Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A511:A513
Extra
PDB:
ATOM 1 O3' A A 510 189.266 104.494 18.439 1.00104.99 O
ATOM 2 P A A 511 188.278 103.240 18.708 1.00100.26 P
ATOM 3 OP1 A A 511 187.377 103.582 19.843 1.00100.93 O
ATOM 4 OP2 A A 511 189.079 102.000 18.761 1.00 98.04 O
ATOM 5 O5' A A 511 187.375 103.174 17.418 1.00 98.02 O
ATOM 6 C5' A A 511 186.618 104.315 16.972 1.00 93.53 C
ATOM 7 C4' A A 511 185.152 103.956 16.855 1.00 90.12 C
ATOM 8 O4' A A 511 185.058 102.607 16.319 1.00 88.44 O
ATOM 9 C3' A A 511 184.337 103.946 18.142 1.00 88.69 C
ATOM 10 O3' A A 511 183.515 105.087 18.512 1.00 88.72 O
ATOM 11 C2' A A 511 184.009 102.490 18.454 1.00 87.59 C
ATOM 12 O2' A A 511 182.691 102.302 18.922 1.00 87.07 O
ATOM 13 C1' A A 511 184.147 101.832 17.082 1.00 87.69 C
ATOM 14 N9 A A 511 184.655 100.455 17.137 1.00 86.80 N
ATOM 15 C8 A A 511 185.734 99.984 17.841 1.00 87.16 C
ATOM 16 N7 A A 511 185.946 98.698 17.689 1.00 86.76 N
ATOM 17 C5 A A 511 184.940 98.291 16.826 1.00 85.38 C
ATOM 18 C6 A A 511 184.618 97.037 16.270 1.00 84.58 C
ATOM 19 N6 A A 511 185.297 95.916 16.512 1.00 84.38 N
ATOM 20 N1 A A 511 183.559 96.974 15.444 1.00 84.44 N
ATOM 21 C2 A A 511 182.874 98.094 15.196 1.00 85.69 C
ATOM 22 N3 A A 511 183.075 99.328 15.655 1.00 86.16 N
ATOM 23 C4 A A 511 184.136 99.361 16.477 1.00 86.10 C
ATOM 24 P U A 512 182.250 105.531 17.607 1.00 89.03 P
ATOM 25 OP1 U A 512 181.843 104.416 16.695 1.00 91.46 O
ATOM 26 OP2 U A 512 182.582 106.845 17.020 1.00 88.43 O
ATOM 27 O5' U A 512 181.061 105.751 18.655 1.00 87.72 O
TER
ATOM 1 O3' U B 512 179.018 102.460 19.328 1.00 82.67 O
ATOM 2 P A B 513 179.374 101.554 18.059 1.00 80.57 P
ATOM 3 OP1 A B 513 179.541 100.182 18.628 1.00 79.71 O
ATOM 4 OP2 A B 513 180.469 102.206 17.300 1.00 80.12 O
ATOM 5 O5' A B 513 178.069 101.607 17.152 1.00 79.07 O
ATOM 6 C5' A B 513 176.974 100.700 17.359 1.00 76.34 C
ATOM 7 C4' A B 513 176.838 99.776 16.174 1.00 74.01 C
ATOM 8 O4' A B 513 176.633 100.555 14.967 1.00 73.11 O
ATOM 9 C3' A B 513 178.039 98.881 15.899 1.00 73.24 C
ATOM 10 O3' A B 513 177.545 97.624 15.469 1.00 74.47 O
ATOM 11 C2' A B 513 178.749 99.603 14.756 1.00 71.99 C
ATOM 12 O2' A B 513 179.516 98.778 13.913 1.00 72.66 O
ATOM 13 C1' A B 513 177.562 100.154 13.990 1.00 71.80 C
ATOM 14 N9 A B 513 177.840 101.274 13.097 1.00 71.13 N
ATOM 15 C8 A B 513 178.312 102.528 13.387 1.00 71.93 C
ATOM 16 N7 A B 513 178.428 103.306 12.335 1.00 71.01 N
ATOM 17 C5 A B 513 178.006 102.506 11.283 1.00 70.61 C
ATOM 18 C6 A B 513 177.893 102.741 9.908 1.00 69.60 C
ATOM 19 N6 A B 513 178.204 103.897 9.334 1.00 69.06 N
ATOM 20 N1 A B 513 177.445 101.734 9.131 1.00 68.87 N
ATOM 21 C2 A B 513 177.130 100.572 9.710 1.00 69.58 C
ATOM 22 N3 A B 513 177.189 100.228 10.993 1.00 69.89 N
ATOM 23 C4 A B 513 177.644 101.252 11.736 1.00 70.93 C
ATOM 24 P C B 514 176.977 96.578 16.553 1.00 76.51 P
ATOM 25 OP1 C B 514 175.674 96.035 16.050 1.00 75.51 O
ATOM 26 OP2 C B 514 177.023 97.246 17.874 1.00 77.27 O
ATOM 27 O5' C B 514 178.046 95.404 16.555 1.00 78.39 O
TER
ATOM 2 P A A 511 188.278 103.240 18.708 1.00100.26 P
ATOM 3 OP1 A A 511 187.377 103.582 19.843 1.00100.93 O
ATOM 4 OP2 A A 511 189.079 102.000 18.761 1.00 98.04 O
ATOM 5 O5' A A 511 187.375 103.174 17.418 1.00 98.02 O
ATOM 6 C5' A A 511 186.618 104.315 16.972 1.00 93.53 C
ATOM 7 C4' A A 511 185.152 103.956 16.855 1.00 90.12 C
ATOM 8 O4' A A 511 185.058 102.607 16.319 1.00 88.44 O
ATOM 9 C3' A A 511 184.337 103.946 18.142 1.00 88.69 C
ATOM 10 O3' A A 511 183.515 105.087 18.512 1.00 88.72 O
ATOM 11 C2' A A 511 184.009 102.490 18.454 1.00 87.59 C
ATOM 12 O2' A A 511 182.691 102.302 18.922 1.00 87.07 O
ATOM 13 C1' A A 511 184.147 101.832 17.082 1.00 87.69 C
ATOM 14 N9 A A 511 184.655 100.455 17.137 1.00 86.80 N
ATOM 15 C8 A A 511 185.734 99.984 17.841 1.00 87.16 C
ATOM 16 N7 A A 511 185.946 98.698 17.689 1.00 86.76 N
ATOM 17 C5 A A 511 184.940 98.291 16.826 1.00 85.38 C
ATOM 18 C6 A A 511 184.618 97.037 16.270 1.00 84.58 C
ATOM 19 N6 A A 511 185.297 95.916 16.512 1.00 84.38 N
ATOM 20 N1 A A 511 183.559 96.974 15.444 1.00 84.44 N
ATOM 21 C2 A A 511 182.874 98.094 15.196 1.00 85.69 C
ATOM 22 N3 A A 511 183.075 99.328 15.655 1.00 86.16 N
ATOM 23 C4 A A 511 184.136 99.361 16.477 1.00 86.10 C
ATOM 24 P U A 512 182.250 105.531 17.607 1.00 89.03 P
ATOM 25 OP1 U A 512 181.843 104.416 16.695 1.00 91.46 O
ATOM 26 OP2 U A 512 182.582 106.845 17.020 1.00 88.43 O
ATOM 27 O5' U A 512 181.061 105.751 18.655 1.00 87.72 O
TER
ATOM 1 O3' U B 512 179.018 102.460 19.328 1.00 82.67 O
ATOM 2 P A B 513 179.374 101.554 18.059 1.00 80.57 P
ATOM 3 OP1 A B 513 179.541 100.182 18.628 1.00 79.71 O
ATOM 4 OP2 A B 513 180.469 102.206 17.300 1.00 80.12 O
ATOM 5 O5' A B 513 178.069 101.607 17.152 1.00 79.07 O
ATOM 6 C5' A B 513 176.974 100.700 17.359 1.00 76.34 C
ATOM 7 C4' A B 513 176.838 99.776 16.174 1.00 74.01 C
ATOM 8 O4' A B 513 176.633 100.555 14.967 1.00 73.11 O
ATOM 9 C3' A B 513 178.039 98.881 15.899 1.00 73.24 C
ATOM 10 O3' A B 513 177.545 97.624 15.469 1.00 74.47 O
ATOM 11 C2' A B 513 178.749 99.603 14.756 1.00 71.99 C
ATOM 12 O2' A B 513 179.516 98.778 13.913 1.00 72.66 O
ATOM 13 C1' A B 513 177.562 100.154 13.990 1.00 71.80 C
ATOM 14 N9 A B 513 177.840 101.274 13.097 1.00 71.13 N
ATOM 15 C8 A B 513 178.312 102.528 13.387 1.00 71.93 C
ATOM 16 N7 A B 513 178.428 103.306 12.335 1.00 71.01 N
ATOM 17 C5 A B 513 178.006 102.506 11.283 1.00 70.61 C
ATOM 18 C6 A B 513 177.893 102.741 9.908 1.00 69.60 C
ATOM 19 N6 A B 513 178.204 103.897 9.334 1.00 69.06 N
ATOM 20 N1 A B 513 177.445 101.734 9.131 1.00 68.87 N
ATOM 21 C2 A B 513 177.130 100.572 9.710 1.00 69.58 C
ATOM 22 N3 A B 513 177.189 100.228 10.993 1.00 69.89 N
ATOM 23 C4 A B 513 177.644 101.252 11.736 1.00 70.93 C
ATOM 24 P C B 514 176.977 96.578 16.553 1.00 76.51 P
ATOM 25 OP1 C B 514 175.674 96.035 16.050 1.00 75.51 O
ATOM 26 OP2 C B 514 177.023 97.246 17.874 1.00 77.27 O
ATOM 27 O5' C B 514 178.046 95.404 16.555 1.00 78.39 O
TER
Atoms:
OP1: (187.377,103.582,19.843)
OP2: (189.079,102.000,18.761)
C3': (184.337,103.946,18.142)
C1': (184.147,101.832,17.082)
C5': (186.618,104.315,16.972)
O4': (185.058,102.607,16.319)
C8: (185.734,99.984,17.841)
O2': (182.691,102.302,18.922)
C6: (184.618,97.037,16.270)
C5: (184.940,98.291,16.826)
C4: (184.136,99.361,16.477)
P: (188.278,103.240,18.708)
C4': (185.152,103.956,16.855)
C2': (184.009,102.490,18.454)
C2: (182.874,98.094,15.196)
N1: (183.559,96.974,15.444)
N3: (183.075,99.328,15.655)
N6: (185.297,95.916,16.512)
N7: (185.946,98.698,17.689)
N9: (184.655,100.455,17.137)
O5': (187.375,103.174,17.418)
O3': (183.515,105.087,18.512)
OP2: (189.079,102.000,18.761)
C3': (184.337,103.946,18.142)
C1': (184.147,101.832,17.082)
C5': (186.618,104.315,16.972)
O4': (185.058,102.607,16.319)
C8: (185.734,99.984,17.841)
O2': (182.691,102.302,18.922)
C6: (184.618,97.037,16.270)
C5: (184.940,98.291,16.826)
C4: (184.136,99.361,16.477)
P: (188.278,103.240,18.708)
C4': (185.152,103.956,16.855)
C2': (184.009,102.490,18.454)
C2: (182.874,98.094,15.196)
N1: (183.559,96.974,15.444)
N3: (183.075,99.328,15.655)
N6: (185.297,95.916,16.512)
N7: (185.946,98.698,17.689)
N9: (184.655,100.455,17.137)
O5': (187.375,103.174,17.418)
O3': (183.515,105.087,18.512)
OP1: (179.541,100.182,18.628)
OP2: (180.469,102.206,17.300)
C3': (178.039,98.881,15.899)
C1': (177.562,100.154,13.990)
C5': (176.974,100.700,17.359)
O4': (176.633,100.555,14.967)
C8: (178.312,102.528,13.387)
O2': (179.516,98.778,13.913)
C6: (177.893,102.741,9.908)
C5: (178.006,102.506,11.283)
C4: (177.644,101.252,11.736)
P: (179.374,101.554,18.059)
C4': (176.838,99.776,16.174)
C2': (178.749,99.603,14.756)
C2: (177.130,100.572,9.710)
N1: (177.445,101.734,9.131)
N3: (177.189,100.228,10.993)
N6: (178.204,103.897,9.334)
N7: (178.428,103.306,12.335)
N9: (177.840,101.274,13.097)
O5': (178.069,101.607,17.152)
O3': (177.545,97.624,15.469)
OP2: (180.469,102.206,17.300)
C3': (178.039,98.881,15.899)
C1': (177.562,100.154,13.990)
C5': (176.974,100.700,17.359)
O4': (176.633,100.555,14.967)
C8: (178.312,102.528,13.387)
O2': (179.516,98.778,13.913)
C6: (177.893,102.741,9.908)
C5: (178.006,102.506,11.283)
C4: (177.644,101.252,11.736)
P: (179.374,101.554,18.059)
C4': (176.838,99.776,16.174)
C2': (178.749,99.603,14.756)
C2: (177.130,100.572,9.710)
N1: (177.445,101.734,9.131)
N3: (177.189,100.228,10.993)
N6: (178.204,103.897,9.334)
N7: (178.428,103.306,12.335)
N9: (177.840,101.274,13.097)
O5': (178.069,101.607,17.152)
O3': (177.545,97.624,15.469)
Image (generated by PyMOL):