ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0139:0429

Extra

PDB:
ATOM 1 O3' G A 138 61.449 131.884 37.277 1.00 58.03 O
ATOM 2 P A A 139 61.708 131.754 38.865 1.00 64.13 P
ATOM 3 OP1 A A 139 61.061 132.956 39.479 1.00 58.99 O
ATOM 4 OP2 A A 139 63.147 131.472 39.133 1.00 61.30 O
ATOM 5 O5' A A 139 60.894 130.450 39.277 1.00 64.14 O
ATOM 6 C5' A A 139 60.072 130.417 40.462 1.00 65.61 C
ATOM 7 C4' A A 139 59.103 129.266 40.372 1.00 66.17 C
ATOM 8 O4' A A 139 58.176 129.495 39.275 1.00 66.14 O
ATOM 9 C3' A A 139 59.774 127.944 40.044 1.00 65.95 C
ATOM 10 O3' A A 139 60.269 127.337 41.236 1.00 65.74 O
ATOM 11 C2' A A 139 58.657 127.168 39.349 1.00 66.00 C
ATOM 12 O2' A A 139 57.721 126.594 40.244 1.00 66.25 O
ATOM 13 C1' A A 139 57.959 128.283 38.567 1.00 65.02 C
ATOM 14 N9 A A 139 58.440 128.474 37.197 1.00 64.23 N
ATOM 15 C8 A A 139 59.357 129.400 36.767 1.00 62.30 C
ATOM 16 N7 A A 139 59.554 129.391 35.474 1.00 61.16 N
ATOM 17 C5 A A 139 58.724 128.381 35.017 1.00 61.80 C
ATOM 18 C6 A A 139 58.473 127.884 33.733 1.00 61.45 C
ATOM 19 N6 A A 139 59.065 128.358 32.630 1.00 59.08 N
ATOM 20 N1 A A 139 57.587 126.871 33.615 1.00 60.70 N
ATOM 21 C2 A A 139 57.005 126.397 34.723 1.00 61.34 C
ATOM 22 N3 A A 139 57.159 126.782 35.987 1.00 61.97 N
ATOM 23 C4 A A 139 58.042 127.793 36.068 1.00 63.48 C
ATOM 24 P A A 140 61.794 126.822 41.307 1.00 67.17 P
ATOM 25 OP1 A A 140 62.090 126.693 42.754 1.00 70.36 O
ATOM 26 OP2 A A 140 62.666 127.666 40.449 1.00 67.00 O
ATOM 27 O5' A A 140 61.761 125.347 40.705 1.00 62.86 O
TER

ATOM 1 O3' C B 428 55.590 120.793 37.789 1.00 62.20 O
ATOM 2 P A B 429 54.130 121.173 38.335 1.00 66.51 P
ATOM 3 OP1 A B 429 54.195 121.050 39.813 1.00 66.40 O
ATOM 4 OP2 A B 429 53.113 120.400 37.578 1.00 65.69 O
ATOM 5 O5' A B 429 53.968 122.709 37.964 1.00 66.21 O
ATOM 6 C5' A B 429 55.045 123.638 38.173 1.00 71.45 C
ATOM 7 C4' A B 429 54.805 124.897 37.370 1.00 74.88 C
ATOM 8 O4' A B 429 54.829 124.589 35.946 1.00 77.68 O
ATOM 9 C3' A B 429 53.470 125.586 37.616 1.00 75.05 C
ATOM 10 O3' A B 429 53.602 126.982 37.446 1.00 72.41 O
ATOM 11 C2' A B 429 52.561 124.969 36.554 1.00 77.00 C
ATOM 12 O2' A B 429 51.482 125.793 36.152 1.00 76.54 O
ATOM 13 C1' A B 429 53.527 124.720 35.394 1.00 78.09 C
ATOM 14 N9 A B 429 53.194 123.465 34.715 1.00 81.04 N
ATOM 15 C8 A B 429 53.101 122.210 35.276 1.00 81.52 C
ATOM 16 N7 A B 429 52.733 121.279 34.434 1.00 81.80 N
ATOM 17 C5 A B 429 52.583 121.958 33.233 1.00 82.28 C
ATOM 18 C6 A B 429 52.196 121.534 31.956 1.00 82.41 C
ATOM 19 N6 A B 429 51.865 120.272 31.665 1.00 82.80 N
ATOM 20 N1 A B 429 52.155 122.459 30.974 1.00 82.32 N
ATOM 21 C2 A B 429 52.477 123.722 31.269 1.00 82.27 C
ATOM 22 N3 A B 429 52.847 124.247 32.432 1.00 82.27 N
ATOM 23 C4 A B 429 52.880 123.302 33.387 1.00 81.54 C
ATOM 24 P A B 430 52.793 127.964 38.412 1.00 69.87 P
ATOM 25 OP1 A B 430 53.365 127.776 39.770 1.00 71.97 O
ATOM 26 OP2 A B 430 51.344 127.747 38.194 1.00 69.52 O
ATOM 27 O5' A B 430 53.168 129.412 37.866 1.00 71.53 O
TER

Atoms:
OP1: (61.061,132.956,39.479)
OP2: (63.147,131.472,39.133)
C3': (59.774,127.944,40.044)
C1': (57.959,128.283,38.567)
C5': (60.072,130.417,40.462)
O4': (58.176,129.495,39.275)
C8: (59.357,129.400,36.767)
O2': (57.721,126.594,40.244)
C6: (58.473,127.884,33.733)
C5: (58.724,128.381,35.017)
C4: (58.042,127.793,36.068)
P: (61.708,131.754,38.865)
C4': (59.103,129.266,40.372)
C2': (58.657,127.168,39.349)
C2: (57.005,126.397,34.723)
N1: (57.587,126.871,33.615)
N3: (57.159,126.782,35.987)
N6: (59.065,128.358,32.630)
N7: (59.554,129.391,35.474)
N9: (58.440,128.474,37.197)
O5': (60.894,130.450,39.277)
O3': (60.269,127.337,41.236)
OP1: (54.195,121.050,39.813)
OP2: (53.113,120.400,37.578)
C3': (53.470,125.586,37.616)
C1': (53.527,124.720,35.394)
C5': (55.045,123.638,38.173)
O4': (54.829,124.589,35.946)
C8: (53.101,122.210,35.276)
O2': (51.482,125.793,36.152)
C6: (52.196,121.534,31.956)
C5: (52.583,121.958,33.233)
C4: (52.880,123.302,33.387)
P: (54.130,121.173,38.335)
C4': (54.805,124.897,37.370)
C2': (52.561,124.969,36.554)
C2: (52.477,123.722,31.269)
N1: (52.155,122.459,30.974)
N3: (52.847,124.247,32.432)
N6: (51.865,120.272,31.665)
N7: (52.733,121.279,34.434)
N9: (53.194,123.465,34.715)
O5': (53.968,122.709,37.964)
O3': (53.602,126.982,37.446)
Image (generated by PyMOL):
PyMOL image
show in jmol