ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:13122:13087

Extra

PDB:
ATOM 1 O3' G A3121 12.273 83.542 70.522 1.00 69.24 O
ATOM 2 P A A3122 12.809 85.064 70.433 1.00 65.17 P
ATOM 3 OP1 A A3122 11.657 85.954 70.129 1.00 65.89 O
ATOM 4 OP2 A A3122 13.971 85.074 69.511 1.00 64.95 O
ATOM 5 O5' A A3122 13.307 85.320 71.924 1.00 65.31 O
ATOM 6 C5' A A3122 14.253 84.446 72.524 1.00 64.67 C
ATOM 7 C4' A A3122 13.871 84.091 73.943 1.00 64.60 C
ATOM 8 O4' A A3122 12.737 83.177 73.953 1.00 64.24 O
ATOM 9 C3' A A3122 14.942 83.366 74.748 1.00 64.06 C
ATOM 10 O3' A A3122 15.910 84.245 75.277 1.00 64.48 O
ATOM 11 C2' A A3122 14.139 82.606 75.812 1.00 63.81 C
ATOM 12 O2' A A3122 13.820 83.447 76.916 1.00 64.45 O
ATOM 13 C1' A A3122 12.846 82.292 75.056 1.00 63.78 C
ATOM 14 N9 A A3122 12.762 80.887 74.575 1.00 62.95 N
ATOM 15 C8 A A3122 12.370 80.484 73.324 1.00 62.70 C
ATOM 16 N7 A A3122 12.267 79.197 73.149 1.00 61.97 N
ATOM 17 C5 A A3122 12.602 78.697 74.392 1.00 61.71 C
ATOM 18 C6 A A3122 12.709 77.384 74.860 1.00 60.99 C
ATOM 19 N6 A A3122 12.473 76.329 74.097 1.00 60.40 N
ATOM 20 N1 A A3122 13.048 77.186 76.143 1.00 60.92 N
ATOM 21 C2 A A3122 13.291 78.261 76.894 1.00 61.54 C
ATOM 22 N3 A A3122 13.245 79.547 76.576 1.00 62.25 N
ATOM 23 C4 A A3122 12.890 79.712 75.288 1.00 62.30 C
ATOM 24 P G A3123 17.413 84.116 74.802 1.00 68.25 P
ATOM 25 OP1 G A3123 18.125 85.348 75.197 1.00 68.92 O
ATOM 26 OP2 G A3123 17.369 83.759 73.382 1.00 67.95 O
ATOM 27 O5' G A3123 17.923 82.879 75.671 1.00 67.52 O
TER

ATOM 1 O3' U B3086 10.190 79.814 79.050 1.00 69.94 O
ATOM 2 P A B3087 10.246 80.070 80.642 1.00 73.66 P
ATOM 3 OP1 A B3087 8.995 79.533 81.206 1.00 73.63 O
ATOM 4 OP2 A B3087 10.561 81.506 80.848 1.00 74.46 O
ATOM 5 O5' A B3087 11.465 79.169 81.122 1.00 73.00 O
ATOM 6 C5' A B3087 12.518 78.848 80.251 1.00 72.55 C
ATOM 7 C4' A B3087 13.769 78.500 81.005 1.00 72.24 C
ATOM 8 O4' A B3087 14.915 78.906 80.212 1.00 72.22 O
ATOM 9 C3' A B3087 13.942 79.184 82.361 1.00 72.76 C
ATOM 10 O3' A B3087 13.449 78.375 83.432 1.00 72.50 O
ATOM 11 C2' A B3087 15.444 79.457 82.434 1.00 72.70 C
ATOM 12 O2' A B3087 16.128 78.289 82.869 1.00 71.99 O
ATOM 13 C1' A B3087 15.797 79.684 80.965 1.00 72.61 C
ATOM 14 N9 A B3087 15.616 81.080 80.521 1.00 73.39 N
ATOM 15 C8 A B3087 14.594 81.410 79.659 1.00 73.64 C
ATOM 16 N7 A B3087 14.533 82.665 79.305 1.00 74.35 N
ATOM 17 C5 A B3087 15.610 83.225 79.970 1.00 74.59 C
ATOM 18 C6 A B3087 16.059 84.549 79.999 1.00 75.32 C
ATOM 19 N6 A B3087 15.472 85.547 79.330 1.00 75.93 N
ATOM 20 N1 A B3087 17.146 84.803 80.737 1.00 75.39 N
ATOM 21 C2 A B3087 17.717 83.788 81.389 1.00 74.78 C
ATOM 22 N3 A B3087 17.388 82.496 81.450 1.00 74.07 N
ATOM 23 C4 A B3087 16.306 82.261 80.702 1.00 74.00 C
ATOM 24 P A B3088 13.075 79.010 84.874 1.00 70.65 P
ATOM 25 OP1 A B3088 12.731 77.874 85.783 1.00 70.18 O
ATOM 26 OP2 A B3088 12.056 80.085 84.648 1.00 71.39 O
ATOM 27 O5' A B3088 14.442 79.667 85.323 1.00 70.88 O
TER

Atoms:
OP1: (11.657,85.954,70.129)
OP2: (13.971,85.074,69.511)
C3': (14.942,83.366,74.748)
C1': (12.846,82.292,75.056)
C5': (14.253,84.446,72.524)
O4': (12.737,83.177,73.953)
C8: (12.370,80.484,73.324)
O2': (13.820,83.447,76.916)
C6: (12.709,77.384,74.860)
C5: (12.602,78.697,74.392)
C4: (12.890,79.712,75.288)
P: (12.809,85.064,70.433)
C4': (13.871,84.091,73.943)
C2': (14.139,82.606,75.812)
C2: (13.291,78.261,76.894)
N1: (13.048,77.186,76.143)
N3: (13.245,79.547,76.576)
N6: (12.473,76.329,74.097)
N7: (12.267,79.197,73.149)
N9: (12.762,80.887,74.575)
O5': (13.307,85.320,71.924)
O3': (15.910,84.245,75.277)
OP1: (8.995,79.533,81.206)
OP2: (10.561,81.506,80.848)
C3': (13.942,79.184,82.361)
C1': (15.797,79.684,80.965)
C5': (12.518,78.848,80.251)
O4': (14.915,78.906,80.212)
C8: (14.594,81.410,79.659)
O2': (16.128,78.289,82.869)
C6: (16.059,84.549,79.999)
C5: (15.610,83.225,79.970)
C4: (16.306,82.261,80.702)
P: (10.246,80.070,80.642)
C4': (13.769,78.500,81.005)
C2': (15.444,79.457,82.434)
C2: (17.717,83.788,81.389)
N1: (17.146,84.803,80.737)
N3: (17.388,82.496,81.450)
N6: (15.472,85.547,79.330)
N7: (14.533,82.665,79.305)
N9: (15.616,81.080,80.521)
O5': (11.465,79.169,81.122)
O3': (13.449,78.375,83.432)
Image (generated by PyMOL):
PyMOL image
show in jmol