ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0139:0429

Extra

PDB:
ATOM 1 O3' G A 138 61.669 131.798 37.332 1.00 53.16 O
ATOM 2 P A A 139 61.905 131.696 38.924 1.00 58.23 P
ATOM 3 OP1 A A 139 61.237 132.902 39.497 1.00 55.15 O
ATOM 4 OP2 A A 139 63.337 131.432 39.224 1.00 57.32 O
ATOM 5 O5' A A 139 61.091 130.397 39.352 1.00 58.73 O
ATOM 6 C5' A A 139 60.322 130.361 40.570 1.00 60.03 C
ATOM 7 C4' A A 139 59.313 129.243 40.500 1.00 60.53 C
ATOM 8 O4' A A 139 58.358 129.518 39.436 1.00 60.47 O
ATOM 9 C3' A A 139 59.928 127.904 40.136 1.00 60.66 C
ATOM 10 O3' A A 139 60.440 127.261 41.303 1.00 61.19 O
ATOM 11 C2' A A 139 58.766 127.176 39.461 1.00 60.24 C
ATOM 12 O2' A A 139 57.833 126.621 40.371 1.00 61.19 O
ATOM 13 C1' A A 139 58.083 128.326 38.716 1.00 58.05 C
ATOM 14 N9 A A 139 58.527 128.522 37.333 1.00 56.09 N
ATOM 15 C8 A A 139 59.374 129.495 36.859 1.00 54.08 C
ATOM 16 N7 A A 139 59.539 129.469 35.562 1.00 51.51 N
ATOM 17 C5 A A 139 58.763 128.399 35.148 1.00 52.80 C
ATOM 18 C6 A A 139 58.503 127.862 33.881 1.00 51.59 C
ATOM 19 N6 A A 139 59.011 128.360 32.751 1.00 49.04 N
ATOM 20 N1 A A 139 57.690 126.787 33.811 1.00 50.98 N
ATOM 21 C2 A A 139 57.175 126.298 34.944 1.00 51.77 C
ATOM 22 N3 A A 139 57.336 126.720 36.195 1.00 53.23 N
ATOM 23 C4 A A 139 58.150 127.790 36.230 1.00 54.49 C
ATOM 24 P A A 140 61.981 126.782 41.351 1.00 63.36 P
ATOM 25 OP1 A A 140 62.330 126.742 42.791 1.00 65.70 O
ATOM 26 OP2 A A 140 62.808 127.588 40.415 1.00 61.82 O
ATOM 27 O5' A A 140 61.961 125.277 40.832 1.00 58.58 O
TER

ATOM 1 O3' C B 428 55.743 120.815 37.886 1.00 58.52 O
ATOM 2 P A B 429 54.285 121.217 38.423 1.00 61.02 P
ATOM 3 OP1 A B 429 54.363 121.194 39.906 1.00 61.34 O
ATOM 4 OP2 A B 429 53.272 120.392 37.724 1.00 60.48 O
ATOM 5 O5' A B 429 54.099 122.726 37.964 1.00 62.16 O
ATOM 6 C5' A B 429 55.133 123.701 38.175 1.00 66.50 C
ATOM 7 C4' A B 429 54.862 124.923 37.332 1.00 69.78 C
ATOM 8 O4' A B 429 54.907 124.559 35.923 1.00 72.24 O
ATOM 9 C3' A B 429 53.499 125.565 37.546 1.00 70.18 C
ATOM 10 O3' A B 429 53.590 126.954 37.327 1.00 67.08 O
ATOM 11 C2' A B 429 52.629 124.899 36.484 1.00 71.60 C
ATOM 12 O2' A B 429 51.528 125.679 36.059 1.00 71.55 O
ATOM 13 C1' A B 429 53.620 124.688 35.342 1.00 72.42 C
ATOM 14 N9 A B 429 53.315 123.443 34.639 1.00 75.20 N
ATOM 15 C8 A B 429 53.298 122.166 35.157 1.00 75.49 C
ATOM 16 N7 A B 429 52.941 121.251 34.294 1.00 75.82 N
ATOM 17 C5 A B 429 52.719 121.967 33.125 1.00 76.65 C
ATOM 18 C6 A B 429 52.309 121.574 31.845 1.00 77.21 C
ATOM 19 N6 A B 429 52.031 120.312 31.513 1.00 77.97 N
ATOM 20 N1 A B 429 52.190 122.534 30.903 1.00 77.32 N
ATOM 21 C2 A B 429 52.463 123.798 31.238 1.00 77.16 C
ATOM 22 N3 A B 429 52.849 124.295 32.408 1.00 76.52 N
ATOM 23 C4 A B 429 52.959 123.316 33.321 1.00 75.99 C
ATOM 24 P A B 430 53.039 127.953 38.440 1.00 64.89 P
ATOM 25 OP1 A B 430 53.883 127.709 39.637 1.00 66.48 O
ATOM 26 OP2 A B 430 51.571 127.785 38.533 1.00 62.69 O
ATOM 27 O5' A B 430 53.367 129.390 37.836 1.00 64.97 O
TER

Atoms:
OP1: (61.237,132.902,39.497)
OP2: (63.337,131.432,39.224)
C3': (59.928,127.904,40.136)
C1': (58.083,128.326,38.716)
C5': (60.322,130.361,40.570)
O4': (58.358,129.518,39.436)
C8: (59.374,129.495,36.859)
O2': (57.833,126.621,40.371)
C6: (58.503,127.862,33.881)
C5: (58.763,128.399,35.148)
C4: (58.150,127.790,36.230)
P: (61.905,131.696,38.924)
C4': (59.313,129.243,40.500)
C2': (58.766,127.176,39.461)
C2: (57.175,126.298,34.944)
N1: (57.690,126.787,33.811)
N3: (57.336,126.720,36.195)
N6: (59.011,128.360,32.751)
N7: (59.539,129.469,35.562)
N9: (58.527,128.522,37.333)
O5': (61.091,130.397,39.352)
O3': (60.440,127.261,41.303)
OP1: (54.363,121.194,39.906)
OP2: (53.272,120.392,37.724)
C3': (53.499,125.565,37.546)
C1': (53.620,124.688,35.342)
C5': (55.133,123.701,38.175)
O4': (54.907,124.559,35.923)
C8: (53.298,122.166,35.157)
O2': (51.528,125.679,36.059)
C6: (52.309,121.574,31.845)
C5: (52.719,121.967,33.125)
C4: (52.959,123.316,33.321)
P: (54.285,121.217,38.423)
C4': (54.862,124.923,37.332)
C2': (52.629,124.899,36.484)
C2: (52.463,123.798,31.238)
N1: (52.190,122.534,30.903)
N3: (52.849,124.295,32.408)
N6: (52.031,120.312,31.513)
N7: (52.941,121.251,34.294)
N9: (53.315,123.443,34.639)
O5': (54.099,122.726,37.964)
O3': (53.590,126.954,37.327)
Image (generated by PyMOL):
PyMOL image
show in jmol