ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0417:0371

Extra

PDB:
ATOM 1 O3' G A 416 80.988 97.804 14.704 1.00 50.35 O
ATOM 2 P A A 417 81.370 99.343 14.589 1.00 48.27 P
ATOM 3 OP1 A A 417 80.136 100.101 14.250 1.00 46.53 O
ATOM 4 OP2 A A 417 82.546 99.407 13.688 1.00 49.40 O
ATOM 5 O5' A A 417 81.796 99.701 16.079 1.00 48.41 O
ATOM 6 C5' A A 417 80.816 99.733 17.139 1.00 43.80 C
ATOM 7 C4' A A 417 81.506 99.880 18.468 1.00 42.93 C
ATOM 8 O4' A A 417 82.133 98.632 18.850 1.00 40.02 O
ATOM 9 C3' A A 417 82.634 100.892 18.446 1.00 42.30 C
ATOM 10 O3' A A 417 82.111 102.198 18.632 1.00 45.27 O
ATOM 11 C2' A A 417 83.534 100.405 19.573 1.00 42.41 C
ATOM 12 O2' A A 417 83.052 100.765 20.854 1.00 41.66 O
ATOM 13 C1' A A 417 83.404 98.889 19.417 1.00 40.03 C
ATOM 14 N9 A A 417 84.401 98.269 18.546 1.00 41.80 N
ATOM 15 C8 A A 417 84.213 97.827 17.256 1.00 39.96 C
ATOM 16 N7 A A 417 85.266 97.247 16.740 1.00 41.41 N
ATOM 17 C5 A A 417 86.217 97.318 17.750 1.00 40.52 C
ATOM 18 C6 A A 417 87.543 96.861 17.834 1.00 39.83 C
ATOM 19 N6 A A 417 88.160 96.193 16.860 1.00 39.07 N
ATOM 20 N1 A A 417 88.221 97.110 18.974 1.00 40.03 N
ATOM 21 C2 A A 417 87.597 97.766 19.955 1.00 38.00 C
ATOM 22 N3 A A 417 86.354 98.234 20.000 1.00 38.75 N
ATOM 23 C4 A A 417 85.707 97.971 18.856 1.00 40.17 C
ATOM 24 P A A 418 82.631 103.401 17.708 1.00 48.38 P
ATOM 25 OP1 A A 418 81.674 104.525 17.859 1.00 50.23 O
ATOM 26 OP2 A A 418 82.929 102.865 16.351 1.00 48.36 O
ATOM 27 O5' A A 418 84.008 103.814 18.385 1.00 46.13 O
TER

ATOM 1 O3' U B 370 88.656 100.730 24.587 1.00 43.93 O
ATOM 2 P A B 371 88.285 99.791 25.833 1.00 45.68 P
ATOM 3 OP1 A B 371 86.878 100.104 26.182 1.00 45.16 O
ATOM 4 OP2 A B 371 89.349 99.889 26.875 1.00 45.11 O
ATOM 5 O5' A B 371 88.334 98.324 25.223 1.00 47.03 O
ATOM 6 C5' A B 371 87.421 97.939 24.184 1.00 49.37 C
ATOM 7 C4' A B 371 87.763 96.564 23.675 1.00 50.39 C
ATOM 8 O4' A B 371 88.990 96.607 22.902 1.00 48.98 O
ATOM 9 C3' A B 371 88.051 95.522 24.742 1.00 49.27 C
ATOM 10 O3' A B 371 86.856 95.013 25.323 1.00 51.16 O
ATOM 11 C2' A B 371 88.815 94.476 23.946 1.00 49.26 C
ATOM 12 O2' A B 371 87.951 93.697 23.144 1.00 49.08 O
ATOM 13 C1' A B 371 89.667 95.364 23.032 1.00 49.36 C
ATOM 14 N9 A B 371 91.013 95.609 23.554 1.00 48.30 N
ATOM 15 C8 A B 371 91.511 96.739 24.160 1.00 48.63 C
ATOM 16 N7 A B 371 92.769 96.636 24.520 1.00 48.51 N
ATOM 17 C5 A B 371 93.125 95.356 24.123 1.00 47.47 C
ATOM 18 C6 A B 371 94.326 94.635 24.219 1.00 46.65 C
ATOM 19 N6 A B 371 95.441 95.121 24.759 1.00 45.71 N
ATOM 20 N1 A B 371 94.343 93.374 23.731 1.00 47.99 N
ATOM 21 C2 A B 371 93.225 92.885 23.184 1.00 47.28 C
ATOM 22 N3 A B 371 92.037 93.465 23.031 1.00 47.07 N
ATOM 23 C4 A B 371 92.053 94.712 23.528 1.00 47.83 C
ATOM 24 P G B 372 86.778 94.781 26.916 1.00 51.67 P
ATOM 25 OP1 G B 372 85.541 94.001 27.156 1.00 54.59 O
ATOM 26 OP2 G B 372 86.967 96.073 27.621 1.00 53.25 O
ATOM 27 O5' G B 372 88.042 93.865 27.235 1.00 48.12 O
TER

Atoms:
OP1: (80.136,100.101,14.250)
OP2: (82.546,99.407,13.688)
C3': (82.634,100.892,18.446)
C1': (83.404,98.889,19.417)
C5': (80.816,99.733,17.139)
O4': (82.133,98.632,18.850)
C8: (84.213,97.827,17.256)
O2': (83.052,100.765,20.854)
C6: (87.543,96.861,17.834)
C5: (86.217,97.318,17.750)
C4: (85.707,97.971,18.856)
P: (81.370,99.343,14.589)
C4': (81.506,99.880,18.468)
C2': (83.534,100.405,19.573)
C2: (87.597,97.766,19.955)
N1: (88.221,97.110,18.974)
N3: (86.354,98.234,20.000)
N6: (88.160,96.193,16.860)
N7: (85.266,97.247,16.740)
N9: (84.401,98.269,18.546)
O5': (81.796,99.701,16.079)
O3': (82.111,102.198,18.632)
OP1: (86.878,100.104,26.182)
OP2: (89.349,99.889,26.875)
C3': (88.051,95.522,24.742)
C1': (89.667,95.364,23.032)
C5': (87.421,97.939,24.184)
O4': (88.990,96.607,22.902)
C8: (91.511,96.739,24.160)
O2': (87.951,93.697,23.144)
C6: (94.326,94.635,24.219)
C5: (93.125,95.356,24.123)
C4: (92.053,94.712,23.528)
P: (88.285,99.791,25.833)
C4': (87.763,96.564,23.675)
C2': (88.815,94.476,23.946)
C2: (93.225,92.885,23.184)
N1: (94.343,93.374,23.731)
N3: (92.037,93.465,23.031)
N6: (95.441,95.121,24.759)
N7: (92.769,96.636,24.520)
N9: (91.013,95.609,23.554)
O5': (88.334,98.324,25.223)
O3': (86.856,95.013,25.323)
Image (generated by PyMOL):
PyMOL image
show in jmol