ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A318:A339

Extra

PDB:
ATOM 1 O3' G A 317 8.818 192.794 215.016 1.00 60.84 O
ATOM 2 P A A 318 9.454 191.820 216.121 1.00 86.94 P
ATOM 3 OP1 A A 318 10.919 192.027 216.163 1.00 94.26 O
ATOM 4 OP2 A A 318 8.901 190.455 215.907 1.00 88.68 O
ATOM 5 O5' A A 318 8.828 192.381 217.483 1.00 75.65 O
ATOM 6 C5' A A 318 8.354 193.703 217.563 1.00 68.46 C
ATOM 7 C4' A A 318 7.060 193.765 218.361 1.00 78.86 C
ATOM 8 O4' A A 318 5.916 193.555 217.499 1.00 79.91 O
ATOM 9 C3' A A 318 6.913 192.736 219.472 1.00 81.72 C
ATOM 10 O3' A A 318 7.473 193.275 220.649 1.00 78.29 O
ATOM 11 C2' A A 318 5.404 192.638 219.643 1.00 81.94 C
ATOM 12 O2' A A 318 4.925 193.617 220.551 1.00 77.39 O
ATOM 13 C1' A A 318 4.888 192.924 218.236 1.00 85.58 C
ATOM 14 N9 A A 318 4.519 191.758 217.453 1.00 82.32 N
ATOM 15 C8 A A 318 5.346 190.992 216.687 1.00 83.99 C
ATOM 16 N7 A A 318 4.734 190.009 216.076 1.00 81.52 N
ATOM 17 C5 A A 318 3.414 190.153 216.462 1.00 70.60 C
ATOM 18 C6 A A 318 2.252 189.428 216.153 1.00 72.83 C
ATOM 19 N6 A A 318 2.240 188.363 215.346 1.00 84.09 N
ATOM 20 N1 A A 318 1.098 189.839 216.712 1.00 78.28 N
ATOM 21 C2 A A 318 1.103 190.901 217.521 1.00 87.07 C
ATOM 22 N3 A A 318 2.131 191.663 217.882 1.00 89.79 N
ATOM 23 C4 A A 318 3.264 191.228 217.311 1.00 78.78 C
ATOM 24 P A A 319 8.619 192.497 221.448 1.00 64.72 P
ATOM 25 OP1 A A 319 9.322 193.528 222.255 1.00 56.71 O
ATOM 26 OP2 A A 319 9.362 191.627 220.493 1.00 68.78 O
ATOM 27 O5' A A 319 7.773 191.561 222.441 1.00 67.38 O
TER

ATOM 1 O3' C B 338 1.908 195.379 221.390 1.00 73.78 O
ATOM 2 P A B 339 0.845 196.505 220.983 1.00 77.11 P
ATOM 3 OP1 A B 339 1.613 197.598 220.343 1.00 82.55 O
ATOM 4 OP2 A B 339 -0.019 196.769 222.165 1.00 87.49 O
ATOM 5 O5' A B 339 -0.086 195.811 219.879 1.00 87.07 O
ATOM 6 C5' A B 339 0.479 195.285 218.685 1.00 85.30 C
ATOM 7 C4' A B 339 -0.566 194.476 217.946 1.00 73.40 C
ATOM 8 O4' A B 339 -0.780 193.216 218.626 1.00 73.53 O
ATOM 9 C3' A B 339 -1.930 195.139 217.907 1.00 75.09 C
ATOM 10 O3' A B 339 -1.991 195.998 216.766 1.00 78.81 O
ATOM 11 C2' A B 339 -2.869 193.939 217.799 1.00 80.87 C
ATOM 12 O2' A B 339 -3.005 193.483 216.466 1.00 85.06 O
ATOM 13 C1' A B 339 -2.157 192.883 218.640 1.00 76.39 C
ATOM 14 N9 A B 339 -2.608 192.809 220.028 1.00 77.15 N
ATOM 15 C8 A B 339 -1.964 193.315 221.114 1.00 82.75 C
ATOM 16 N7 A B 339 -2.585 193.108 222.247 1.00 88.26 N
ATOM 17 C5 A B 339 -3.718 192.416 221.879 1.00 74.97 C
ATOM 18 C6 A B 339 -4.786 191.910 222.632 1.00 72.79 C
ATOM 19 N6 A B 339 -4.874 192.039 223.960 1.00 74.48 N
ATOM 20 N1 A B 339 -5.759 191.266 221.964 1.00 72.62 N
ATOM 21 C2 A B 339 -5.657 191.152 220.637 1.00 78.46 C
ATOM 22 N3 A B 339 -4.701 191.591 219.822 1.00 75.08 N
ATOM 23 C4 A B 339 -3.750 192.221 220.516 1.00 74.14 C
ATOM 24 P G B 340 -1.698 197.574 216.888 1.00 78.60 P
ATOM 25 OP1 G B 340 -0.271 197.792 216.569 1.00 81.64 O
ATOM 26 OP2 G B 340 -2.282 198.102 218.156 1.00 69.34 O
ATOM 27 O5' G B 340 -2.549 198.106 215.646 1.00 83.56 O
TER

Atoms:
OP1: (10.919,192.027,216.163)
OP2: (8.901,190.455,215.907)
C3': (6.913,192.736,219.472)
C1': (4.888,192.924,218.236)
C5': (8.354,193.703,217.563)
O4': (5.916,193.555,217.499)
C8: (5.346,190.992,216.687)
O2': (4.925,193.617,220.551)
C6: (2.252,189.428,216.153)
C5: (3.414,190.153,216.462)
C4: (3.264,191.228,217.311)
P: (9.454,191.820,216.121)
C4': (7.060,193.765,218.361)
C2': (5.404,192.638,219.643)
C2: (1.103,190.901,217.521)
N1: (1.098,189.839,216.712)
N3: (2.131,191.663,217.882)
N6: (2.240,188.363,215.346)
N7: (4.734,190.009,216.076)
N9: (4.519,191.758,217.453)
O5': (8.828,192.381,217.483)
O3': (7.473,193.275,220.649)
OP1: (1.613,197.598,220.343)
OP2: (-0.019,196.769,222.165)
C3': (-1.930,195.139,217.907)
C1': (-2.157,192.883,218.640)
C5': (0.479,195.285,218.685)
O4': (-0.780,193.216,218.626)
C8: (-1.964,193.315,221.114)
O2': (-3.005,193.483,216.466)
C6: (-4.786,191.910,222.632)
C5: (-3.718,192.416,221.879)
C4: (-3.750,192.221,220.516)
P: (0.845,196.505,220.983)
C4': (-0.566,194.476,217.946)
C2': (-2.869,193.939,217.799)
C2: (-5.657,191.152,220.637)
N1: (-5.759,191.266,221.964)
N3: (-4.701,191.591,219.822)
N6: (-4.874,192.039,223.960)
N7: (-2.585,193.108,222.247)
N9: (-2.608,192.809,220.028)
O5': (-0.086,195.811,219.879)
O3': (-1.991,195.998,216.766)
Image (generated by PyMOL):
PyMOL image
show in jmol