Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0293:0315
Extra
PDB:
ATOM 1 O3' G A 292 18.037 137.493 18.564 1.00 59.55 O
ATOM 2 P A A 293 17.149 138.476 19.471 1.00 60.06 P
ATOM 3 OP1 A A 293 16.880 139.685 18.657 1.00 60.36 O
ATOM 4 OP2 A A 293 17.776 138.623 20.810 1.00 60.26 O
ATOM 5 O5' A A 293 15.785 137.675 19.640 1.00 57.69 O
ATOM 6 C5' A A 293 15.186 137.003 18.518 1.00 57.04 C
ATOM 7 C4' A A 293 14.289 135.892 18.996 1.00 56.71 C
ATOM 8 O4' A A 293 15.086 134.848 19.603 1.00 57.06 O
ATOM 9 C3' A A 293 13.295 136.302 20.067 1.00 56.31 C
ATOM 10 O3' A A 293 12.133 136.859 19.465 1.00 53.83 O
ATOM 11 C2' A A 293 13.017 134.991 20.797 1.00 57.33 C
ATOM 12 O2' A A 293 12.035 134.197 20.166 1.00 58.19 O
ATOM 13 C1' A A 293 14.377 134.290 20.698 1.00 58.22 C
ATOM 14 N9 A A 293 15.225 134.381 21.887 1.00 58.38 N
ATOM 15 C8 A A 293 15.957 135.454 22.331 1.00 58.25 C
ATOM 16 N7 A A 293 16.647 135.211 23.416 1.00 57.68 N
ATOM 17 C5 A A 293 16.343 133.892 23.714 1.00 58.30 C
ATOM 18 C6 A A 293 16.759 133.040 24.745 1.00 58.08 C
ATOM 19 N6 A A 293 17.605 133.406 25.709 1.00 57.84 N
ATOM 20 N1 A A 293 16.273 131.780 24.752 1.00 57.77 N
ATOM 21 C2 A A 293 15.425 131.415 23.785 1.00 57.58 C
ATOM 22 N3 A A 293 14.959 132.125 22.763 1.00 57.57 N
ATOM 23 C4 A A 293 15.464 133.370 22.785 1.00 58.17 C
ATOM 24 P A A 294 11.480 138.189 20.076 1.00 53.65 P
ATOM 25 OP1 A A 294 10.443 138.663 19.126 1.00 54.74 O
ATOM 26 OP2 A A 294 12.570 139.114 20.496 1.00 53.60 O
ATOM 27 O5' A A 294 10.722 137.660 21.363 1.00 51.67 O
TER
ATOM 1 O3' G B 314 10.540 130.982 20.294 1.00 44.62 O
ATOM 2 P A B 315 10.728 129.566 19.568 1.00 46.13 P
ATOM 3 OP1 A B 315 11.359 129.840 18.252 1.00 44.87 O
ATOM 4 OP2 A B 315 9.437 128.835 19.635 1.00 46.35 O
ATOM 5 O5' A B 315 11.794 128.791 20.460 1.00 46.73 O
ATOM 6 C5' A B 315 13.146 129.264 20.572 1.00 45.21 C
ATOM 7 C4' A B 315 13.866 128.514 21.659 1.00 43.90 C
ATOM 8 O4' A B 315 13.228 128.762 22.937 1.00 43.71 O
ATOM 9 C3' A B 315 13.808 127.010 21.510 1.00 43.60 C
ATOM 10 O3' A B 315 14.802 126.565 20.607 1.00 44.11 O
ATOM 11 C2' A B 315 14.055 126.529 22.932 1.00 43.60 C
ATOM 12 O2' A B 315 15.422 126.513 23.283 1.00 39.77 O
ATOM 13 C1' A B 315 13.318 127.599 23.744 1.00 44.71 C
ATOM 14 N9 A B 315 11.967 127.200 24.139 1.00 47.57 N
ATOM 15 C8 A B 315 10.779 127.491 23.519 1.00 48.23 C
ATOM 16 N7 A B 315 9.733 126.971 24.112 1.00 49.14 N
ATOM 17 C5 A B 315 10.266 126.289 25.196 1.00 49.17 C
ATOM 18 C6 A B 315 9.678 125.516 26.216 1.00 49.29 C
ATOM 19 N6 A B 315 8.370 125.276 26.306 1.00 49.53 N
ATOM 20 N1 A B 315 10.493 124.986 27.151 1.00 50.59 N
ATOM 21 C2 A B 315 11.806 125.213 27.057 1.00 50.20 C
ATOM 22 N3 A B 315 12.477 125.911 26.147 1.00 49.87 N
ATOM 23 C4 A B 315 11.640 126.430 25.232 1.00 48.95 C
ATOM 24 P U B 316 14.372 126.010 19.168 1.00 44.73 P
ATOM 25 OP1 U B 316 14.460 127.145 18.229 1.00 46.06 O
ATOM 26 OP2 U B 316 13.091 125.282 19.314 1.00 44.42 O
ATOM 27 O5' U B 316 15.518 124.961 18.822 1.00 43.92 O
TER
ATOM 2 P A A 293 17.149 138.476 19.471 1.00 60.06 P
ATOM 3 OP1 A A 293 16.880 139.685 18.657 1.00 60.36 O
ATOM 4 OP2 A A 293 17.776 138.623 20.810 1.00 60.26 O
ATOM 5 O5' A A 293 15.785 137.675 19.640 1.00 57.69 O
ATOM 6 C5' A A 293 15.186 137.003 18.518 1.00 57.04 C
ATOM 7 C4' A A 293 14.289 135.892 18.996 1.00 56.71 C
ATOM 8 O4' A A 293 15.086 134.848 19.603 1.00 57.06 O
ATOM 9 C3' A A 293 13.295 136.302 20.067 1.00 56.31 C
ATOM 10 O3' A A 293 12.133 136.859 19.465 1.00 53.83 O
ATOM 11 C2' A A 293 13.017 134.991 20.797 1.00 57.33 C
ATOM 12 O2' A A 293 12.035 134.197 20.166 1.00 58.19 O
ATOM 13 C1' A A 293 14.377 134.290 20.698 1.00 58.22 C
ATOM 14 N9 A A 293 15.225 134.381 21.887 1.00 58.38 N
ATOM 15 C8 A A 293 15.957 135.454 22.331 1.00 58.25 C
ATOM 16 N7 A A 293 16.647 135.211 23.416 1.00 57.68 N
ATOM 17 C5 A A 293 16.343 133.892 23.714 1.00 58.30 C
ATOM 18 C6 A A 293 16.759 133.040 24.745 1.00 58.08 C
ATOM 19 N6 A A 293 17.605 133.406 25.709 1.00 57.84 N
ATOM 20 N1 A A 293 16.273 131.780 24.752 1.00 57.77 N
ATOM 21 C2 A A 293 15.425 131.415 23.785 1.00 57.58 C
ATOM 22 N3 A A 293 14.959 132.125 22.763 1.00 57.57 N
ATOM 23 C4 A A 293 15.464 133.370 22.785 1.00 58.17 C
ATOM 24 P A A 294 11.480 138.189 20.076 1.00 53.65 P
ATOM 25 OP1 A A 294 10.443 138.663 19.126 1.00 54.74 O
ATOM 26 OP2 A A 294 12.570 139.114 20.496 1.00 53.60 O
ATOM 27 O5' A A 294 10.722 137.660 21.363 1.00 51.67 O
TER
ATOM 1 O3' G B 314 10.540 130.982 20.294 1.00 44.62 O
ATOM 2 P A B 315 10.728 129.566 19.568 1.00 46.13 P
ATOM 3 OP1 A B 315 11.359 129.840 18.252 1.00 44.87 O
ATOM 4 OP2 A B 315 9.437 128.835 19.635 1.00 46.35 O
ATOM 5 O5' A B 315 11.794 128.791 20.460 1.00 46.73 O
ATOM 6 C5' A B 315 13.146 129.264 20.572 1.00 45.21 C
ATOM 7 C4' A B 315 13.866 128.514 21.659 1.00 43.90 C
ATOM 8 O4' A B 315 13.228 128.762 22.937 1.00 43.71 O
ATOM 9 C3' A B 315 13.808 127.010 21.510 1.00 43.60 C
ATOM 10 O3' A B 315 14.802 126.565 20.607 1.00 44.11 O
ATOM 11 C2' A B 315 14.055 126.529 22.932 1.00 43.60 C
ATOM 12 O2' A B 315 15.422 126.513 23.283 1.00 39.77 O
ATOM 13 C1' A B 315 13.318 127.599 23.744 1.00 44.71 C
ATOM 14 N9 A B 315 11.967 127.200 24.139 1.00 47.57 N
ATOM 15 C8 A B 315 10.779 127.491 23.519 1.00 48.23 C
ATOM 16 N7 A B 315 9.733 126.971 24.112 1.00 49.14 N
ATOM 17 C5 A B 315 10.266 126.289 25.196 1.00 49.17 C
ATOM 18 C6 A B 315 9.678 125.516 26.216 1.00 49.29 C
ATOM 19 N6 A B 315 8.370 125.276 26.306 1.00 49.53 N
ATOM 20 N1 A B 315 10.493 124.986 27.151 1.00 50.59 N
ATOM 21 C2 A B 315 11.806 125.213 27.057 1.00 50.20 C
ATOM 22 N3 A B 315 12.477 125.911 26.147 1.00 49.87 N
ATOM 23 C4 A B 315 11.640 126.430 25.232 1.00 48.95 C
ATOM 24 P U B 316 14.372 126.010 19.168 1.00 44.73 P
ATOM 25 OP1 U B 316 14.460 127.145 18.229 1.00 46.06 O
ATOM 26 OP2 U B 316 13.091 125.282 19.314 1.00 44.42 O
ATOM 27 O5' U B 316 15.518 124.961 18.822 1.00 43.92 O
TER
Atoms:
OP1: (16.880,139.685,18.657)
OP2: (17.776,138.623,20.810)
C3': (13.295,136.302,20.067)
C1': (14.377,134.290,20.698)
C5': (15.186,137.003,18.518)
O4': (15.086,134.848,19.603)
C8: (15.957,135.454,22.331)
O2': (12.035,134.197,20.166)
C6: (16.759,133.040,24.745)
C5: (16.343,133.892,23.714)
C4: (15.464,133.370,22.785)
P: (17.149,138.476,19.471)
C4': (14.289,135.892,18.996)
C2': (13.017,134.991,20.797)
C2: (15.425,131.415,23.785)
N1: (16.273,131.780,24.752)
N3: (14.959,132.125,22.763)
N6: (17.605,133.406,25.709)
N7: (16.647,135.211,23.416)
N9: (15.225,134.381,21.887)
O5': (15.785,137.675,19.640)
O3': (12.133,136.859,19.465)
OP2: (17.776,138.623,20.810)
C3': (13.295,136.302,20.067)
C1': (14.377,134.290,20.698)
C5': (15.186,137.003,18.518)
O4': (15.086,134.848,19.603)
C8: (15.957,135.454,22.331)
O2': (12.035,134.197,20.166)
C6: (16.759,133.040,24.745)
C5: (16.343,133.892,23.714)
C4: (15.464,133.370,22.785)
P: (17.149,138.476,19.471)
C4': (14.289,135.892,18.996)
C2': (13.017,134.991,20.797)
C2: (15.425,131.415,23.785)
N1: (16.273,131.780,24.752)
N3: (14.959,132.125,22.763)
N6: (17.605,133.406,25.709)
N7: (16.647,135.211,23.416)
N9: (15.225,134.381,21.887)
O5': (15.785,137.675,19.640)
O3': (12.133,136.859,19.465)
OP1: (11.359,129.840,18.252)
OP2: (9.437,128.835,19.635)
C3': (13.808,127.010,21.510)
C1': (13.318,127.599,23.744)
C5': (13.146,129.264,20.572)
O4': (13.228,128.762,22.937)
C8: (10.779,127.491,23.519)
O2': (15.422,126.513,23.283)
C6: (9.678,125.516,26.216)
C5: (10.266,126.289,25.196)
C4: (11.640,126.430,25.232)
P: (10.728,129.566,19.568)
C4': (13.866,128.514,21.659)
C2': (14.055,126.529,22.932)
C2: (11.806,125.213,27.057)
N1: (10.493,124.986,27.151)
N3: (12.477,125.911,26.147)
N6: (8.370,125.276,26.306)
N7: (9.733,126.971,24.112)
N9: (11.967,127.200,24.139)
O5': (11.794,128.791,20.460)
O3': (14.802,126.565,20.607)
OP2: (9.437,128.835,19.635)
C3': (13.808,127.010,21.510)
C1': (13.318,127.599,23.744)
C5': (13.146,129.264,20.572)
O4': (13.228,128.762,22.937)
C8: (10.779,127.491,23.519)
O2': (15.422,126.513,23.283)
C6: (9.678,125.516,26.216)
C5: (10.266,126.289,25.196)
C4: (11.640,126.430,25.232)
P: (10.728,129.566,19.568)
C4': (13.866,128.514,21.659)
C2': (14.055,126.529,22.932)
C2: (11.806,125.213,27.057)
N1: (10.493,124.986,27.151)
N3: (12.477,125.911,26.147)
N6: (8.370,125.276,26.306)
N7: (9.733,126.971,24.112)
N9: (11.967,127.200,24.139)
O5': (11.794,128.791,20.460)
O3': (14.802,126.565,20.607)
Image (generated by PyMOL):