ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0507:0627

Extra

PDB:
ATOM 1 O3' G A 506 25.050 140.617 69.812 1.00 33.64 O
ATOM 2 P A A 507 24.806 140.678 71.394 1.00 34.40 P
ATOM 3 OP1 A A 507 23.375 140.974 71.658 1.00 32.93 O
ATOM 4 OP2 A A 507 25.855 141.558 71.982 1.00 31.84 O
ATOM 5 O5' A A 507 25.095 139.183 71.849 1.00 34.19 O
ATOM 6 C5' A A 507 24.159 138.128 71.580 1.00 34.74 C
ATOM 7 C4' A A 507 24.772 136.796 71.940 1.00 36.19 C
ATOM 8 O4' A A 507 25.694 136.357 70.910 1.00 33.53 O
ATOM 9 C3' A A 507 25.585 136.837 73.219 1.00 34.81 C
ATOM 10 O3' A A 507 24.766 136.615 74.346 1.00 34.31 O
ATOM 11 C2' A A 507 26.617 135.748 73.002 1.00 35.50 C
ATOM 12 O2' A A 507 26.083 134.469 73.261 1.00 38.36 O
ATOM 13 C1' A A 507 26.897 135.910 71.507 1.00 34.57 C
ATOM 14 N9 A A 507 27.931 136.899 71.194 1.00 34.98 N
ATOM 15 C8 A A 507 27.740 138.118 70.594 1.00 35.29 C
ATOM 16 N7 A A 507 28.842 138.784 70.389 1.00 36.53 N
ATOM 17 C5 A A 507 29.831 137.956 70.897 1.00 35.98 C
ATOM 18 C6 A A 507 31.226 138.089 70.966 1.00 36.70 C
ATOM 19 N6 A A 507 31.892 139.146 70.488 1.00 33.74 N
ATOM 20 N1 A A 507 31.925 137.084 71.540 1.00 36.62 N
ATOM 21 C2 A A 507 31.254 136.024 72.000 1.00 35.07 C
ATOM 22 N3 A A 507 29.946 135.782 71.986 1.00 34.80 N
ATOM 23 C4 A A 507 29.283 136.798 71.411 1.00 34.55 C
ATOM 24 P A A 508 25.100 137.365 75.718 1.00 36.34 P
ATOM 25 OP1 A A 508 23.957 137.099 76.627 1.00 35.25 O
ATOM 26 OP2 A A 508 25.491 138.770 75.430 1.00 34.54 O
ATOM 27 O5' A A 508 26.393 136.596 76.239 1.00 35.17 O
TER

ATOM 1 O3' C B 626 32.514 131.208 77.516 1.00 30.67 O
ATOM 2 P A B 627 32.624 130.058 76.403 1.00 31.93 P
ATOM 3 OP1 A B 627 31.273 129.450 76.325 1.00 33.09 O
ATOM 4 OP2 A B 627 33.795 129.200 76.667 1.00 33.45 O
ATOM 5 O5' A B 627 32.902 130.844 75.045 1.00 32.26 O
ATOM 6 C5' A B 627 31.881 131.647 74.433 1.00 30.15 C
ATOM 7 C4' A B 627 32.447 132.413 73.262 1.00 32.64 C
ATOM 8 O4' A B 627 33.518 133.286 73.715 1.00 33.27 O
ATOM 9 C3' A B 627 33.091 131.567 72.181 1.00 33.02 C
ATOM 10 O3' A B 627 32.111 131.052 71.296 1.00 32.81 O
ATOM 11 C2' A B 627 34.024 132.569 71.517 1.00 33.84 C
ATOM 12 O2' A B 627 33.325 133.474 70.690 1.00 36.06 O
ATOM 13 C1' A B 627 34.538 133.342 72.733 1.00 32.80 C
ATOM 14 N9 A B 627 35.756 132.777 73.319 1.00 34.75 N
ATOM 15 C8 A B 627 35.850 132.003 74.450 1.00 33.59 C
ATOM 16 N7 A B 627 37.079 131.671 74.760 1.00 36.31 N
ATOM 17 C5 A B 627 37.848 132.258 73.763 1.00 35.96 C
ATOM 18 C6 A B 627 39.236 132.291 73.531 1.00 36.46 C
ATOM 19 N6 A B 627 40.136 131.713 74.327 1.00 35.92 N
ATOM 20 N1 A B 627 39.675 132.953 72.439 1.00 38.11 N
ATOM 21 C2 A B 627 38.780 133.550 71.652 1.00 36.10 C
ATOM 22 N3 A B 627 37.456 133.605 71.773 1.00 37.71 N
ATOM 23 C4 A B 627 37.046 132.930 72.861 1.00 35.56 C
ATOM 24 P G B 628 32.232 129.541 70.759 1.00 34.42 P
ATOM 25 OP1 G B 628 30.939 129.226 70.091 1.00 32.58 O
ATOM 26 OP2 G B 628 32.719 128.664 71.865 1.00 33.16 O
ATOM 27 O5' G B 628 33.375 129.619 69.651 1.00 29.93 O
TER

Atoms:
OP1: (23.375,140.974,71.658)
OP2: (25.855,141.558,71.982)
C3': (25.585,136.837,73.219)
C1': (26.897,135.910,71.507)
C5': (24.159,138.128,71.580)
O4': (25.694,136.357,70.910)
C8: (27.740,138.118,70.594)
O2': (26.083,134.469,73.261)
C6: (31.226,138.089,70.966)
C5: (29.831,137.956,70.897)
C4: (29.283,136.798,71.411)
P: (24.806,140.678,71.394)
C4': (24.772,136.796,71.940)
C2': (26.617,135.748,73.002)
C2: (31.254,136.024,72.000)
N1: (31.925,137.084,71.540)
N3: (29.946,135.782,71.986)
N6: (31.892,139.146,70.488)
N7: (28.842,138.784,70.389)
N9: (27.931,136.899,71.194)
O5': (25.095,139.183,71.849)
O3': (24.766,136.615,74.346)
OP1: (31.273,129.450,76.325)
OP2: (33.795,129.200,76.667)
C3': (33.091,131.567,72.181)
C1': (34.538,133.342,72.733)
C5': (31.881,131.647,74.433)
O4': (33.518,133.286,73.715)
C8: (35.850,132.003,74.450)
O2': (33.325,133.474,70.690)
C6: (39.236,132.291,73.531)
C5: (37.848,132.258,73.763)
C4: (37.046,132.930,72.861)
P: (32.624,130.058,76.403)
C4': (32.447,132.413,73.262)
C2': (34.024,132.569,71.517)
C2: (38.780,133.550,71.652)
N1: (39.675,132.953,72.439)
N3: (37.456,133.605,71.773)
N6: (40.136,131.713,74.327)
N7: (37.079,131.671,74.760)
N9: (35.756,132.777,73.319)
O5': (32.902,130.844,75.045)
O3': (32.111,131.052,71.296)
Image (generated by PyMOL):
PyMOL image
show in jmol