ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1S72:01223:0553

Extra

PDB:
ATOM 1 O3' C A1222 7.568 88.467 97.617 1.00 35.84 O
ATOM 2 P U A1223 7.250 88.652 96.058 1.00 36.58 P
ATOM 3 OP1 U A1223 6.434 87.496 95.603 1.00 35.48 O
ATOM 4 OP2 U A1223 8.531 88.950 95.374 1.00 36.04 O
ATOM 5 O5' U A1223 6.371 89.977 96.021 1.00 33.52 O
ATOM 6 C5' U A1223 5.061 89.994 96.590 1.00 33.61 C
ATOM 7 C4' U A1223 4.491 91.389 96.560 1.00 34.83 C
ATOM 8 O4' U A1223 5.272 92.262 97.415 1.00 35.98 O
ATOM 9 C3' U A1223 4.506 92.104 95.224 1.00 34.51 C
ATOM 10 O3' U A1223 3.455 91.679 94.376 1.00 37.84 O
ATOM 11 C2' U A1223 4.339 93.549 95.656 1.00 35.87 C
ATOM 12 O2' U A1223 3.011 93.858 96.005 1.00 35.59 O
ATOM 13 C1' U A1223 5.221 93.587 96.907 1.00 35.27 C
ATOM 14 N1 U A1223 6.587 94.019 96.570 1.00 35.60 N
ATOM 15 C2 U A1223 6.840 95.382 96.536 1.00 35.97 C
ATOM 16 O2 U A1223 6.007 96.223 96.841 1.00 34.25 O
ATOM 17 N3 U A1223 8.109 95.724 96.134 1.00 36.40 N
ATOM 18 C4 U A1223 9.129 94.863 95.786 1.00 35.37 C
ATOM 19 O4 U A1223 10.197 95.323 95.390 1.00 35.90 O
ATOM 20 C5 U A1223 8.800 93.475 95.886 1.00 33.78 C
ATOM 21 C6 U A1223 7.577 93.109 96.266 1.00 33.43 C
ATOM 22 P G A1224 3.559 91.915 92.789 1.00 39.48 P
ATOM 23 OP1 G A1224 2.630 90.933 92.167 1.00 39.68 O
ATOM 24 OP2 G A1224 4.984 91.926 92.381 1.00 41.23 O
ATOM 25 O5' G A1224 2.972 93.380 92.579 1.00 36.68 O
TER

ATOM 1 O3' G B 552 -5.774 94.246 96.659 1.00 48.37 O
ATOM 2 P A B 553 -5.320 93.251 97.839 1.00 50.62 P
ATOM 3 OP1 A B 553 -5.955 91.932 97.575 1.00 46.45 O
ATOM 4 OP2 A B 553 -5.498 93.905 99.164 1.00 44.95 O
ATOM 5 O5' A B 553 -3.761 93.066 97.561 1.00 48.94 O
ATOM 6 C5' A B 553 -3.307 92.391 96.367 1.00 45.36 C
ATOM 7 C4' A B 553 -1.804 92.457 96.254 1.00 43.54 C
ATOM 8 O4' A B 553 -1.382 93.776 95.828 1.00 43.82 O
ATOM 9 C3' A B 553 -1.026 92.209 97.531 1.00 41.65 C
ATOM 10 O3' A B 553 -0.916 90.814 97.777 1.00 43.12 O
ATOM 11 C2' A B 553 0.316 92.854 97.211 1.00 40.32 C
ATOM 12 O2' A B 553 1.107 92.030 96.376 1.00 40.61 O
ATOM 13 C1' A B 553 -0.120 94.076 96.398 1.00 39.45 C
ATOM 14 N9 A B 553 -0.247 95.318 97.157 1.00 38.49 N
ATOM 15 C8 A B 553 -1.397 95.896 97.634 1.00 38.98 C
ATOM 16 N7 A B 553 -1.199 97.035 98.252 1.00 39.53 N
ATOM 17 C5 A B 553 0.173 97.220 98.184 1.00 38.40 C
ATOM 18 C6 A B 553 1.018 98.249 98.653 1.00 39.45 C
ATOM 19 N6 A B 553 0.587 99.331 99.309 1.00 38.52 N
ATOM 20 N1 A B 553 2.340 98.125 98.421 1.00 40.13 N
ATOM 21 C2 A B 553 2.778 97.039 97.765 1.00 39.93 C
ATOM 22 N3 A B 553 2.088 96.012 97.277 1.00 40.26 N
ATOM 23 C4 A B 553 0.774 96.164 97.521 1.00 39.41 C
ATOM 24 P A B 554 -1.003 90.255 99.283 1.00 43.21 P
ATOM 25 OP1 A B 554 -1.116 88.769 99.186 1.00 41.90 O
ATOM 26 OP2 A B 554 -2.035 91.031 100.007 1.00 42.86 O
ATOM 27 O5' A B 554 0.405 90.618 99.937 1.00 43.44 O
TER

Atoms:
C4: (9.129,94.863,95.786)
N3: (8.109,95.724,96.134)
OP1: (6.434,87.496,95.603)
OP2: (8.531,88.950,95.374)
C2: (6.840,95.382,96.536)
C1': (5.221,93.587,96.907)
C3': (4.506,92.104,95.224)
O5': (6.371,89.977,96.021)
O4': (5.272,92.262,97.415)
C5': (5.061,89.994,96.590)
P: (7.250,88.652,96.058)
C4': (4.491,91.389,96.560)
C2': (4.339,93.549,95.656)
O2': (3.011,93.858,96.005)
N1: (6.587,94.019,96.570)
O4: (10.197,95.323,95.390)
O2: (6.007,96.223,96.841)
C6: (7.577,93.109,96.266)
C5: (8.800,93.475,95.886)
O3': (3.455,91.679,94.376)
OP1: (-5.955,91.932,97.575)
OP2: (-5.498,93.905,99.164)
C3': (-1.026,92.209,97.531)
C1': (-0.120,94.076,96.398)
C5': (-3.307,92.391,96.367)
O4': (-1.382,93.776,95.828)
C8: (-1.397,95.896,97.634)
O2': (1.107,92.030,96.376)
C6: (1.018,98.249,98.653)
C5: (0.173,97.220,98.184)
C4: (0.774,96.164,97.521)
P: (-5.320,93.251,97.839)
C4': (-1.804,92.457,96.254)
C2': (0.316,92.854,97.211)
C2: (2.778,97.039,97.765)
N1: (2.340,98.125,98.421)
N3: (2.088,96.012,97.277)
N6: (0.587,99.331,99.309)
N7: (-1.199,97.035,98.252)
N9: (-0.247,95.318,97.157)
O5': (-3.761,93.066,97.561)
O3': (-0.916,90.814,97.777)
Image (generated by PyMOL):
PyMOL image
show in jmol