Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1562:A1346
Extra
PDB:
ATOM 1 O3' G A1561 -30.215 -15.570 26.647 1.00 0.01 O
ATOM 2 P A A1562 -28.824 -15.671 27.447 1.00 0.01 P
ATOM 3 OP1 A A1562 -28.751 -14.519 28.354 1.00 0.01 O
ATOM 4 OP2 A A1562 -27.756 -15.858 26.453 1.00 0.01 O
ATOM 5 O5' A A1562 -29.013 -16.998 28.290 1.00 0.01 O
ATOM 6 C5' A A1562 -28.229 -17.255 29.444 1.00 0.01 C
ATOM 7 C4' A A1562 -28.981 -18.104 30.430 1.00 0.01 C
ATOM 8 O4' A A1562 -29.074 -19.448 29.934 1.00 0.01 O
ATOM 9 C3' A A1562 -28.348 -18.258 31.785 1.00 0.01 C
ATOM 10 O3' A A1562 -28.634 -17.175 32.629 1.00 0.01 O
ATOM 11 C2' A A1562 -28.909 -19.592 32.276 1.00 0.01 C
ATOM 12 O2' A A1562 -30.215 -19.458 32.797 1.00 0.01 O
ATOM 13 C1' A A1562 -29.004 -20.369 30.990 1.00 0.01 C
ATOM 14 N9 A A1562 -27.838 -21.227 30.782 1.00 0.01 N
ATOM 15 C8 A A1562 -26.834 -21.104 29.864 1.00 0.01 C
ATOM 16 N7 A A1562 -25.968 -22.073 29.965 1.00 0.01 N
ATOM 17 C5 A A1562 -26.447 -22.873 31.006 1.00 0.01 C
ATOM 18 C6 A A1562 -25.997 -24.059 31.601 1.00 0.01 C
ATOM 19 N6 A A1562 -24.900 -24.729 31.265 1.00 0.01 N
ATOM 20 N1 A A1562 -26.734 -24.560 32.596 1.00 0.01 N
ATOM 21 C2 A A1562 -27.852 -23.929 32.960 1.00 0.01 C
ATOM 22 N3 A A1562 -28.380 -22.820 32.477 1.00 0.01 N
ATOM 23 C4 A A1562 -27.607 -22.351 31.498 1.00 0.01 C
ATOM 24 P A A1563 -27.465 -16.434 33.378 1.00 0.01 P
ATOM 25 OP1 A A1563 -28.003 -15.172 33.870 1.00 0.01 O
ATOM 26 OP2 A A1563 -26.318 -16.407 32.472 1.00 0.01 O
ATOM 27 O5' A A1563 -27.180 -17.404 34.581 1.00 0.01 O
TER
ATOM 1 O3' U B1345 -28.102 -24.226 39.622 1.00 0.01 O
ATOM 2 P A B1346 -29.580 -24.807 39.597 1.00 0.01 P
ATOM 3 OP1 A B1346 -30.482 -23.747 40.045 1.00 0.01 O
ATOM 4 OP2 A B1346 -29.551 -26.045 40.352 1.00 0.01 O
ATOM 5 O5' A B1346 -29.812 -25.097 38.059 1.00 0.01 O
ATOM 6 C5' A B1346 -29.515 -24.126 37.084 1.00 0.01 C
ATOM 7 C4' A B1346 -30.306 -24.348 35.810 1.00 0.01 C
ATOM 8 O4' A B1346 -29.614 -25.257 34.933 1.00 0.01 O
ATOM 9 C3' A B1346 -31.679 -24.960 35.960 1.00 0.01 C
ATOM 10 O3' A B1346 -32.629 -24.009 36.299 1.00 0.01 O
ATOM 11 C2' A B1346 -31.930 -25.517 34.594 1.00 0.01 C
ATOM 12 O2' A B1346 -32.308 -24.469 33.736 1.00 0.01 O
ATOM 13 C1' A B1346 -30.547 -25.998 34.190 1.00 0.01 C
ATOM 14 N9 A B1346 -30.341 -27.423 34.485 1.00 0.01 N
ATOM 15 C8 A B1346 -29.975 -27.903 35.693 1.00 0.01 C
ATOM 16 N7 A B1346 -29.822 -29.191 35.731 1.00 0.01 N
ATOM 17 C5 A B1346 -30.108 -29.600 34.462 1.00 0.01 C
ATOM 18 C6 A B1346 -30.104 -30.857 33.912 1.00 0.01 C
ATOM 19 N6 A B1346 -29.803 -31.914 34.617 1.00 0.01 N
ATOM 20 N1 A B1346 -30.386 -31.000 32.641 1.00 0.01 N
ATOM 21 C2 A B1346 -30.672 -29.897 31.978 1.00 0.01 C
ATOM 22 N3 A B1346 -30.729 -28.616 32.380 1.00 0.01 N
ATOM 23 C4 A B1346 -30.419 -28.530 33.673 1.00 0.01 C
ATOM 24 P A B1347 -33.897 -24.419 37.144 1.00 0.01 P
ATOM 25 OP1 A B1347 -34.654 -23.180 37.422 1.00 0.01 O
ATOM 26 OP2 A B1347 -33.405 -25.237 38.278 1.00 0.01 O
ATOM 27 O5' A B1347 -34.702 -25.325 36.150 1.00 0.01 O
TER
ATOM 2 P A A1562 -28.824 -15.671 27.447 1.00 0.01 P
ATOM 3 OP1 A A1562 -28.751 -14.519 28.354 1.00 0.01 O
ATOM 4 OP2 A A1562 -27.756 -15.858 26.453 1.00 0.01 O
ATOM 5 O5' A A1562 -29.013 -16.998 28.290 1.00 0.01 O
ATOM 6 C5' A A1562 -28.229 -17.255 29.444 1.00 0.01 C
ATOM 7 C4' A A1562 -28.981 -18.104 30.430 1.00 0.01 C
ATOM 8 O4' A A1562 -29.074 -19.448 29.934 1.00 0.01 O
ATOM 9 C3' A A1562 -28.348 -18.258 31.785 1.00 0.01 C
ATOM 10 O3' A A1562 -28.634 -17.175 32.629 1.00 0.01 O
ATOM 11 C2' A A1562 -28.909 -19.592 32.276 1.00 0.01 C
ATOM 12 O2' A A1562 -30.215 -19.458 32.797 1.00 0.01 O
ATOM 13 C1' A A1562 -29.004 -20.369 30.990 1.00 0.01 C
ATOM 14 N9 A A1562 -27.838 -21.227 30.782 1.00 0.01 N
ATOM 15 C8 A A1562 -26.834 -21.104 29.864 1.00 0.01 C
ATOM 16 N7 A A1562 -25.968 -22.073 29.965 1.00 0.01 N
ATOM 17 C5 A A1562 -26.447 -22.873 31.006 1.00 0.01 C
ATOM 18 C6 A A1562 -25.997 -24.059 31.601 1.00 0.01 C
ATOM 19 N6 A A1562 -24.900 -24.729 31.265 1.00 0.01 N
ATOM 20 N1 A A1562 -26.734 -24.560 32.596 1.00 0.01 N
ATOM 21 C2 A A1562 -27.852 -23.929 32.960 1.00 0.01 C
ATOM 22 N3 A A1562 -28.380 -22.820 32.477 1.00 0.01 N
ATOM 23 C4 A A1562 -27.607 -22.351 31.498 1.00 0.01 C
ATOM 24 P A A1563 -27.465 -16.434 33.378 1.00 0.01 P
ATOM 25 OP1 A A1563 -28.003 -15.172 33.870 1.00 0.01 O
ATOM 26 OP2 A A1563 -26.318 -16.407 32.472 1.00 0.01 O
ATOM 27 O5' A A1563 -27.180 -17.404 34.581 1.00 0.01 O
TER
ATOM 1 O3' U B1345 -28.102 -24.226 39.622 1.00 0.01 O
ATOM 2 P A B1346 -29.580 -24.807 39.597 1.00 0.01 P
ATOM 3 OP1 A B1346 -30.482 -23.747 40.045 1.00 0.01 O
ATOM 4 OP2 A B1346 -29.551 -26.045 40.352 1.00 0.01 O
ATOM 5 O5' A B1346 -29.812 -25.097 38.059 1.00 0.01 O
ATOM 6 C5' A B1346 -29.515 -24.126 37.084 1.00 0.01 C
ATOM 7 C4' A B1346 -30.306 -24.348 35.810 1.00 0.01 C
ATOM 8 O4' A B1346 -29.614 -25.257 34.933 1.00 0.01 O
ATOM 9 C3' A B1346 -31.679 -24.960 35.960 1.00 0.01 C
ATOM 10 O3' A B1346 -32.629 -24.009 36.299 1.00 0.01 O
ATOM 11 C2' A B1346 -31.930 -25.517 34.594 1.00 0.01 C
ATOM 12 O2' A B1346 -32.308 -24.469 33.736 1.00 0.01 O
ATOM 13 C1' A B1346 -30.547 -25.998 34.190 1.00 0.01 C
ATOM 14 N9 A B1346 -30.341 -27.423 34.485 1.00 0.01 N
ATOM 15 C8 A B1346 -29.975 -27.903 35.693 1.00 0.01 C
ATOM 16 N7 A B1346 -29.822 -29.191 35.731 1.00 0.01 N
ATOM 17 C5 A B1346 -30.108 -29.600 34.462 1.00 0.01 C
ATOM 18 C6 A B1346 -30.104 -30.857 33.912 1.00 0.01 C
ATOM 19 N6 A B1346 -29.803 -31.914 34.617 1.00 0.01 N
ATOM 20 N1 A B1346 -30.386 -31.000 32.641 1.00 0.01 N
ATOM 21 C2 A B1346 -30.672 -29.897 31.978 1.00 0.01 C
ATOM 22 N3 A B1346 -30.729 -28.616 32.380 1.00 0.01 N
ATOM 23 C4 A B1346 -30.419 -28.530 33.673 1.00 0.01 C
ATOM 24 P A B1347 -33.897 -24.419 37.144 1.00 0.01 P
ATOM 25 OP1 A B1347 -34.654 -23.180 37.422 1.00 0.01 O
ATOM 26 OP2 A B1347 -33.405 -25.237 38.278 1.00 0.01 O
ATOM 27 O5' A B1347 -34.702 -25.325 36.150 1.00 0.01 O
TER
Atoms:
OP1: (-28.751,-14.519,28.354)
OP2: (-27.756,-15.858,26.453)
C3': (-28.348,-18.258,31.785)
C1': (-29.004,-20.369,30.990)
C5': (-28.229,-17.255,29.444)
O4': (-29.074,-19.448,29.934)
C8: (-26.834,-21.104,29.864)
O2': (-30.215,-19.458,32.797)
C6: (-25.997,-24.059,31.601)
C5: (-26.447,-22.873,31.006)
C4: (-27.607,-22.351,31.498)
P: (-28.824,-15.671,27.447)
C4': (-28.981,-18.104,30.430)
C2': (-28.909,-19.592,32.276)
C2: (-27.852,-23.929,32.960)
N1: (-26.734,-24.560,32.596)
N3: (-28.380,-22.820,32.477)
N6: (-24.900,-24.729,31.265)
N7: (-25.968,-22.073,29.965)
N9: (-27.838,-21.227,30.782)
O5': (-29.013,-16.998,28.290)
O3': (-28.634,-17.175,32.629)
OP2: (-27.756,-15.858,26.453)
C3': (-28.348,-18.258,31.785)
C1': (-29.004,-20.369,30.990)
C5': (-28.229,-17.255,29.444)
O4': (-29.074,-19.448,29.934)
C8: (-26.834,-21.104,29.864)
O2': (-30.215,-19.458,32.797)
C6: (-25.997,-24.059,31.601)
C5: (-26.447,-22.873,31.006)
C4: (-27.607,-22.351,31.498)
P: (-28.824,-15.671,27.447)
C4': (-28.981,-18.104,30.430)
C2': (-28.909,-19.592,32.276)
C2: (-27.852,-23.929,32.960)
N1: (-26.734,-24.560,32.596)
N3: (-28.380,-22.820,32.477)
N6: (-24.900,-24.729,31.265)
N7: (-25.968,-22.073,29.965)
N9: (-27.838,-21.227,30.782)
O5': (-29.013,-16.998,28.290)
O3': (-28.634,-17.175,32.629)
OP1: (-30.482,-23.747,40.045)
OP2: (-29.551,-26.045,40.352)
C3': (-31.679,-24.960,35.960)
C1': (-30.547,-25.998,34.190)
C5': (-29.515,-24.126,37.084)
O4': (-29.614,-25.257,34.933)
C8: (-29.975,-27.903,35.693)
O2': (-32.308,-24.469,33.736)
C6: (-30.104,-30.857,33.912)
C5: (-30.108,-29.600,34.462)
C4: (-30.419,-28.530,33.673)
P: (-29.580,-24.807,39.597)
C4': (-30.306,-24.348,35.810)
C2': (-31.930,-25.517,34.594)
C2: (-30.672,-29.897,31.978)
N1: (-30.386,-31.000,32.641)
N3: (-30.729,-28.616,32.380)
N6: (-29.803,-31.914,34.617)
N7: (-29.822,-29.191,35.731)
N9: (-30.341,-27.423,34.485)
O5': (-29.812,-25.097,38.059)
O3': (-32.629,-24.009,36.299)
OP2: (-29.551,-26.045,40.352)
C3': (-31.679,-24.960,35.960)
C1': (-30.547,-25.998,34.190)
C5': (-29.515,-24.126,37.084)
O4': (-29.614,-25.257,34.933)
C8: (-29.975,-27.903,35.693)
O2': (-32.308,-24.469,33.736)
C6: (-30.104,-30.857,33.912)
C5: (-30.108,-29.600,34.462)
C4: (-30.419,-28.530,33.673)
P: (-29.580,-24.807,39.597)
C4': (-30.306,-24.348,35.810)
C2': (-31.930,-25.517,34.594)
C2: (-30.672,-29.897,31.978)
N1: (-30.386,-31.000,32.641)
N3: (-30.729,-28.616,32.380)
N6: (-29.803,-31.914,34.617)
N7: (-29.822,-29.191,35.731)
N9: (-30.341,-27.423,34.485)
O5': (-29.812,-25.097,38.059)
O3': (-32.629,-24.009,36.299)
Image (generated by PyMOL):