Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11741:11478
Extra
PDB:
ATOM 1 O3' G A1740 7.537 18.040 125.863 1.00 52.99 O
ATOM 2 P A A1741 7.673 17.545 127.417 1.00 59.94 P
ATOM 3 OP1 A A1741 7.031 16.218 127.541 1.00 59.81 O
ATOM 4 OP2 A A1741 7.167 18.641 128.288 1.00 60.55 O
ATOM 5 O5' A A1741 9.240 17.369 127.592 1.00 59.78 O
ATOM 6 C5' A A1741 9.741 16.824 128.795 1.00 60.08 C
ATOM 7 C4' A A1741 10.707 15.700 128.565 1.00 59.67 C
ATOM 8 O4' A A1741 11.775 16.148 127.698 1.00 59.31 O
ATOM 9 C3' A A1741 11.435 15.243 129.805 1.00 59.99 C
ATOM 10 O3' A A1741 10.688 14.383 130.621 1.00 60.23 O
ATOM 11 C2' A A1741 12.722 14.647 129.279 1.00 59.55 C
ATOM 12 O2' A A1741 12.526 13.320 128.867 1.00 59.17 O
ATOM 13 C1' A A1741 12.974 15.500 128.047 1.00 59.20 C
ATOM 14 N9 A A1741 14.030 16.505 128.250 1.00 59.37 N
ATOM 15 C8 A A1741 13.944 17.873 128.162 1.00 59.61 C
ATOM 16 N7 A A1741 15.105 18.464 128.337 1.00 59.69 N
ATOM 17 C5 A A1741 16.013 17.437 128.528 1.00 59.48 C
ATOM 18 C6 A A1741 17.400 17.411 128.748 1.00 59.45 C
ATOM 19 N6 A A1741 18.132 18.507 128.812 1.00 59.63 N
ATOM 20 N1 A A1741 18.015 16.218 128.919 1.00 59.24 N
ATOM 21 C2 A A1741 17.289 15.098 128.846 1.00 59.06 C
ATOM 22 N3 A A1741 15.976 14.992 128.632 1.00 59.06 N
ATOM 23 C4 A A1741 15.374 16.211 128.475 1.00 59.28 C
ATOM 24 P A A1742 10.761 14.593 132.202 1.00 49.25 P
ATOM 25 OP1 A A1742 9.707 13.745 132.846 1.00 49.48 O
ATOM 26 OP2 A A1742 10.743 16.056 132.427 1.00 49.62 O
ATOM 27 O5' A A1742 12.199 14.029 132.560 1.00 49.15 O
TER
ATOM 1 O3' U B1477 20.104 10.391 132.638 1.00 52.76 O
ATOM 2 P A B1478 20.312 9.374 131.428 1.00 49.74 P
ATOM 3 OP1 A B1478 19.286 8.345 131.559 1.00 49.71 O
ATOM 4 OP2 A B1478 21.731 8.962 131.457 1.00 49.62 O
ATOM 5 O5' A B1478 20.015 10.277 130.142 1.00 49.37 O
ATOM 6 C5' A B1478 18.753 10.911 129.997 1.00 49.50 C
ATOM 7 C4' A B1478 18.476 11.373 128.582 1.00 49.03 C
ATOM 8 O4' A B1478 19.163 12.618 128.301 1.00 49.07 O
ATOM 9 C3' A B1478 18.901 10.459 127.474 1.00 48.43 C
ATOM 10 O3' A B1478 17.997 9.400 127.287 1.00 48.27 O
ATOM 11 C2' A B1478 18.985 11.407 126.279 1.00 48.12 C
ATOM 12 O2' A B1478 17.709 11.635 125.727 1.00 48.05 O
ATOM 13 C1' A B1478 19.441 12.705 126.928 1.00 48.54 C
ATOM 14 N9 A B1478 20.888 12.985 126.758 1.00 48.43 N
ATOM 15 C8 A B1478 21.870 12.659 127.643 1.00 48.66 C
ATOM 16 N7 A B1478 23.047 13.077 127.299 1.00 48.53 N
ATOM 17 C5 A B1478 22.834 13.751 126.121 1.00 48.20 C
ATOM 18 C6 A B1478 23.712 14.434 125.284 1.00 47.96 C
ATOM 19 N6 A B1478 24.994 14.547 125.563 1.00 48.02 N
ATOM 20 N1 A B1478 23.250 15.012 124.175 1.00 47.68 N
ATOM 21 C2 A B1478 21.945 14.885 123.949 1.00 47.65 C
ATOM 22 N3 A B1478 21.007 14.274 124.662 1.00 47.86 N
ATOM 23 C4 A B1478 21.521 13.718 125.770 1.00 48.14 C
ATOM 24 P A B1479 18.506 7.884 127.305 1.00 52.24 P
ATOM 25 OP1 A B1479 17.514 7.099 128.042 1.00 52.49 O
ATOM 26 OP2 A B1479 19.907 7.895 127.814 1.00 52.34 O
ATOM 27 O5' A B1479 18.494 7.479 125.757 1.00 51.61 O
TER
ATOM 2 P A A1741 7.673 17.545 127.417 1.00 59.94 P
ATOM 3 OP1 A A1741 7.031 16.218 127.541 1.00 59.81 O
ATOM 4 OP2 A A1741 7.167 18.641 128.288 1.00 60.55 O
ATOM 5 O5' A A1741 9.240 17.369 127.592 1.00 59.78 O
ATOM 6 C5' A A1741 9.741 16.824 128.795 1.00 60.08 C
ATOM 7 C4' A A1741 10.707 15.700 128.565 1.00 59.67 C
ATOM 8 O4' A A1741 11.775 16.148 127.698 1.00 59.31 O
ATOM 9 C3' A A1741 11.435 15.243 129.805 1.00 59.99 C
ATOM 10 O3' A A1741 10.688 14.383 130.621 1.00 60.23 O
ATOM 11 C2' A A1741 12.722 14.647 129.279 1.00 59.55 C
ATOM 12 O2' A A1741 12.526 13.320 128.867 1.00 59.17 O
ATOM 13 C1' A A1741 12.974 15.500 128.047 1.00 59.20 C
ATOM 14 N9 A A1741 14.030 16.505 128.250 1.00 59.37 N
ATOM 15 C8 A A1741 13.944 17.873 128.162 1.00 59.61 C
ATOM 16 N7 A A1741 15.105 18.464 128.337 1.00 59.69 N
ATOM 17 C5 A A1741 16.013 17.437 128.528 1.00 59.48 C
ATOM 18 C6 A A1741 17.400 17.411 128.748 1.00 59.45 C
ATOM 19 N6 A A1741 18.132 18.507 128.812 1.00 59.63 N
ATOM 20 N1 A A1741 18.015 16.218 128.919 1.00 59.24 N
ATOM 21 C2 A A1741 17.289 15.098 128.846 1.00 59.06 C
ATOM 22 N3 A A1741 15.976 14.992 128.632 1.00 59.06 N
ATOM 23 C4 A A1741 15.374 16.211 128.475 1.00 59.28 C
ATOM 24 P A A1742 10.761 14.593 132.202 1.00 49.25 P
ATOM 25 OP1 A A1742 9.707 13.745 132.846 1.00 49.48 O
ATOM 26 OP2 A A1742 10.743 16.056 132.427 1.00 49.62 O
ATOM 27 O5' A A1742 12.199 14.029 132.560 1.00 49.15 O
TER
ATOM 1 O3' U B1477 20.104 10.391 132.638 1.00 52.76 O
ATOM 2 P A B1478 20.312 9.374 131.428 1.00 49.74 P
ATOM 3 OP1 A B1478 19.286 8.345 131.559 1.00 49.71 O
ATOM 4 OP2 A B1478 21.731 8.962 131.457 1.00 49.62 O
ATOM 5 O5' A B1478 20.015 10.277 130.142 1.00 49.37 O
ATOM 6 C5' A B1478 18.753 10.911 129.997 1.00 49.50 C
ATOM 7 C4' A B1478 18.476 11.373 128.582 1.00 49.03 C
ATOM 8 O4' A B1478 19.163 12.618 128.301 1.00 49.07 O
ATOM 9 C3' A B1478 18.901 10.459 127.474 1.00 48.43 C
ATOM 10 O3' A B1478 17.997 9.400 127.287 1.00 48.27 O
ATOM 11 C2' A B1478 18.985 11.407 126.279 1.00 48.12 C
ATOM 12 O2' A B1478 17.709 11.635 125.727 1.00 48.05 O
ATOM 13 C1' A B1478 19.441 12.705 126.928 1.00 48.54 C
ATOM 14 N9 A B1478 20.888 12.985 126.758 1.00 48.43 N
ATOM 15 C8 A B1478 21.870 12.659 127.643 1.00 48.66 C
ATOM 16 N7 A B1478 23.047 13.077 127.299 1.00 48.53 N
ATOM 17 C5 A B1478 22.834 13.751 126.121 1.00 48.20 C
ATOM 18 C6 A B1478 23.712 14.434 125.284 1.00 47.96 C
ATOM 19 N6 A B1478 24.994 14.547 125.563 1.00 48.02 N
ATOM 20 N1 A B1478 23.250 15.012 124.175 1.00 47.68 N
ATOM 21 C2 A B1478 21.945 14.885 123.949 1.00 47.65 C
ATOM 22 N3 A B1478 21.007 14.274 124.662 1.00 47.86 N
ATOM 23 C4 A B1478 21.521 13.718 125.770 1.00 48.14 C
ATOM 24 P A B1479 18.506 7.884 127.305 1.00 52.24 P
ATOM 25 OP1 A B1479 17.514 7.099 128.042 1.00 52.49 O
ATOM 26 OP2 A B1479 19.907 7.895 127.814 1.00 52.34 O
ATOM 27 O5' A B1479 18.494 7.479 125.757 1.00 51.61 O
TER
Atoms:
OP1: (7.031,16.218,127.541)
OP2: (7.167,18.641,128.288)
C3': (11.435,15.243,129.805)
C1': (12.974,15.500,128.047)
C5': (9.741,16.824,128.795)
O4': (11.775,16.148,127.698)
C8: (13.944,17.873,128.162)
O2': (12.526,13.320,128.867)
C6: (17.400,17.411,128.748)
C5: (16.013,17.437,128.528)
C4: (15.374,16.211,128.475)
P: (7.673,17.545,127.417)
C4': (10.707,15.700,128.565)
C2': (12.722,14.647,129.279)
C2: (17.289,15.098,128.846)
N1: (18.015,16.218,128.919)
N3: (15.976,14.992,128.632)
N6: (18.132,18.507,128.812)
N7: (15.105,18.464,128.337)
N9: (14.030,16.505,128.250)
O5': (9.240,17.369,127.592)
O3': (10.688,14.383,130.621)
OP2: (7.167,18.641,128.288)
C3': (11.435,15.243,129.805)
C1': (12.974,15.500,128.047)
C5': (9.741,16.824,128.795)
O4': (11.775,16.148,127.698)
C8: (13.944,17.873,128.162)
O2': (12.526,13.320,128.867)
C6: (17.400,17.411,128.748)
C5: (16.013,17.437,128.528)
C4: (15.374,16.211,128.475)
P: (7.673,17.545,127.417)
C4': (10.707,15.700,128.565)
C2': (12.722,14.647,129.279)
C2: (17.289,15.098,128.846)
N1: (18.015,16.218,128.919)
N3: (15.976,14.992,128.632)
N6: (18.132,18.507,128.812)
N7: (15.105,18.464,128.337)
N9: (14.030,16.505,128.250)
O5': (9.240,17.369,127.592)
O3': (10.688,14.383,130.621)
OP1: (19.286,8.345,131.559)
OP2: (21.731,8.962,131.457)
C3': (18.901,10.459,127.474)
C1': (19.441,12.705,126.928)
C5': (18.753,10.911,129.997)
O4': (19.163,12.618,128.301)
C8: (21.870,12.659,127.643)
O2': (17.709,11.635,125.727)
C6: (23.712,14.434,125.284)
C5: (22.834,13.751,126.121)
C4: (21.521,13.718,125.770)
P: (20.312,9.374,131.428)
C4': (18.476,11.373,128.582)
C2': (18.985,11.407,126.279)
C2: (21.945,14.885,123.949)
N1: (23.250,15.012,124.175)
N3: (21.007,14.274,124.662)
N6: (24.994,14.547,125.563)
N7: (23.047,13.077,127.299)
N9: (20.888,12.985,126.758)
O5': (20.015,10.277,130.142)
O3': (17.997,9.400,127.287)
OP2: (21.731,8.962,131.457)
C3': (18.901,10.459,127.474)
C1': (19.441,12.705,126.928)
C5': (18.753,10.911,129.997)
O4': (19.163,12.618,128.301)
C8: (21.870,12.659,127.643)
O2': (17.709,11.635,125.727)
C6: (23.712,14.434,125.284)
C5: (22.834,13.751,126.121)
C4: (21.521,13.718,125.770)
P: (20.312,9.374,131.428)
C4': (18.476,11.373,128.582)
C2': (18.985,11.407,126.279)
C2: (21.945,14.885,123.949)
N1: (23.250,15.012,124.175)
N3: (21.007,14.274,124.662)
N6: (24.994,14.547,125.563)
N7: (23.047,13.077,127.299)
N9: (20.888,12.985,126.758)
O5': (20.015,10.277,130.142)
O3': (17.997,9.400,127.287)
Image (generated by PyMOL):