ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0507:0627

Extra

PDB:
ATOM 1 O3' G A 506 24.550 139.585 70.026 1.00 37.77 O
ATOM 2 P A A 507 24.411 139.652 71.635 1.00 36.71 P
ATOM 3 OP1 A A 507 23.012 140.000 71.987 1.00 34.95 O
ATOM 4 OP2 A A 507 25.521 140.491 72.153 1.00 35.29 O
ATOM 5 O5' A A 507 24.706 138.148 72.075 1.00 35.12 O
ATOM 6 C5' A A 507 23.817 137.070 71.708 1.00 35.34 C
ATOM 7 C4' A A 507 24.398 135.737 72.139 1.00 35.87 C
ATOM 8 O4' A A 507 25.279 135.158 71.137 1.00 35.63 O
ATOM 9 C3' A A 507 25.190 135.773 73.433 1.00 35.16 C
ATOM 10 O3' A A 507 24.324 135.579 74.541 1.00 35.22 O
ATOM 11 C2' A A 507 26.209 134.656 73.246 1.00 36.35 C
ATOM 12 O2' A A 507 25.657 133.387 73.541 1.00 35.73 O
ATOM 13 C1' A A 507 26.498 134.765 71.744 1.00 36.61 C
ATOM 14 N9 A A 507 27.508 135.765 71.376 1.00 40.02 N
ATOM 15 C8 A A 507 27.265 136.972 70.763 1.00 39.21 C
ATOM 16 N7 A A 507 28.343 137.664 70.511 1.00 39.72 N
ATOM 17 C5 A A 507 29.370 136.871 70.993 1.00 38.92 C
ATOM 18 C6 A A 507 30.766 137.048 71.011 1.00 38.98 C
ATOM 19 N6 A A 507 31.381 138.130 70.514 1.00 33.90 N
ATOM 20 N1 A A 507 31.515 136.065 71.562 1.00 39.78 N
ATOM 21 C2 A A 507 30.891 134.988 72.059 1.00 40.72 C
ATOM 22 N3 A A 507 29.585 134.709 72.098 1.00 41.10 N
ATOM 23 C4 A A 507 28.872 135.701 71.539 1.00 39.14 C
ATOM 24 P A A 508 24.650 136.293 75.938 1.00 35.42 P
ATOM 25 OP1 A A 508 23.510 135.966 76.818 1.00 40.56 O
ATOM 26 OP2 A A 508 24.989 137.715 75.694 1.00 36.74 O
ATOM 27 O5' A A 508 25.973 135.549 76.439 1.00 36.82 O
TER

ATOM 1 O3' C B 626 32.125 130.309 77.543 1.00 30.06 O
ATOM 2 P A B 627 32.174 129.139 76.440 1.00 34.10 P
ATOM 3 OP1 A B 627 30.791 128.624 76.388 1.00 33.91 O
ATOM 4 OP2 A B 627 33.290 128.200 76.699 1.00 29.82 O
ATOM 5 O5' A B 627 32.480 129.901 75.068 1.00 32.03 O
ATOM 6 C5' A B 627 31.467 130.701 74.430 1.00 32.06 C
ATOM 7 C4' A B 627 32.041 131.445 73.249 1.00 31.75 C
ATOM 8 O4' A B 627 33.131 132.296 73.712 1.00 33.92 O
ATOM 9 C3' A B 627 32.684 130.596 72.164 1.00 30.40 C
ATOM 10 O3' A B 627 31.740 130.014 71.276 1.00 32.04 O
ATOM 11 C2' A B 627 33.597 131.610 71.500 1.00 31.74 C
ATOM 12 O2' A B 627 32.879 132.560 70.731 1.00 29.23 O
ATOM 13 C1' A B 627 34.156 132.327 72.729 1.00 33.61 C
ATOM 14 N9 A B 627 35.343 131.673 73.285 1.00 34.48 N
ATOM 15 C8 A B 627 35.409 130.762 74.322 1.00 34.31 C
ATOM 16 N7 A B 627 36.628 130.407 74.636 1.00 33.34 N
ATOM 17 C5 A B 627 37.424 131.122 73.744 1.00 35.37 C
ATOM 18 C6 A B 627 38.820 131.217 73.579 1.00 36.34 C
ATOM 19 N6 A B 627 39.706 130.594 74.360 1.00 36.59 N
ATOM 20 N1 A B 627 39.282 131.997 72.577 1.00 37.56 N
ATOM 21 C2 A B 627 38.401 132.655 71.816 1.00 34.86 C
ATOM 22 N3 A B 627 37.074 132.676 71.892 1.00 35.98 N
ATOM 23 C4 A B 627 36.642 131.879 72.888 1.00 35.18 C
ATOM 24 P G B 628 31.951 128.498 70.764 1.00 32.62 P
ATOM 25 OP1 G B 628 30.674 128.078 70.151 1.00 35.62 O
ATOM 26 OP2 G B 628 32.558 127.672 71.827 1.00 34.59 O
ATOM 27 O5' G B 628 33.072 128.597 69.640 1.00 34.97 O
TER

Atoms:
OP1: (23.012,140.000,71.987)
OP2: (25.521,140.491,72.153)
C3': (25.190,135.773,73.433)
C1': (26.498,134.765,71.744)
C5': (23.817,137.070,71.708)
O4': (25.279,135.158,71.137)
C8: (27.265,136.972,70.763)
O2': (25.657,133.387,73.541)
C6: (30.766,137.048,71.011)
C5: (29.370,136.871,70.993)
C4: (28.872,135.701,71.539)
P: (24.411,139.652,71.635)
C4': (24.398,135.737,72.139)
C2': (26.209,134.656,73.246)
C2: (30.891,134.988,72.059)
N1: (31.515,136.065,71.562)
N3: (29.585,134.709,72.098)
N6: (31.381,138.130,70.514)
N7: (28.343,137.664,70.511)
N9: (27.508,135.765,71.376)
O5': (24.706,138.148,72.075)
O3': (24.324,135.579,74.541)
OP1: (30.791,128.624,76.388)
OP2: (33.290,128.200,76.699)
C3': (32.684,130.596,72.164)
C1': (34.156,132.327,72.729)
C5': (31.467,130.701,74.430)
O4': (33.131,132.296,73.712)
C8: (35.409,130.762,74.322)
O2': (32.879,132.560,70.731)
C6: (38.820,131.217,73.579)
C5: (37.424,131.122,73.744)
C4: (36.642,131.879,72.888)
P: (32.174,129.139,76.440)
C4': (32.041,131.445,73.249)
C2': (33.597,131.610,71.500)
C2: (38.401,132.655,71.816)
N1: (39.282,131.997,72.577)
N3: (37.074,132.676,71.892)
N6: (39.706,130.594,74.360)
N7: (36.628,130.407,74.636)
N9: (35.343,131.673,73.285)
O5': (32.480,129.901,75.068)
O3': (31.740,130.014,71.276)
Image (generated by PyMOL):
PyMOL image
show in jmol