12.241 -48.557 -41.630 1.00 0.01 O
ATOM 6 C5' A B2843 -12.978 -48.308 -40.461 1.00 0.01 C
ATOM 7 C4' A B2843 -12.646 -49.324 -39.429 1.00 0.01 C
ATOM 8 O4' A B2843 -12.771 -50.641 -40.013 1.00 0.01 O
ATOM 9 C3' A B2843 -11.225 -49.285 -38.944 1.00 0.01 C
ATOM 10 O3' A B2843 -11.011 -48.311 -37.958 1.00 0.01 O
ATOM 11 C2' A B2843 -11.015 -50.686 -38.451 1.00 0.01 C
ATOM 12 O2' A B2843 -11.650 -50.851 -37.203 1.00 0.01 O
ATOM 13 C1' A B2843 -11.781 -51.485 -39.495 1.00 0.01 C
ATOM 14 N9 A B2843 -10.918 -51.919 -40.599 1.00 0.01 N
ATOM 15 C8 A B2843 -10.927 -51.427 -41.865 1.00 0.01 C
ATOM 16 N7 A B2843 -10.046 -51.997 -42.652 1.00 0.01 N
ATOM 17 C5 A B2843 -9.419 -52.929 -41.846 1.00 0.01 C
ATOM 18 C6 A B2843 -8.392 -53.851 -42.088 1.00 0.01 C
ATOM 19 N6 A B2843 -7.784 -53.990 -43.248 1.00 0.01 N
ATOM 20 N1 A B2843 -7.988 -54.660 -41.098 1.00 0.01 N
ATOM 21 C2 A B2843 -8.602 -54.517 -39.917 1.00 0.01 C
ATOM 22 N3 A B2843 -9.580 -53.676 -39.571 1.00 0.01 N
ATOM 23 C4 A B2843 -9.955 -52.892 -40.588 1.00 0.01 C
ATOM 24 P A B2844 -9.599 -47.583 -37.876 1.00 0.01 P
ATOM 25 OP1 A B2844 -9.649 -46.630 -36.762 1.00 0.01 O
ATOM 26 OP2 A B2844 -9.308 -47.091 -39.227 1.00 0.01 O
ATOM 27 O5' A B2844 -8.616 -48.759 -37.520 1.00 0.01 O
TER
Atoms:
OP1: (-15.075,-55.247,-50.867)
OP2: (-16.702,-54.683,-49.031)
C3': (-12.256,-54.244,-46.374)
C1': (-12.824,-51.970,-46.300)
C5': (-12.904,-54.424,-48.887)
O4': (-12.754,-52.338,-47.669)
C8: (-15.340,-51.913,-46.748)
O2': (-10.706,-52.635,-45.393)
C6: (-16.888,-51.315,-43.691)
C5: (-16.127,-51.557,-44.820)
C4: (-14.771,-51.621,-44.652)
P: (-15.412,-54.466,-49.663)
C4': (-12.179,-53.657,-47.796)
C2': (-12.079,-53.021,-45.490)
C2: (-14.955,-51.235,-42.491)
N1: (-16.274,-51.157,-42.512)
N3: (-14.125,-51.452,-43.493)
N6: (-18.213,-51.237,-43.746)
N7: (-16.489,-51.733,-46.138)
N9: (-14.250,-51.867,-45.908)
O5': (-14.275,-54.645,-48.570)
O3': (-11.305,-55.267,-46.129)
OP2: (-16.702,-54.683,-49.031)
C3': (-12.256,-54.244,-46.374)
C1': (-12.824,-51.970,-46.300)
C5': (-12.904,-54.424,-48.887)
O4': (-12.754,-52.338,-47.669)
C8: (-15.340,-51.913,-46.748)
O2': (-10.706,-52.635,-45.393)
C6: (-16.888,-51.315,-43.691)
C5: (-16.127,-51.557,-44.820)
C4: (-14.771,-51.621,-44.652)
P: (-15.412,-54.466,-49.663)
C4': (-12.179,-53.657,-47.796)
C2': (-12.079,-53.021,-45.490)
C2: (-14.955,-51.235,-42.491)
N1: (-16.274,-51.157,-42.512)
N3: (-14.125,-51.452,-43.493)
N6: (-18.213,-51.237,-43.746)
N7: (-16.489,-51.733,-46.138)
N9: (-14.250,-51.867,-45.908)
O5': (-14.275,-54.645,-48.570)
O3': (-11.305,-55.267,-46.129)
OP1: (-12.531,-46.163,-42.226)
OP2: (-10.740,-47.566,-43.365)
C3': (-11.225,-49.285,-38.944)
C1': (-11.781,-51.485,-39.495)
C5': (-12.978,-48.308,-40.461)
O4': (-12.771,-50.641,-40.013)
C8: (-10.927,-51.427,-41.865)
O2': (-11.650,-50.851,-37.203)
C6: (-8.392,-53.851,-42.088)
C5: (-9.419,-52.929,-41.846)
C4: (-9.955,-52.892,-40.588)
P: (-12.085,-47.456,-42.743)
C4': (-12.646,-49.324,-39.429)
C2': (-11.015,-50.686,-38.451)
C2: (-8.602,-54.517,-39.917)
N1: (-7.988,-54.660,-41.098)
N3: (-9.580,-53.676,-39.571)
N6: (-7.784,-53.990,-43.248)
N7: (-10.046,-51.997,-42.652)
N9: (-10.918,-51.919,-40.599)
O5': (-12.241,-48.557,-41.630)
O3': (-11.011,-48.311,-37.958)
OP2: (-10.740,-47.566,-43.365)
C3': (-11.225,-49.285,-38.944)
C1': (-11.781,-51.485,-39.495)
C5': (-12.978,-48.308,-40.461)
O4': (-12.771,-50.641,-40.013)
C8: (-10.927,-51.427,-41.865)
O2': (-11.650,-50.851,-37.203)
C6: (-8.392,-53.851,-42.088)
C5: (-9.419,-52.929,-41.846)
C4: (-9.955,-52.892,-40.588)
P: (-12.085,-47.456,-42.743)
C4': (-12.646,-49.324,-39.429)
C2': (-11.015,-50.686,-38.451)
C2: (-8.602,-54.517,-39.917)
N1: (-7.988,-54.660,-41.098)
N3: (-9.580,-53.676,-39.571)
N6: (-7.784,-53.990,-43.248)
N7: (-10.046,-51.997,-42.652)
N9: (-10.918,-51.919,-40.599)
O5': (-12.241,-48.557,-41.630)
O3': (-11.011,-48.311,-37.958)
Image (generated by PyMOL):