Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A450:A454
Extra
PDB:
ATOM 1 O3' C A 449 43.855 147.707 52.407 1.00 49.27 O
ATOM 2 P A A 450 44.248 148.871 51.395 1.00 54.94 P
ATOM 3 OP1 A A 450 43.541 150.101 51.831 1.00 54.05 O
ATOM 4 OP2 A A 450 44.038 148.338 50.022 1.00 54.72 O
ATOM 5 O5' A A 450 45.812 149.052 51.623 1.00 56.02 O
ATOM 6 C5' A A 450 46.620 149.814 50.715 1.00 58.38 C
ATOM 7 C4' A A 450 48.068 149.730 51.131 1.00 61.21 C
ATOM 8 O4' A A 450 48.282 150.482 52.356 1.00 63.12 O
ATOM 9 C3' A A 450 48.550 148.322 51.432 1.00 61.05 C
ATOM 10 O3' A A 450 48.995 147.673 50.244 1.00 60.21 O
ATOM 11 C2' A A 450 49.690 148.560 52.413 1.00 62.94 C
ATOM 12 O2' A A 450 50.909 148.862 51.769 1.00 61.87 O
ATOM 13 C1' A A 450 49.192 149.787 53.186 1.00 63.84 C
ATOM 14 N9 A A 450 48.506 149.488 54.440 1.00 65.10 N
ATOM 15 C8 A A 450 47.155 149.332 54.636 1.00 66.04 C
ATOM 16 N7 A A 450 46.817 149.143 55.887 1.00 67.14 N
ATOM 17 C5 A A 450 48.030 149.165 56.562 1.00 67.53 C
ATOM 18 C6 A A 450 48.354 149.057 57.925 1.00 68.24 C
ATOM 19 N6 A A 450 47.438 148.936 58.885 1.00 69.01 N
ATOM 20 N1 A A 450 49.664 149.098 58.270 1.00 67.39 N
ATOM 21 C2 A A 450 50.571 149.260 57.300 1.00 66.61 C
ATOM 22 N3 A A 450 50.389 149.400 55.987 1.00 66.24 N
ATOM 23 C4 A A 450 49.081 149.345 55.679 1.00 66.30 C
ATOM 24 P A A 451 48.781 146.094 50.066 1.00 60.98 P
ATOM 25 OP1 A A 451 49.139 145.768 48.664 1.00 60.61 O
ATOM 26 OP2 A A 451 47.408 145.796 50.569 1.00 60.73 O
ATOM 27 O5' A A 451 49.860 145.427 51.035 1.00 55.86 O
TER
ATOM 1 O3' U B 453 55.464 148.995 54.068 1.00 39.02 O
ATOM 2 P A B 454 56.669 149.346 55.060 1.00 38.53 P
ATOM 3 OP1 A B 454 57.003 150.742 54.765 1.00 38.80 O
ATOM 4 OP2 A B 454 57.729 148.299 54.978 1.00 37.45 O
ATOM 5 O5' A B 454 55.993 149.309 56.502 1.00 37.28 O
ATOM 6 C5' A B 454 55.060 150.335 56.856 1.00 37.49 C
ATOM 7 C4' A B 454 54.491 150.117 58.231 1.00 38.72 C
ATOM 8 O4' A B 454 53.678 148.925 58.261 1.00 39.98 O
ATOM 9 C3' A B 454 55.484 149.911 59.346 1.00 38.37 C
ATOM 10 O3' A B 454 55.960 151.173 59.785 1.00 40.31 O
ATOM 11 C2' A B 454 54.603 149.266 60.404 1.00 38.77 C
ATOM 12 O2' A B 454 53.768 150.261 60.972 1.00 37.24 O
ATOM 13 C1' A B 454 53.735 148.337 59.547 1.00 38.90 C
ATOM 14 N9 A B 454 54.242 146.965 59.396 1.00 38.64 N
ATOM 15 C8 A B 454 54.948 146.433 58.331 1.00 38.60 C
ATOM 16 N7 A B 454 55.347 145.193 58.521 1.00 36.36 N
ATOM 17 C5 A B 454 54.857 144.880 59.779 1.00 36.80 C
ATOM 18 C6 A B 454 54.968 143.734 60.569 1.00 36.68 C
ATOM 19 N6 A B 454 55.673 142.651 60.222 1.00 36.42 N
ATOM 20 N1 A B 454 54.341 143.739 61.761 1.00 36.99 N
ATOM 21 C2 A B 454 53.673 144.835 62.140 1.00 35.02 C
ATOM 22 N3 A B 454 53.518 145.984 61.506 1.00 35.00 N
ATOM 23 C4 A B 454 54.142 145.948 60.317 1.00 37.00 C
ATOM 24 P G B 455 57.526 151.389 60.027 1.00 41.56 P
ATOM 25 OP1 G B 455 57.691 152.764 60.593 1.00 42.59 O
ATOM 26 OP2 G B 455 58.211 151.043 58.757 1.00 41.64 O
ATOM 27 O5' G B 455 57.885 150.290 61.128 1.00 40.45 O
TER
ATOM 2 P A A 450 44.248 148.871 51.395 1.00 54.94 P
ATOM 3 OP1 A A 450 43.541 150.101 51.831 1.00 54.05 O
ATOM 4 OP2 A A 450 44.038 148.338 50.022 1.00 54.72 O
ATOM 5 O5' A A 450 45.812 149.052 51.623 1.00 56.02 O
ATOM 6 C5' A A 450 46.620 149.814 50.715 1.00 58.38 C
ATOM 7 C4' A A 450 48.068 149.730 51.131 1.00 61.21 C
ATOM 8 O4' A A 450 48.282 150.482 52.356 1.00 63.12 O
ATOM 9 C3' A A 450 48.550 148.322 51.432 1.00 61.05 C
ATOM 10 O3' A A 450 48.995 147.673 50.244 1.00 60.21 O
ATOM 11 C2' A A 450 49.690 148.560 52.413 1.00 62.94 C
ATOM 12 O2' A A 450 50.909 148.862 51.769 1.00 61.87 O
ATOM 13 C1' A A 450 49.192 149.787 53.186 1.00 63.84 C
ATOM 14 N9 A A 450 48.506 149.488 54.440 1.00 65.10 N
ATOM 15 C8 A A 450 47.155 149.332 54.636 1.00 66.04 C
ATOM 16 N7 A A 450 46.817 149.143 55.887 1.00 67.14 N
ATOM 17 C5 A A 450 48.030 149.165 56.562 1.00 67.53 C
ATOM 18 C6 A A 450 48.354 149.057 57.925 1.00 68.24 C
ATOM 19 N6 A A 450 47.438 148.936 58.885 1.00 69.01 N
ATOM 20 N1 A A 450 49.664 149.098 58.270 1.00 67.39 N
ATOM 21 C2 A A 450 50.571 149.260 57.300 1.00 66.61 C
ATOM 22 N3 A A 450 50.389 149.400 55.987 1.00 66.24 N
ATOM 23 C4 A A 450 49.081 149.345 55.679 1.00 66.30 C
ATOM 24 P A A 451 48.781 146.094 50.066 1.00 60.98 P
ATOM 25 OP1 A A 451 49.139 145.768 48.664 1.00 60.61 O
ATOM 26 OP2 A A 451 47.408 145.796 50.569 1.00 60.73 O
ATOM 27 O5' A A 451 49.860 145.427 51.035 1.00 55.86 O
TER
ATOM 1 O3' U B 453 55.464 148.995 54.068 1.00 39.02 O
ATOM 2 P A B 454 56.669 149.346 55.060 1.00 38.53 P
ATOM 3 OP1 A B 454 57.003 150.742 54.765 1.00 38.80 O
ATOM 4 OP2 A B 454 57.729 148.299 54.978 1.00 37.45 O
ATOM 5 O5' A B 454 55.993 149.309 56.502 1.00 37.28 O
ATOM 6 C5' A B 454 55.060 150.335 56.856 1.00 37.49 C
ATOM 7 C4' A B 454 54.491 150.117 58.231 1.00 38.72 C
ATOM 8 O4' A B 454 53.678 148.925 58.261 1.00 39.98 O
ATOM 9 C3' A B 454 55.484 149.911 59.346 1.00 38.37 C
ATOM 10 O3' A B 454 55.960 151.173 59.785 1.00 40.31 O
ATOM 11 C2' A B 454 54.603 149.266 60.404 1.00 38.77 C
ATOM 12 O2' A B 454 53.768 150.261 60.972 1.00 37.24 O
ATOM 13 C1' A B 454 53.735 148.337 59.547 1.00 38.90 C
ATOM 14 N9 A B 454 54.242 146.965 59.396 1.00 38.64 N
ATOM 15 C8 A B 454 54.948 146.433 58.331 1.00 38.60 C
ATOM 16 N7 A B 454 55.347 145.193 58.521 1.00 36.36 N
ATOM 17 C5 A B 454 54.857 144.880 59.779 1.00 36.80 C
ATOM 18 C6 A B 454 54.968 143.734 60.569 1.00 36.68 C
ATOM 19 N6 A B 454 55.673 142.651 60.222 1.00 36.42 N
ATOM 20 N1 A B 454 54.341 143.739 61.761 1.00 36.99 N
ATOM 21 C2 A B 454 53.673 144.835 62.140 1.00 35.02 C
ATOM 22 N3 A B 454 53.518 145.984 61.506 1.00 35.00 N
ATOM 23 C4 A B 454 54.142 145.948 60.317 1.00 37.00 C
ATOM 24 P G B 455 57.526 151.389 60.027 1.00 41.56 P
ATOM 25 OP1 G B 455 57.691 152.764 60.593 1.00 42.59 O
ATOM 26 OP2 G B 455 58.211 151.043 58.757 1.00 41.64 O
ATOM 27 O5' G B 455 57.885 150.290 61.128 1.00 40.45 O
TER
Atoms:
OP1: (43.541,150.101,51.831)
OP2: (44.038,148.338,50.022)
C3': (48.550,148.322,51.432)
C1': (49.192,149.787,53.186)
C5': (46.620,149.814,50.715)
O4': (48.282,150.482,52.356)
C8: (47.155,149.332,54.636)
O2': (50.909,148.862,51.769)
C6: (48.354,149.057,57.925)
C5: (48.030,149.165,56.562)
C4: (49.081,149.345,55.679)
P: (44.248,148.871,51.395)
C4': (48.068,149.730,51.131)
C2': (49.690,148.560,52.413)
C2: (50.571,149.260,57.300)
N1: (49.664,149.098,58.270)
N3: (50.389,149.400,55.987)
N6: (47.438,148.936,58.885)
N7: (46.817,149.143,55.887)
N9: (48.506,149.488,54.440)
O5': (45.812,149.052,51.623)
O3': (48.995,147.673,50.244)
OP2: (44.038,148.338,50.022)
C3': (48.550,148.322,51.432)
C1': (49.192,149.787,53.186)
C5': (46.620,149.814,50.715)
O4': (48.282,150.482,52.356)
C8: (47.155,149.332,54.636)
O2': (50.909,148.862,51.769)
C6: (48.354,149.057,57.925)
C5: (48.030,149.165,56.562)
C4: (49.081,149.345,55.679)
P: (44.248,148.871,51.395)
C4': (48.068,149.730,51.131)
C2': (49.690,148.560,52.413)
C2: (50.571,149.260,57.300)
N1: (49.664,149.098,58.270)
N3: (50.389,149.400,55.987)
N6: (47.438,148.936,58.885)
N7: (46.817,149.143,55.887)
N9: (48.506,149.488,54.440)
O5': (45.812,149.052,51.623)
O3': (48.995,147.673,50.244)
OP1: (57.003,150.742,54.765)
OP2: (57.729,148.299,54.978)
C3': (55.484,149.911,59.346)
C1': (53.735,148.337,59.547)
C5': (55.060,150.335,56.856)
O4': (53.678,148.925,58.261)
C8: (54.948,146.433,58.331)
O2': (53.768,150.261,60.972)
C6: (54.968,143.734,60.569)
C5: (54.857,144.880,59.779)
C4: (54.142,145.948,60.317)
P: (56.669,149.346,55.060)
C4': (54.491,150.117,58.231)
C2': (54.603,149.266,60.404)
C2: (53.673,144.835,62.140)
N1: (54.341,143.739,61.761)
N3: (53.518,145.984,61.506)
N6: (55.673,142.651,60.222)
N7: (55.347,145.193,58.521)
N9: (54.242,146.965,59.396)
O5': (55.993,149.309,56.502)
O3': (55.960,151.173,59.785)
OP2: (57.729,148.299,54.978)
C3': (55.484,149.911,59.346)
C1': (53.735,148.337,59.547)
C5': (55.060,150.335,56.856)
O4': (53.678,148.925,58.261)
C8: (54.948,146.433,58.331)
O2': (53.768,150.261,60.972)
C6: (54.968,143.734,60.569)
C5: (54.857,144.880,59.779)
C4: (54.142,145.948,60.317)
P: (56.669,149.346,55.060)
C4': (54.491,150.117,58.231)
C2': (54.603,149.266,60.404)
C2: (53.673,144.835,62.140)
N1: (54.341,143.739,61.761)
N3: (53.518,145.984,61.506)
N6: (55.673,142.651,60.222)
N7: (55.347,145.193,58.521)
N9: (54.242,146.965,59.396)
O5': (55.993,149.309,56.502)
O3': (55.960,151.173,59.785)
Image (generated by PyMOL):