Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01166:01150
Extra
PDB:
ATOM 1 O3' U A1165 54.819 86.157 173.683 1.00119.05 O
ATOM 2 P A A1166 53.893 84.925 174.127 1.00116.02 P
ATOM 3 OP1 A A1166 52.521 85.181 173.615 1.00116.35 O
ATOM 4 OP2 A A1166 54.100 84.667 175.578 1.00115.01 O
ATOM 5 O5' A A1166 54.507 83.708 173.309 1.00113.99 O
ATOM 6 C5' A A1166 54.203 82.363 173.674 1.00111.54 C
ATOM 7 C4' A A1166 55.449 81.518 173.638 1.00109.33 C
ATOM 8 O4' A A1166 56.491 82.133 174.433 1.00109.21 O
ATOM 9 C3' A A1166 55.264 80.142 174.242 1.00107.82 C
ATOM 10 O3' A A1166 54.730 79.276 173.255 1.00105.95 O
ATOM 11 C2' A A1166 56.679 79.769 174.660 1.00107.84 C
ATOM 12 O2' A A1166 57.452 79.290 173.580 1.00108.01 O
ATOM 13 C1' A A1166 57.232 81.129 175.105 1.00108.51 C
ATOM 14 N9 A A1166 57.162 81.399 176.543 1.00108.65 N
ATOM 15 C8 A A1166 56.580 82.479 177.164 1.00108.42 C
ATOM 16 N7 A A1166 56.684 82.460 178.469 1.00108.39 N
ATOM 17 C5 A A1166 57.379 81.288 178.729 1.00109.23 C
ATOM 18 C6 A A1166 57.803 80.689 179.927 1.00109.66 C
ATOM 19 N6 A A1166 57.577 81.208 181.136 1.00109.57 N
ATOM 20 N1 A A1166 58.474 79.519 179.841 1.00110.18 N
ATOM 21 C2 A A1166 58.694 78.994 178.627 1.00110.24 C
ATOM 22 N3 A A1166 58.342 79.460 177.431 1.00109.75 N
ATOM 23 C4 A A1166 57.681 80.624 177.553 1.00109.16 C
ATOM 24 P C A1167 53.174 78.887 173.299 1.00104.24 P
ATOM 25 OP1 C A1167 52.876 78.120 172.062 1.00104.92 O
ATOM 26 OP2 C A1167 52.362 80.089 173.633 1.00102.86 O
ATOM 27 O5' C A1167 53.102 77.875 174.518 1.00102.55 O
TER
ATOM 1 O3' G B1149 59.339 76.812 181.935 1.00103.73 O
ATOM 2 P A B1150 60.284 75.594 182.374 1.00106.52 P
ATOM 3 OP1 A B1150 59.468 74.355 182.422 1.00107.15 O
ATOM 4 OP2 A B1150 61.006 76.046 183.591 1.00107.03 O
ATOM 5 O5' A B1150 61.338 75.468 181.186 1.00108.60 O
ATOM 6 C5' A B1150 61.101 74.606 180.050 1.00112.73 C
ATOM 7 C4' A B1150 61.919 75.080 178.871 1.00115.89 C
ATOM 8 O4' A B1150 61.424 76.373 178.444 1.00116.40 O
ATOM 9 C3' A B1150 63.400 75.274 179.173 1.00117.32 C
ATOM 10 O3' A B1150 64.135 74.096 178.860 1.00119.97 O
ATOM 11 C2' A B1150 63.786 76.444 178.279 1.00116.81 C
ATOM 12 O2' A B1150 64.050 76.026 176.956 1.00115.96 O
ATOM 13 C1' A B1150 62.501 77.279 178.306 1.00116.85 C
ATOM 14 N9 A B1150 62.370 78.265 179.382 1.00116.86 N
ATOM 15 C8 A B1150 62.558 78.083 180.732 1.00117.00 C
ATOM 16 N7 A B1150 62.282 79.143 181.452 1.00117.10 N
ATOM 17 C5 A B1150 61.902 80.094 180.514 1.00117.07 C
ATOM 18 C6 A B1150 61.474 81.431 180.640 1.00117.13 C
ATOM 19 N6 A B1150 61.347 82.062 181.813 1.00116.56 N
ATOM 20 N1 A B1150 61.174 82.104 179.505 1.00116.59 N
ATOM 21 C2 A B1150 61.297 81.467 178.331 1.00116.52 C
ATOM 22 N3 A B1150 61.684 80.216 178.085 1.00116.14 N
ATOM 23 C4 A B1150 61.973 79.574 179.233 1.00116.80 C
ATOM 24 P A B1151 64.713 73.175 180.041 1.00123.24 P
ATOM 25 OP1 A B1151 65.010 71.864 179.411 1.00122.94 O
ATOM 26 OP2 A B1151 63.798 73.233 181.215 1.00122.65 O
ATOM 27 O5' A B1151 66.099 73.862 180.440 1.00125.39 O
TER
ATOM 2 P A A1166 53.893 84.925 174.127 1.00116.02 P
ATOM 3 OP1 A A1166 52.521 85.181 173.615 1.00116.35 O
ATOM 4 OP2 A A1166 54.100 84.667 175.578 1.00115.01 O
ATOM 5 O5' A A1166 54.507 83.708 173.309 1.00113.99 O
ATOM 6 C5' A A1166 54.203 82.363 173.674 1.00111.54 C
ATOM 7 C4' A A1166 55.449 81.518 173.638 1.00109.33 C
ATOM 8 O4' A A1166 56.491 82.133 174.433 1.00109.21 O
ATOM 9 C3' A A1166 55.264 80.142 174.242 1.00107.82 C
ATOM 10 O3' A A1166 54.730 79.276 173.255 1.00105.95 O
ATOM 11 C2' A A1166 56.679 79.769 174.660 1.00107.84 C
ATOM 12 O2' A A1166 57.452 79.290 173.580 1.00108.01 O
ATOM 13 C1' A A1166 57.232 81.129 175.105 1.00108.51 C
ATOM 14 N9 A A1166 57.162 81.399 176.543 1.00108.65 N
ATOM 15 C8 A A1166 56.580 82.479 177.164 1.00108.42 C
ATOM 16 N7 A A1166 56.684 82.460 178.469 1.00108.39 N
ATOM 17 C5 A A1166 57.379 81.288 178.729 1.00109.23 C
ATOM 18 C6 A A1166 57.803 80.689 179.927 1.00109.66 C
ATOM 19 N6 A A1166 57.577 81.208 181.136 1.00109.57 N
ATOM 20 N1 A A1166 58.474 79.519 179.841 1.00110.18 N
ATOM 21 C2 A A1166 58.694 78.994 178.627 1.00110.24 C
ATOM 22 N3 A A1166 58.342 79.460 177.431 1.00109.75 N
ATOM 23 C4 A A1166 57.681 80.624 177.553 1.00109.16 C
ATOM 24 P C A1167 53.174 78.887 173.299 1.00104.24 P
ATOM 25 OP1 C A1167 52.876 78.120 172.062 1.00104.92 O
ATOM 26 OP2 C A1167 52.362 80.089 173.633 1.00102.86 O
ATOM 27 O5' C A1167 53.102 77.875 174.518 1.00102.55 O
TER
ATOM 1 O3' G B1149 59.339 76.812 181.935 1.00103.73 O
ATOM 2 P A B1150 60.284 75.594 182.374 1.00106.52 P
ATOM 3 OP1 A B1150 59.468 74.355 182.422 1.00107.15 O
ATOM 4 OP2 A B1150 61.006 76.046 183.591 1.00107.03 O
ATOM 5 O5' A B1150 61.338 75.468 181.186 1.00108.60 O
ATOM 6 C5' A B1150 61.101 74.606 180.050 1.00112.73 C
ATOM 7 C4' A B1150 61.919 75.080 178.871 1.00115.89 C
ATOM 8 O4' A B1150 61.424 76.373 178.444 1.00116.40 O
ATOM 9 C3' A B1150 63.400 75.274 179.173 1.00117.32 C
ATOM 10 O3' A B1150 64.135 74.096 178.860 1.00119.97 O
ATOM 11 C2' A B1150 63.786 76.444 178.279 1.00116.81 C
ATOM 12 O2' A B1150 64.050 76.026 176.956 1.00115.96 O
ATOM 13 C1' A B1150 62.501 77.279 178.306 1.00116.85 C
ATOM 14 N9 A B1150 62.370 78.265 179.382 1.00116.86 N
ATOM 15 C8 A B1150 62.558 78.083 180.732 1.00117.00 C
ATOM 16 N7 A B1150 62.282 79.143 181.452 1.00117.10 N
ATOM 17 C5 A B1150 61.902 80.094 180.514 1.00117.07 C
ATOM 18 C6 A B1150 61.474 81.431 180.640 1.00117.13 C
ATOM 19 N6 A B1150 61.347 82.062 181.813 1.00116.56 N
ATOM 20 N1 A B1150 61.174 82.104 179.505 1.00116.59 N
ATOM 21 C2 A B1150 61.297 81.467 178.331 1.00116.52 C
ATOM 22 N3 A B1150 61.684 80.216 178.085 1.00116.14 N
ATOM 23 C4 A B1150 61.973 79.574 179.233 1.00116.80 C
ATOM 24 P A B1151 64.713 73.175 180.041 1.00123.24 P
ATOM 25 OP1 A B1151 65.010 71.864 179.411 1.00122.94 O
ATOM 26 OP2 A B1151 63.798 73.233 181.215 1.00122.65 O
ATOM 27 O5' A B1151 66.099 73.862 180.440 1.00125.39 O
TER
Atoms:
OP1: (52.521,85.181,173.615)
OP2: (54.100,84.667,175.578)
C3': (55.264,80.142,174.242)
C1': (57.232,81.129,175.105)
C5': (54.203,82.363,173.674)
O4': (56.491,82.133,174.433)
C8: (56.580,82.479,177.164)
O2': (57.452,79.290,173.580)
C6: (57.803,80.689,179.927)
C5: (57.379,81.288,178.729)
C4: (57.681,80.624,177.553)
P: (53.893,84.925,174.127)
C4': (55.449,81.518,173.638)
C2': (56.679,79.769,174.660)
C2: (58.694,78.994,178.627)
N1: (58.474,79.519,179.841)
N3: (58.342,79.460,177.431)
N6: (57.577,81.208,181.136)
N7: (56.684,82.460,178.469)
N9: (57.162,81.399,176.543)
O5': (54.507,83.708,173.309)
O3': (54.730,79.276,173.255)
OP2: (54.100,84.667,175.578)
C3': (55.264,80.142,174.242)
C1': (57.232,81.129,175.105)
C5': (54.203,82.363,173.674)
O4': (56.491,82.133,174.433)
C8: (56.580,82.479,177.164)
O2': (57.452,79.290,173.580)
C6: (57.803,80.689,179.927)
C5: (57.379,81.288,178.729)
C4: (57.681,80.624,177.553)
P: (53.893,84.925,174.127)
C4': (55.449,81.518,173.638)
C2': (56.679,79.769,174.660)
C2: (58.694,78.994,178.627)
N1: (58.474,79.519,179.841)
N3: (58.342,79.460,177.431)
N6: (57.577,81.208,181.136)
N7: (56.684,82.460,178.469)
N9: (57.162,81.399,176.543)
O5': (54.507,83.708,173.309)
O3': (54.730,79.276,173.255)
OP1: (59.468,74.355,182.422)
OP2: (61.006,76.046,183.591)
C3': (63.400,75.274,179.173)
C1': (62.501,77.279,178.306)
C5': (61.101,74.606,180.050)
O4': (61.424,76.373,178.444)
C8: (62.558,78.083,180.732)
O2': (64.050,76.026,176.956)
C6: (61.474,81.431,180.640)
C5: (61.902,80.094,180.514)
C4: (61.973,79.574,179.233)
P: (60.284,75.594,182.374)
C4': (61.919,75.080,178.871)
C2': (63.786,76.444,178.279)
C2: (61.297,81.467,178.331)
N1: (61.174,82.104,179.505)
N3: (61.684,80.216,178.085)
N6: (61.347,82.062,181.813)
N7: (62.282,79.143,181.452)
N9: (62.370,78.265,179.382)
O5': (61.338,75.468,181.186)
O3': (64.135,74.096,178.860)
OP2: (61.006,76.046,183.591)
C3': (63.400,75.274,179.173)
C1': (62.501,77.279,178.306)
C5': (61.101,74.606,180.050)
O4': (61.424,76.373,178.444)
C8: (62.558,78.083,180.732)
O2': (64.050,76.026,176.956)
C6: (61.474,81.431,180.640)
C5: (61.902,80.094,180.514)
C4: (61.973,79.574,179.233)
P: (60.284,75.594,182.374)
C4': (61.919,75.080,178.871)
C2': (63.786,76.444,178.279)
C2: (61.297,81.467,178.331)
N1: (61.174,82.104,179.505)
N3: (61.684,80.216,178.085)
N6: (61.347,82.062,181.813)
N7: (62.282,79.143,181.452)
N9: (62.370,78.265,179.382)
O5': (61.338,75.468,181.186)
O3': (64.135,74.096,178.860)
Image (generated by PyMOL):