Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11950:12710
Extra
PDB:
ATOM 1 O3' A A1949 8.639 17.827 87.044 1.00 43.61 O
ATOM 2 P A A1950 7.634 18.368 85.904 1.00 37.55 P
ATOM 3 OP1 A A1950 8.438 19.001 84.812 1.00 37.42 O
ATOM 4 OP2 A A1950 6.626 19.174 86.614 1.00 37.94 O
ATOM 5 O5' A A1950 6.975 17.047 85.376 1.00 37.34 O
ATOM 6 C5' A A1950 6.388 16.171 86.289 1.00 37.38 C
ATOM 7 C4' A A1950 5.861 14.946 85.629 1.00 37.18 C
ATOM 8 O4' A A1950 6.948 14.084 85.245 1.00 36.83 O
ATOM 9 C3' A A1950 5.012 14.081 86.507 1.00 37.27 C
ATOM 10 O3' A A1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 11 C2' A A1950 5.121 12.739 85.808 1.00 36.97 C
ATOM 12 O2' A A1950 4.386 12.751 84.589 1.00 36.96 O
ATOM 13 C1' A A1950 6.599 12.748 85.448 1.00 36.69 C
ATOM 14 N9 A A1950 7.443 12.210 86.529 1.00 36.60 N
ATOM 15 C8 A A1950 7.741 12.799 87.718 1.00 36.78 C
ATOM 16 N7 A A1950 8.495 12.088 88.510 1.00 36.66 N
ATOM 17 C5 A A1950 8.716 10.922 87.785 1.00 36.37 C
ATOM 18 C6 A A1950 9.475 9.755 88.066 1.00 36.13 C
ATOM 19 N6 A A1950 10.166 9.515 89.165 1.00 36.14 N
ATOM 20 N1 A A1950 9.508 8.815 87.141 1.00 35.89 N
ATOM 21 C2 A A1950 8.817 9.053 86.009 1.00 35.89 C
ATOM 22 N3 A A1950 8.101 10.099 85.611 1.00 36.09 N
ATOM 23 C4 A A1950 8.081 11.013 86.560 1.00 36.33 C
ATOM 24 P A A1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 25 OP1 A A1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 26 OP2 A A1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 27 O5' A A1951 2.228 12.683 87.101 1.00 40.74 O
TER
ATOM 1 O3' G B2709 11.910 4.100 86.711 1.00 38.19 O
ATOM 2 P A B2710 10.930 2.878 86.382 1.00 38.55 P
ATOM 3 OP1 A B2710 10.610 2.223 87.638 1.00 38.68 O
ATOM 4 OP2 A B2710 11.555 2.092 85.309 1.00 38.28 O
ATOM 5 O5' A B2710 9.657 3.589 85.819 1.00 38.73 O
ATOM 6 C5' A B2710 8.809 4.339 86.651 1.00 39.01 C
ATOM 7 C4' A B2710 7.761 5.022 85.832 1.00 39.15 C
ATOM 8 O4' A B2710 8.398 5.807 84.782 1.00 39.03 O
ATOM 9 C3' A B2710 6.828 4.108 85.065 1.00 39.11 C
ATOM 10 O3' A B2710 5.828 3.548 85.874 1.00 39.30 O
ATOM 11 C2' A B2710 6.295 5.045 83.996 1.00 39.19 C
ATOM 12 O2' A B2710 5.337 5.945 84.529 1.00 39.49 O
ATOM 13 C1' A B2710 7.558 5.838 83.654 1.00 39.05 C
ATOM 14 N9 A B2710 8.233 5.232 82.512 1.00 38.78 N
ATOM 15 C8 A B2710 9.247 4.377 82.407 1.00 38.53 C
ATOM 16 N7 A B2710 9.426 4.039 81.164 1.00 38.37 N
ATOM 17 C5 A B2710 8.438 4.661 80.426 1.00 38.52 C
ATOM 18 C6 A B2710 8.054 4.693 79.081 1.00 38.49 C
ATOM 19 N6 A B2710 8.653 4.044 78.148 1.00 38.27 N
ATOM 20 N1 A B2710 7.034 5.435 78.660 1.00 38.69 N
ATOM 21 C2 A B2710 6.369 6.091 79.597 1.00 38.93 C
ATOM 22 N3 A B2710 6.580 6.142 80.910 1.00 39.00 N
ATOM 23 C4 A B2710 7.671 5.396 81.266 1.00 38.77 C
ATOM 24 P C B2711 5.176 2.128 85.516 1.00 39.88 P
ATOM 25 OP1 C B2711 4.775 1.532 86.785 1.00 40.03 O
ATOM 26 OP2 C B2711 6.104 1.397 84.697 1.00 39.59 O
ATOM 27 O5' C B2711 3.892 2.523 84.634 1.00 40.04 O
TER
ATOM 2 P A A1950 7.634 18.368 85.904 1.00 37.55 P
ATOM 3 OP1 A A1950 8.438 19.001 84.812 1.00 37.42 O
ATOM 4 OP2 A A1950 6.626 19.174 86.614 1.00 37.94 O
ATOM 5 O5' A A1950 6.975 17.047 85.376 1.00 37.34 O
ATOM 6 C5' A A1950 6.388 16.171 86.289 1.00 37.38 C
ATOM 7 C4' A A1950 5.861 14.946 85.629 1.00 37.18 C
ATOM 8 O4' A A1950 6.948 14.084 85.245 1.00 36.83 O
ATOM 9 C3' A A1950 5.012 14.081 86.507 1.00 37.27 C
ATOM 10 O3' A A1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 11 C2' A A1950 5.121 12.739 85.808 1.00 36.97 C
ATOM 12 O2' A A1950 4.386 12.751 84.589 1.00 36.96 O
ATOM 13 C1' A A1950 6.599 12.748 85.448 1.00 36.69 C
ATOM 14 N9 A A1950 7.443 12.210 86.529 1.00 36.60 N
ATOM 15 C8 A A1950 7.741 12.799 87.718 1.00 36.78 C
ATOM 16 N7 A A1950 8.495 12.088 88.510 1.00 36.66 N
ATOM 17 C5 A A1950 8.716 10.922 87.785 1.00 36.37 C
ATOM 18 C6 A A1950 9.475 9.755 88.066 1.00 36.13 C
ATOM 19 N6 A A1950 10.166 9.515 89.165 1.00 36.14 N
ATOM 20 N1 A A1950 9.508 8.815 87.141 1.00 35.89 N
ATOM 21 C2 A A1950 8.817 9.053 86.009 1.00 35.89 C
ATOM 22 N3 A A1950 8.101 10.099 85.611 1.00 36.09 N
ATOM 23 C4 A A1950 8.081 11.013 86.560 1.00 36.33 C
ATOM 24 P A A1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 25 OP1 A A1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 26 OP2 A A1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 27 O5' A A1951 2.228 12.683 87.101 1.00 40.74 O
TER
ATOM 1 O3' G B2709 11.910 4.100 86.711 1.00 38.19 O
ATOM 2 P A B2710 10.930 2.878 86.382 1.00 38.55 P
ATOM 3 OP1 A B2710 10.610 2.223 87.638 1.00 38.68 O
ATOM 4 OP2 A B2710 11.555 2.092 85.309 1.00 38.28 O
ATOM 5 O5' A B2710 9.657 3.589 85.819 1.00 38.73 O
ATOM 6 C5' A B2710 8.809 4.339 86.651 1.00 39.01 C
ATOM 7 C4' A B2710 7.761 5.022 85.832 1.00 39.15 C
ATOM 8 O4' A B2710 8.398 5.807 84.782 1.00 39.03 O
ATOM 9 C3' A B2710 6.828 4.108 85.065 1.00 39.11 C
ATOM 10 O3' A B2710 5.828 3.548 85.874 1.00 39.30 O
ATOM 11 C2' A B2710 6.295 5.045 83.996 1.00 39.19 C
ATOM 12 O2' A B2710 5.337 5.945 84.529 1.00 39.49 O
ATOM 13 C1' A B2710 7.558 5.838 83.654 1.00 39.05 C
ATOM 14 N9 A B2710 8.233 5.232 82.512 1.00 38.78 N
ATOM 15 C8 A B2710 9.247 4.377 82.407 1.00 38.53 C
ATOM 16 N7 A B2710 9.426 4.039 81.164 1.00 38.37 N
ATOM 17 C5 A B2710 8.438 4.661 80.426 1.00 38.52 C
ATOM 18 C6 A B2710 8.054 4.693 79.081 1.00 38.49 C
ATOM 19 N6 A B2710 8.653 4.044 78.148 1.00 38.27 N
ATOM 20 N1 A B2710 7.034 5.435 78.660 1.00 38.69 N
ATOM 21 C2 A B2710 6.369 6.091 79.597 1.00 38.93 C
ATOM 22 N3 A B2710 6.580 6.142 80.910 1.00 39.00 N
ATOM 23 C4 A B2710 7.671 5.396 81.266 1.00 38.77 C
ATOM 24 P C B2711 5.176 2.128 85.516 1.00 39.88 P
ATOM 25 OP1 C B2711 4.775 1.532 86.785 1.00 40.03 O
ATOM 26 OP2 C B2711 6.104 1.397 84.697 1.00 39.59 O
ATOM 27 O5' C B2711 3.892 2.523 84.634 1.00 40.04 O
TER
Atoms:
OP1: (8.438,19.001,84.812)
OP2: (6.626,19.174,86.614)
C3': (5.012,14.081,86.507)
C1': (6.599,12.748,85.448)
C5': (6.388,16.171,86.289)
O4': (6.948,14.084,85.245)
C8: (7.741,12.799,87.718)
O2': (4.386,12.751,84.589)
C6: (9.475,9.755,88.066)
C5: (8.716,10.922,87.785)
C4: (8.081,11.013,86.560)
P: (7.634,18.368,85.904)
C4': (5.861,14.946,85.629)
C2': (5.121,12.739,85.808)
C2: (8.817,9.053,86.009)
N1: (9.508,8.815,87.141)
N3: (8.101,10.099,85.611)
N6: (10.166,9.515,89.165)
N7: (8.495,12.088,88.510)
N9: (7.443,12.210,86.529)
O5': (6.975,17.047,85.376)
O3': (3.704,14.594,86.609)
OP2: (6.626,19.174,86.614)
C3': (5.012,14.081,86.507)
C1': (6.599,12.748,85.448)
C5': (6.388,16.171,86.289)
O4': (6.948,14.084,85.245)
C8: (7.741,12.799,87.718)
O2': (4.386,12.751,84.589)
C6: (9.475,9.755,88.066)
C5: (8.716,10.922,87.785)
C4: (8.081,11.013,86.560)
P: (7.634,18.368,85.904)
C4': (5.861,14.946,85.629)
C2': (5.121,12.739,85.808)
C2: (8.817,9.053,86.009)
N1: (9.508,8.815,87.141)
N3: (8.101,10.099,85.611)
N6: (10.166,9.515,89.165)
N7: (8.495,12.088,88.510)
N9: (7.443,12.210,86.529)
O5': (6.975,17.047,85.376)
O3': (3.704,14.594,86.609)
OP1: (10.610,2.223,87.638)
OP2: (11.555,2.092,85.309)
C3': (6.828,4.108,85.065)
C1': (7.558,5.838,83.654)
C5': (8.809,4.339,86.651)
O4': (8.398,5.807,84.782)
C8: (9.247,4.377,82.407)
O2': (5.337,5.945,84.529)
C6: (8.054,4.693,79.081)
C5: (8.438,4.661,80.426)
C4: (7.671,5.396,81.266)
P: (10.930,2.878,86.382)
C4': (7.761,5.022,85.832)
C2': (6.295,5.045,83.996)
C2: (6.369,6.091,79.597)
N1: (7.034,5.435,78.660)
N3: (6.580,6.142,80.910)
N6: (8.653,4.044,78.148)
N7: (9.426,4.039,81.164)
N9: (8.233,5.232,82.512)
O5': (9.657,3.589,85.819)
O3': (5.828,3.548,85.874)
OP2: (11.555,2.092,85.309)
C3': (6.828,4.108,85.065)
C1': (7.558,5.838,83.654)
C5': (8.809,4.339,86.651)
O4': (8.398,5.807,84.782)
C8: (9.247,4.377,82.407)
O2': (5.337,5.945,84.529)
C6: (8.054,4.693,79.081)
C5: (8.438,4.661,80.426)
C4: (7.671,5.396,81.266)
P: (10.930,2.878,86.382)
C4': (7.761,5.022,85.832)
C2': (6.295,5.045,83.996)
C2: (6.369,6.091,79.597)
N1: (7.034,5.435,78.660)
N3: (6.580,6.142,80.910)
N6: (8.653,4.044,78.148)
N7: (9.426,4.039,81.164)
N9: (8.233,5.232,82.512)
O5': (9.657,3.589,85.819)
O3': (5.828,3.548,85.874)
Image (generated by PyMOL):