ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0293:0315

Extra

PDB:
ATOM 1 O3' G A 292 17.691 136.830 19.205 1.00 59.36 O
ATOM 2 P A A 293 16.816 137.758 20.187 1.00 60.81 P
ATOM 3 OP1 A A 293 16.630 139.074 19.536 1.00 60.81 O
ATOM 4 OP2 A A 293 17.392 137.700 21.557 1.00 63.43 O
ATOM 5 O5' A A 293 15.400 137.023 20.218 1.00 60.69 O
ATOM 6 C5' A A 293 14.842 136.429 19.027 1.00 58.63 C
ATOM 7 C4' A A 293 13.972 135.248 19.388 1.00 57.82 C
ATOM 8 O4' A A 293 14.789 134.193 19.950 1.00 58.08 O
ATOM 9 C3' A A 293 12.919 135.534 20.443 1.00 57.76 C
ATOM 10 O3' A A 293 11.753 136.060 19.821 1.00 56.02 O
ATOM 11 C2' A A 293 12.678 134.161 21.060 1.00 57.84 C
ATOM 12 O2' A A 293 11.788 133.365 20.306 1.00 60.50 O
ATOM 13 C1' A A 293 14.073 133.535 20.979 1.00 58.60 C
ATOM 14 N9 A A 293 14.870 133.596 22.205 1.00 59.85 N
ATOM 15 C8 A A 293 15.565 134.667 22.713 1.00 60.14 C
ATOM 16 N7 A A 293 16.212 134.401 23.820 1.00 60.79 N
ATOM 17 C5 A A 293 15.919 133.067 24.065 1.00 61.12 C
ATOM 18 C6 A A 293 16.307 132.183 25.093 1.00 60.67 C
ATOM 19 N6 A A 293 17.112 132.524 26.099 1.00 59.86 N
ATOM 20 N1 A A 293 15.835 130.920 25.045 1.00 60.71 N
ATOM 21 C2 A A 293 15.035 130.574 24.028 1.00 60.80 C
ATOM 22 N3 A A 293 14.608 131.307 23.003 1.00 59.89 N
ATOM 23 C4 A A 293 15.090 132.559 23.081 1.00 59.97 C
ATOM 24 P A A 294 11.174 137.484 20.276 1.00 56.90 P
ATOM 25 OP1 A A 294 10.291 137.976 19.191 1.00 58.08 O
ATOM 26 OP2 A A 294 12.307 138.329 20.736 1.00 58.18 O
ATOM 27 O5' A A 294 10.249 137.128 21.520 1.00 56.22 O
TER

ATOM 1 O3' G B 314 10.020 130.211 20.487 1.00 50.16 O
ATOM 2 P A B 315 10.321 128.754 19.871 1.00 52.94 P
ATOM 3 OP1 A B 315 10.962 128.944 18.546 1.00 51.34 O
ATOM 4 OP2 A B 315 9.085 127.934 19.980 1.00 53.55 O
ATOM 5 O5' A B 315 11.410 128.110 20.839 1.00 52.40 O
ATOM 6 C5' A B 315 12.770 128.578 20.861 1.00 49.93 C
ATOM 7 C4' A B 315 13.548 127.820 21.907 1.00 49.65 C
ATOM 8 O4' A B 315 12.949 128.063 23.211 1.00 49.03 O
ATOM 9 C3' A B 315 13.505 126.309 21.758 1.00 46.58 C
ATOM 10 O3' A B 315 14.492 125.851 20.844 1.00 46.91 O
ATOM 11 C2' A B 315 13.787 125.838 23.181 1.00 47.13 C
ATOM 12 O2' A B 315 15.156 125.878 23.536 1.00 44.26 O
ATOM 13 C1' A B 315 13.034 126.889 23.999 1.00 47.82 C
ATOM 14 N9 A B 315 11.679 126.474 24.368 1.00 50.40 N
ATOM 15 C8 A B 315 10.492 126.781 23.750 1.00 50.48 C
ATOM 16 N7 A B 315 9.442 126.248 24.328 1.00 51.04 N
ATOM 17 C5 A B 315 9.972 125.539 25.396 1.00 50.19 C
ATOM 18 C6 A B 315 9.379 124.747 26.395 1.00 50.61 C
ATOM 19 N6 A B 315 8.070 124.518 26.481 1.00 49.01 N
ATOM 20 N1 A B 315 10.192 124.186 27.316 1.00 51.49 N
ATOM 21 C2 A B 315 11.508 124.407 27.228 1.00 50.37 C
ATOM 22 N3 A B 315 12.183 125.126 26.336 1.00 50.11 N
ATOM 23 C4 A B 315 11.347 125.673 25.437 1.00 49.86 C
ATOM 24 P U B 316 14.056 125.252 19.412 1.00 47.12 P
ATOM 25 OP1 U B 316 14.169 126.357 18.425 1.00 47.79 O
ATOM 26 OP2 U B 316 12.766 124.525 19.542 1.00 46.72 O
ATOM 27 O5' U B 316 15.211 124.202 19.112 1.00 45.28 O
TER

Atoms:
OP1: (16.630,139.074,19.536)
OP2: (17.392,137.700,21.557)
C3': (12.919,135.534,20.443)
C1': (14.073,133.535,20.979)
C5': (14.842,136.429,19.027)
O4': (14.789,134.193,19.950)
C8: (15.565,134.667,22.713)
O2': (11.788,133.365,20.306)
C6: (16.307,132.183,25.093)
C5: (15.919,133.067,24.065)
C4: (15.090,132.559,23.081)
P: (16.816,137.758,20.187)
C4': (13.972,135.248,19.388)
C2': (12.678,134.161,21.060)
C2: (15.035,130.574,24.028)
N1: (15.835,130.920,25.045)
N3: (14.608,131.307,23.003)
N6: (17.112,132.524,26.099)
N7: (16.212,134.401,23.820)
N9: (14.870,133.596,22.205)
O5': (15.400,137.023,20.218)
O3': (11.753,136.060,19.821)
OP1: (10.962,128.944,18.546)
OP2: (9.085,127.934,19.980)
C3': (13.505,126.309,21.758)
C1': (13.034,126.889,23.999)
C5': (12.770,128.578,20.861)
O4': (12.949,128.063,23.211)
C8: (10.492,126.781,23.750)
O2': (15.156,125.878,23.536)
C6: (9.379,124.747,26.395)
C5: (9.972,125.539,25.396)
C4: (11.347,125.673,25.437)
P: (10.321,128.754,19.871)
C4': (13.548,127.820,21.907)
C2': (13.787,125.838,23.181)
C2: (11.508,124.407,27.228)
N1: (10.192,124.186,27.316)
N3: (12.183,125.126,26.336)
N6: (8.070,124.518,26.481)
N7: (9.442,126.248,24.328)
N9: (11.679,126.474,24.368)
O5': (11.410,128.110,20.839)
O3': (14.492,125.851,20.844)
Image (generated by PyMOL):
PyMOL image
show in jmol