Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CMA:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.584 87.593 97.497 1.00 34.39 O
ATOM 2 P U A1223 7.224 87.817 95.956 1.00 34.68 P
ATOM 3 OP1 U A1223 6.362 86.678 95.562 1.00 34.54 O
ATOM 4 OP2 U A1223 8.477 88.079 95.204 1.00 34.52 O
ATOM 5 O5' U A1223 6.365 89.159 95.973 1.00 33.24 O
ATOM 6 C5' U A1223 5.040 89.165 96.514 1.00 35.42 C
ATOM 7 C4' U A1223 4.463 90.556 96.483 1.00 37.47 C
ATOM 8 O4' U A1223 5.257 91.429 97.324 1.00 39.17 O
ATOM 9 C3' U A1223 4.467 91.249 95.134 1.00 38.50 C
ATOM 10 O3' U A1223 3.386 90.837 94.319 1.00 40.42 O
ATOM 11 C2' U A1223 4.369 92.713 95.526 1.00 38.54 C
ATOM 12 O2' U A1223 3.055 93.092 95.862 1.00 37.59 O
ATOM 13 C1' U A1223 5.259 92.741 96.774 1.00 39.56 C
ATOM 14 N1 U A1223 6.646 93.118 96.449 1.00 39.53 N
ATOM 15 C2 U A1223 6.958 94.461 96.471 1.00 38.81 C
ATOM 16 O2 U A1223 6.163 95.318 96.807 1.00 37.94 O
ATOM 17 N3 U A1223 8.239 94.763 96.091 1.00 39.27 N
ATOM 18 C4 U A1223 9.225 93.876 95.716 1.00 39.13 C
ATOM 19 O4 U A1223 10.325 94.309 95.371 1.00 40.99 O
ATOM 20 C5 U A1223 8.838 92.501 95.751 1.00 37.05 C
ATOM 21 C6 U A1223 7.597 92.176 96.107 1.00 37.81 C
ATOM 22 P G A1224 3.507 90.960 92.724 1.00 42.57 P
ATOM 23 OP1 G A1224 2.549 89.999 92.126 1.00 41.01 O
ATOM 24 OP2 G A1224 4.951 90.875 92.359 1.00 44.03 O
ATOM 25 O5' G A1224 2.976 92.429 92.430 1.00 38.66 O
TER
ATOM 1 O3' G B 552 -5.849 93.175 96.798 1.00 46.41 O
ATOM 2 P A B 553 -5.370 92.195 97.976 1.00 47.33 P
ATOM 3 OP1 A B 553 -5.991 90.865 97.757 1.00 46.29 O
ATOM 4 OP2 A B 553 -5.539 92.880 99.277 1.00 46.81 O
ATOM 5 O5' A B 553 -3.812 92.036 97.698 1.00 45.96 O
ATOM 6 C5' A B 553 -3.348 91.403 96.495 1.00 44.90 C
ATOM 7 C4' A B 553 -1.858 91.570 96.356 1.00 44.00 C
ATOM 8 O4' A B 553 -1.531 92.937 95.995 1.00 44.05 O
ATOM 9 C3' A B 553 -1.055 91.335 97.618 1.00 44.41 C
ATOM 10 O3' A B 553 -0.904 89.947 97.876 1.00 43.91 O
ATOM 11 C2' A B 553 0.253 92.047 97.292 1.00 43.87 C
ATOM 12 O2' A B 553 1.067 91.293 96.416 1.00 44.33 O
ATOM 13 C1' A B 553 -0.259 93.271 96.527 1.00 42.81 C
ATOM 14 N9 A B 553 -0.387 94.498 97.317 1.00 40.52 N
ATOM 15 C8 A B 553 -1.520 95.016 97.892 1.00 40.40 C
ATOM 16 N7 A B 553 -1.329 96.163 98.500 1.00 41.22 N
ATOM 17 C5 A B 553 0.025 96.413 98.324 1.00 40.14 C
ATOM 18 C6 A B 553 0.850 97.484 98.718 1.00 38.89 C
ATOM 19 N6 A B 553 0.412 98.542 99.391 1.00 37.54 N
ATOM 20 N1 A B 553 2.156 97.428 98.385 1.00 39.26 N
ATOM 21 C2 A B 553 2.595 96.369 97.695 1.00 39.78 C
ATOM 22 N3 A B 553 1.919 95.306 97.260 1.00 40.85 N
ATOM 23 C4 A B 553 0.622 95.390 97.609 1.00 40.79 C
ATOM 24 P A B 554 -0.954 89.411 99.390 1.00 44.58 P
ATOM 25 OP1 A B 554 -1.094 87.932 99.316 1.00 42.36 O
ATOM 26 OP2 A B 554 -1.937 90.218 100.177 1.00 42.89 O
ATOM 27 O5' A B 554 0.490 89.752 99.967 1.00 44.03 O
TER
ATOM 2 P U A1223 7.224 87.817 95.956 1.00 34.68 P
ATOM 3 OP1 U A1223 6.362 86.678 95.562 1.00 34.54 O
ATOM 4 OP2 U A1223 8.477 88.079 95.204 1.00 34.52 O
ATOM 5 O5' U A1223 6.365 89.159 95.973 1.00 33.24 O
ATOM 6 C5' U A1223 5.040 89.165 96.514 1.00 35.42 C
ATOM 7 C4' U A1223 4.463 90.556 96.483 1.00 37.47 C
ATOM 8 O4' U A1223 5.257 91.429 97.324 1.00 39.17 O
ATOM 9 C3' U A1223 4.467 91.249 95.134 1.00 38.50 C
ATOM 10 O3' U A1223 3.386 90.837 94.319 1.00 40.42 O
ATOM 11 C2' U A1223 4.369 92.713 95.526 1.00 38.54 C
ATOM 12 O2' U A1223 3.055 93.092 95.862 1.00 37.59 O
ATOM 13 C1' U A1223 5.259 92.741 96.774 1.00 39.56 C
ATOM 14 N1 U A1223 6.646 93.118 96.449 1.00 39.53 N
ATOM 15 C2 U A1223 6.958 94.461 96.471 1.00 38.81 C
ATOM 16 O2 U A1223 6.163 95.318 96.807 1.00 37.94 O
ATOM 17 N3 U A1223 8.239 94.763 96.091 1.00 39.27 N
ATOM 18 C4 U A1223 9.225 93.876 95.716 1.00 39.13 C
ATOM 19 O4 U A1223 10.325 94.309 95.371 1.00 40.99 O
ATOM 20 C5 U A1223 8.838 92.501 95.751 1.00 37.05 C
ATOM 21 C6 U A1223 7.597 92.176 96.107 1.00 37.81 C
ATOM 22 P G A1224 3.507 90.960 92.724 1.00 42.57 P
ATOM 23 OP1 G A1224 2.549 89.999 92.126 1.00 41.01 O
ATOM 24 OP2 G A1224 4.951 90.875 92.359 1.00 44.03 O
ATOM 25 O5' G A1224 2.976 92.429 92.430 1.00 38.66 O
TER
ATOM 1 O3' G B 552 -5.849 93.175 96.798 1.00 46.41 O
ATOM 2 P A B 553 -5.370 92.195 97.976 1.00 47.33 P
ATOM 3 OP1 A B 553 -5.991 90.865 97.757 1.00 46.29 O
ATOM 4 OP2 A B 553 -5.539 92.880 99.277 1.00 46.81 O
ATOM 5 O5' A B 553 -3.812 92.036 97.698 1.00 45.96 O
ATOM 6 C5' A B 553 -3.348 91.403 96.495 1.00 44.90 C
ATOM 7 C4' A B 553 -1.858 91.570 96.356 1.00 44.00 C
ATOM 8 O4' A B 553 -1.531 92.937 95.995 1.00 44.05 O
ATOM 9 C3' A B 553 -1.055 91.335 97.618 1.00 44.41 C
ATOM 10 O3' A B 553 -0.904 89.947 97.876 1.00 43.91 O
ATOM 11 C2' A B 553 0.253 92.047 97.292 1.00 43.87 C
ATOM 12 O2' A B 553 1.067 91.293 96.416 1.00 44.33 O
ATOM 13 C1' A B 553 -0.259 93.271 96.527 1.00 42.81 C
ATOM 14 N9 A B 553 -0.387 94.498 97.317 1.00 40.52 N
ATOM 15 C8 A B 553 -1.520 95.016 97.892 1.00 40.40 C
ATOM 16 N7 A B 553 -1.329 96.163 98.500 1.00 41.22 N
ATOM 17 C5 A B 553 0.025 96.413 98.324 1.00 40.14 C
ATOM 18 C6 A B 553 0.850 97.484 98.718 1.00 38.89 C
ATOM 19 N6 A B 553 0.412 98.542 99.391 1.00 37.54 N
ATOM 20 N1 A B 553 2.156 97.428 98.385 1.00 39.26 N
ATOM 21 C2 A B 553 2.595 96.369 97.695 1.00 39.78 C
ATOM 22 N3 A B 553 1.919 95.306 97.260 1.00 40.85 N
ATOM 23 C4 A B 553 0.622 95.390 97.609 1.00 40.79 C
ATOM 24 P A B 554 -0.954 89.411 99.390 1.00 44.58 P
ATOM 25 OP1 A B 554 -1.094 87.932 99.316 1.00 42.36 O
ATOM 26 OP2 A B 554 -1.937 90.218 100.177 1.00 42.89 O
ATOM 27 O5' A B 554 0.490 89.752 99.967 1.00 44.03 O
TER
Atoms:
C4: (9.225,93.876,95.716)
N3: (8.239,94.763,96.091)
OP1: (6.362,86.678,95.562)
OP2: (8.477,88.079,95.204)
C2: (6.958,94.461,96.471)
C1': (5.259,92.741,96.774)
C3': (4.467,91.249,95.134)
O5': (6.365,89.159,95.973)
O4': (5.257,91.429,97.324)
C5': (5.040,89.165,96.514)
P: (7.224,87.817,95.956)
C4': (4.463,90.556,96.483)
C2': (4.369,92.713,95.526)
O2': (3.055,93.092,95.862)
N1: (6.646,93.118,96.449)
O4: (10.325,94.309,95.371)
O2: (6.163,95.318,96.807)
C6: (7.597,92.176,96.107)
C5: (8.838,92.501,95.751)
O3': (3.386,90.837,94.319)
N3: (8.239,94.763,96.091)
OP1: (6.362,86.678,95.562)
OP2: (8.477,88.079,95.204)
C2: (6.958,94.461,96.471)
C1': (5.259,92.741,96.774)
C3': (4.467,91.249,95.134)
O5': (6.365,89.159,95.973)
O4': (5.257,91.429,97.324)
C5': (5.040,89.165,96.514)
P: (7.224,87.817,95.956)
C4': (4.463,90.556,96.483)
C2': (4.369,92.713,95.526)
O2': (3.055,93.092,95.862)
N1: (6.646,93.118,96.449)
O4: (10.325,94.309,95.371)
O2: (6.163,95.318,96.807)
C6: (7.597,92.176,96.107)
C5: (8.838,92.501,95.751)
O3': (3.386,90.837,94.319)
OP1: (-5.991,90.865,97.757)
OP2: (-5.539,92.880,99.277)
C3': (-1.055,91.335,97.618)
C1': (-0.259,93.271,96.527)
C5': (-3.348,91.403,96.495)
O4': (-1.531,92.937,95.995)
C8: (-1.520,95.016,97.892)
O2': (1.067,91.293,96.416)
C6: (0.850,97.484,98.718)
C5: (0.025,96.413,98.324)
C4: (0.622,95.390,97.609)
P: (-5.370,92.195,97.976)
C4': (-1.858,91.570,96.356)
C2': (0.253,92.047,97.292)
C2: (2.595,96.369,97.695)
N1: (2.156,97.428,98.385)
N3: (1.919,95.306,97.260)
N6: (0.412,98.542,99.391)
N7: (-1.329,96.163,98.500)
N9: (-0.387,94.498,97.317)
O5': (-3.812,92.036,97.698)
O3': (-0.904,89.947,97.876)
OP2: (-5.539,92.880,99.277)
C3': (-1.055,91.335,97.618)
C1': (-0.259,93.271,96.527)
C5': (-3.348,91.403,96.495)
O4': (-1.531,92.937,95.995)
C8: (-1.520,95.016,97.892)
O2': (1.067,91.293,96.416)
C6: (0.850,97.484,98.718)
C5: (0.025,96.413,98.324)
C4: (0.622,95.390,97.609)
P: (-5.370,92.195,97.976)
C4': (-1.858,91.570,96.356)
C2': (0.253,92.047,97.292)
C2: (2.595,96.369,97.695)
N1: (2.156,97.428,98.385)
N3: (1.919,95.306,97.260)
N6: (0.412,98.542,99.391)
N7: (-1.329,96.163,98.500)
N9: (-0.387,94.498,97.317)
O5': (-3.812,92.036,97.698)
O3': (-0.904,89.947,97.876)
Image (generated by PyMOL):