Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0469:0499
Extra
PDB:
ATOM 1 O3' C A 468 29.612 147.389 54.640 1.00 51.99 O
ATOM 2 P U A 469 29.482 148.959 54.296 1.00 52.18 P
ATOM 3 OP1 U A 469 29.355 149.045 52.823 1.00 51.17 O
ATOM 4 OP2 U A 469 30.551 149.725 54.987 1.00 52.14 O
ATOM 5 O5' U A 469 28.096 149.395 54.943 1.00 49.24 O
ATOM 6 C5' U A 469 27.917 149.383 56.361 1.00 49.39 C
ATOM 7 C4' U A 469 26.908 150.429 56.769 1.00 51.94 C
ATOM 8 O4' U A 469 27.447 151.757 56.540 1.00 53.40 O
ATOM 9 C3' U A 469 25.610 150.423 55.984 1.00 52.13 C
ATOM 10 O3' U A 469 24.712 149.421 56.437 1.00 51.30 O
ATOM 11 C2' U A 469 25.098 151.838 56.201 1.00 52.91 C
ATOM 12 O2' U A 469 24.517 152.017 57.477 1.00 52.60 O
ATOM 13 C1' U A 469 26.403 152.634 56.142 1.00 52.85 C
ATOM 14 N1 U A 469 26.735 153.197 54.820 1.00 53.56 N
ATOM 15 C2 U A 469 25.972 154.258 54.351 1.00 54.43 C
ATOM 16 O2 U A 469 25.011 154.699 54.947 1.00 55.37 O
ATOM 17 N3 U A 469 26.381 154.786 53.154 1.00 54.06 N
ATOM 18 C4 U A 469 27.450 154.375 52.388 1.00 55.90 C
ATOM 19 O4 U A 469 27.799 155.061 51.422 1.00 57.41 O
ATOM 20 C5 U A 469 28.159 153.249 52.915 1.00 55.26 C
ATOM 21 C6 U A 469 27.785 152.712 54.079 1.00 53.69 C
ATOM 22 P G A 470 24.043 148.427 55.368 1.00 53.66 P
ATOM 23 OP1 G A 470 23.188 147.466 56.112 1.00 52.76 O
ATOM 24 OP2 G A 470 25.089 147.913 54.438 1.00 51.60 O
ATOM 25 O5' G A 470 23.106 149.394 54.529 1.00 53.15 O
TER
ATOM 1 O3' U B 498 20.171 150.119 65.721 1.00 85.05 O
ATOM 2 P A B 499 19.264 149.626 64.490 1.00 83.89 P
ATOM 3 OP1 A B 499 18.058 150.489 64.404 1.00 84.01 O
ATOM 4 OP2 A B 499 19.101 148.151 64.669 1.00 84.94 O
ATOM 5 O5' A B 499 20.170 149.915 63.207 1.00 78.34 O
ATOM 6 C5' A B 499 20.921 151.142 63.093 1.00 70.65 C
ATOM 7 C4' A B 499 21.915 151.057 61.954 1.00 65.92 C
ATOM 8 O4' A B 499 21.216 150.769 60.713 1.00 65.41 O
ATOM 9 C3' A B 499 22.660 152.352 61.672 1.00 62.89 C
ATOM 10 O3' A B 499 23.787 152.499 62.528 1.00 59.99 O
ATOM 11 C2' A B 499 23.052 152.183 60.214 1.00 62.59 C
ATOM 12 O2' A B 499 24.147 151.322 60.058 1.00 63.25 O
ATOM 13 C1' A B 499 21.812 151.492 59.646 1.00 64.26 C
ATOM 14 N9 A B 499 20.836 152.461 59.141 1.00 65.60 N
ATOM 15 C8 A B 499 19.662 152.871 59.728 1.00 65.87 C
ATOM 16 N7 A B 499 19.039 153.812 59.066 1.00 65.29 N
ATOM 17 C5 A B 499 19.844 154.027 57.960 1.00 65.70 C
ATOM 18 C6 A B 499 19.745 154.916 56.887 1.00 66.22 C
ATOM 19 N6 A B 499 18.756 155.794 56.746 1.00 65.79 N
ATOM 20 N1 A B 499 20.715 154.880 55.952 1.00 67.22 N
ATOM 21 C2 A B 499 21.713 154.002 56.098 1.00 67.05 C
ATOM 22 N3 A B 499 21.920 153.118 57.066 1.00 66.00 N
ATOM 23 C4 A B 499 20.941 153.185 57.980 1.00 65.53 C
ATOM 24 P G B 500 23.909 153.790 63.480 1.00 57.53 P
ATOM 25 OP1 G B 500 25.045 153.534 64.396 1.00 57.09 O
ATOM 26 OP2 G B 500 22.576 154.129 64.051 1.00 55.36 O
ATOM 27 O5' G B 500 24.336 154.945 62.479 1.00 55.74 O
TER
ATOM 2 P U A 469 29.482 148.959 54.296 1.00 52.18 P
ATOM 3 OP1 U A 469 29.355 149.045 52.823 1.00 51.17 O
ATOM 4 OP2 U A 469 30.551 149.725 54.987 1.00 52.14 O
ATOM 5 O5' U A 469 28.096 149.395 54.943 1.00 49.24 O
ATOM 6 C5' U A 469 27.917 149.383 56.361 1.00 49.39 C
ATOM 7 C4' U A 469 26.908 150.429 56.769 1.00 51.94 C
ATOM 8 O4' U A 469 27.447 151.757 56.540 1.00 53.40 O
ATOM 9 C3' U A 469 25.610 150.423 55.984 1.00 52.13 C
ATOM 10 O3' U A 469 24.712 149.421 56.437 1.00 51.30 O
ATOM 11 C2' U A 469 25.098 151.838 56.201 1.00 52.91 C
ATOM 12 O2' U A 469 24.517 152.017 57.477 1.00 52.60 O
ATOM 13 C1' U A 469 26.403 152.634 56.142 1.00 52.85 C
ATOM 14 N1 U A 469 26.735 153.197 54.820 1.00 53.56 N
ATOM 15 C2 U A 469 25.972 154.258 54.351 1.00 54.43 C
ATOM 16 O2 U A 469 25.011 154.699 54.947 1.00 55.37 O
ATOM 17 N3 U A 469 26.381 154.786 53.154 1.00 54.06 N
ATOM 18 C4 U A 469 27.450 154.375 52.388 1.00 55.90 C
ATOM 19 O4 U A 469 27.799 155.061 51.422 1.00 57.41 O
ATOM 20 C5 U A 469 28.159 153.249 52.915 1.00 55.26 C
ATOM 21 C6 U A 469 27.785 152.712 54.079 1.00 53.69 C
ATOM 22 P G A 470 24.043 148.427 55.368 1.00 53.66 P
ATOM 23 OP1 G A 470 23.188 147.466 56.112 1.00 52.76 O
ATOM 24 OP2 G A 470 25.089 147.913 54.438 1.00 51.60 O
ATOM 25 O5' G A 470 23.106 149.394 54.529 1.00 53.15 O
TER
ATOM 1 O3' U B 498 20.171 150.119 65.721 1.00 85.05 O
ATOM 2 P A B 499 19.264 149.626 64.490 1.00 83.89 P
ATOM 3 OP1 A B 499 18.058 150.489 64.404 1.00 84.01 O
ATOM 4 OP2 A B 499 19.101 148.151 64.669 1.00 84.94 O
ATOM 5 O5' A B 499 20.170 149.915 63.207 1.00 78.34 O
ATOM 6 C5' A B 499 20.921 151.142 63.093 1.00 70.65 C
ATOM 7 C4' A B 499 21.915 151.057 61.954 1.00 65.92 C
ATOM 8 O4' A B 499 21.216 150.769 60.713 1.00 65.41 O
ATOM 9 C3' A B 499 22.660 152.352 61.672 1.00 62.89 C
ATOM 10 O3' A B 499 23.787 152.499 62.528 1.00 59.99 O
ATOM 11 C2' A B 499 23.052 152.183 60.214 1.00 62.59 C
ATOM 12 O2' A B 499 24.147 151.322 60.058 1.00 63.25 O
ATOM 13 C1' A B 499 21.812 151.492 59.646 1.00 64.26 C
ATOM 14 N9 A B 499 20.836 152.461 59.141 1.00 65.60 N
ATOM 15 C8 A B 499 19.662 152.871 59.728 1.00 65.87 C
ATOM 16 N7 A B 499 19.039 153.812 59.066 1.00 65.29 N
ATOM 17 C5 A B 499 19.844 154.027 57.960 1.00 65.70 C
ATOM 18 C6 A B 499 19.745 154.916 56.887 1.00 66.22 C
ATOM 19 N6 A B 499 18.756 155.794 56.746 1.00 65.79 N
ATOM 20 N1 A B 499 20.715 154.880 55.952 1.00 67.22 N
ATOM 21 C2 A B 499 21.713 154.002 56.098 1.00 67.05 C
ATOM 22 N3 A B 499 21.920 153.118 57.066 1.00 66.00 N
ATOM 23 C4 A B 499 20.941 153.185 57.980 1.00 65.53 C
ATOM 24 P G B 500 23.909 153.790 63.480 1.00 57.53 P
ATOM 25 OP1 G B 500 25.045 153.534 64.396 1.00 57.09 O
ATOM 26 OP2 G B 500 22.576 154.129 64.051 1.00 55.36 O
ATOM 27 O5' G B 500 24.336 154.945 62.479 1.00 55.74 O
TER
Atoms:
C4: (27.450,154.375,52.388)
N3: (26.381,154.786,53.154)
OP1: (29.355,149.045,52.823)
OP2: (30.551,149.725,54.987)
C2: (25.972,154.258,54.351)
C1': (26.403,152.634,56.142)
C3': (25.610,150.423,55.984)
O5': (28.096,149.395,54.943)
O4': (27.447,151.757,56.540)
C5': (27.917,149.383,56.361)
P: (29.482,148.959,54.296)
C4': (26.908,150.429,56.769)
C2': (25.098,151.838,56.201)
O2': (24.517,152.017,57.477)
N1: (26.735,153.197,54.820)
O4: (27.799,155.061,51.422)
O2: (25.011,154.699,54.947)
C6: (27.785,152.712,54.079)
C5: (28.159,153.249,52.915)
O3': (24.712,149.421,56.437)
N3: (26.381,154.786,53.154)
OP1: (29.355,149.045,52.823)
OP2: (30.551,149.725,54.987)
C2: (25.972,154.258,54.351)
C1': (26.403,152.634,56.142)
C3': (25.610,150.423,55.984)
O5': (28.096,149.395,54.943)
O4': (27.447,151.757,56.540)
C5': (27.917,149.383,56.361)
P: (29.482,148.959,54.296)
C4': (26.908,150.429,56.769)
C2': (25.098,151.838,56.201)
O2': (24.517,152.017,57.477)
N1: (26.735,153.197,54.820)
O4: (27.799,155.061,51.422)
O2: (25.011,154.699,54.947)
C6: (27.785,152.712,54.079)
C5: (28.159,153.249,52.915)
O3': (24.712,149.421,56.437)
OP1: (18.058,150.489,64.404)
OP2: (19.101,148.151,64.669)
C3': (22.660,152.352,61.672)
C1': (21.812,151.492,59.646)
C5': (20.921,151.142,63.093)
O4': (21.216,150.769,60.713)
C8: (19.662,152.871,59.728)
O2': (24.147,151.322,60.058)
C6: (19.745,154.916,56.887)
C5: (19.844,154.027,57.960)
C4: (20.941,153.185,57.980)
P: (19.264,149.626,64.490)
C4': (21.915,151.057,61.954)
C2': (23.052,152.183,60.214)
C2: (21.713,154.002,56.098)
N1: (20.715,154.880,55.952)
N3: (21.920,153.118,57.066)
N6: (18.756,155.794,56.746)
N7: (19.039,153.812,59.066)
N9: (20.836,152.461,59.141)
O5': (20.170,149.915,63.207)
O3': (23.787,152.499,62.528)
OP2: (19.101,148.151,64.669)
C3': (22.660,152.352,61.672)
C1': (21.812,151.492,59.646)
C5': (20.921,151.142,63.093)
O4': (21.216,150.769,60.713)
C8: (19.662,152.871,59.728)
O2': (24.147,151.322,60.058)
C6: (19.745,154.916,56.887)
C5: (19.844,154.027,57.960)
C4: (20.941,153.185,57.980)
P: (19.264,149.626,64.490)
C4': (21.915,151.057,61.954)
C2': (23.052,152.183,60.214)
C2: (21.713,154.002,56.098)
N1: (20.715,154.880,55.952)
N3: (21.920,153.118,57.066)
N6: (18.756,155.794,56.746)
N7: (19.039,153.812,59.066)
N9: (20.836,152.461,59.141)
O5': (20.170,149.915,63.207)
O3': (23.787,152.499,62.528)
Image (generated by PyMOL):