Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1GID:B48:B122
Extra
PDB:
ATOM 1 O3' G A 47 59.727 75.070 41.185 1.00 49.91 O
ATOM 2 P A A 48 59.169 76.410 40.458 1.00 47.87 P
ATOM 3 OP1 A A 48 58.071 76.015 39.540 1.00 43.77 O
ATOM 4 OP2 A A 48 60.334 77.166 39.931 1.00 49.73 O
ATOM 5 O5' A A 48 58.553 77.289 41.634 1.00 42.33 O
ATOM 6 C5' A A 48 57.886 78.518 41.367 1.00 38.35 C
ATOM 7 C4' A A 48 56.495 78.481 41.953 1.00 36.06 C
ATOM 8 O4' A A 48 55.801 77.406 41.306 1.00 34.20 O
ATOM 9 C3' A A 48 56.461 78.076 43.414 1.00 37.13 C
ATOM 10 O3' A A 48 56.604 79.236 44.237 1.00 39.88 O
ATOM 11 C2' A A 48 55.086 77.432 43.567 1.00 35.65 C
ATOM 12 O2' A A 48 54.100 78.366 43.935 1.00 40.97 O
ATOM 13 C1' A A 48 54.807 76.904 42.158 1.00 29.91 C
ATOM 14 N9 A A 48 54.818 75.459 41.999 1.00 25.49 N
ATOM 15 C8 A A 48 55.653 74.771 41.171 1.00 26.93 C
ATOM 16 N7 A A 48 55.466 73.471 41.181 1.00 28.53 N
ATOM 17 C5 A A 48 54.436 73.298 42.084 1.00 28.68 C
ATOM 18 C6 A A 48 53.778 72.162 42.535 1.00 31.70 C
ATOM 19 N6 A A 48 54.084 70.934 42.136 1.00 33.15 N
ATOM 20 N1 A A 48 52.782 72.326 43.428 1.00 31.78 N
ATOM 21 C2 A A 48 52.489 73.566 43.842 1.00 32.54 C
ATOM 22 N3 A A 48 53.050 74.723 43.495 1.00 31.48 N
ATOM 23 C4 A A 48 54.025 74.517 42.599 1.00 28.70 C
ATOM 24 P A A 49 57.626 79.201 45.481 1.00 40.68 P
ATOM 25 OP1 A A 49 57.933 80.569 45.958 1.00 35.07 O
ATOM 26 OP2 A A 49 58.732 78.271 45.138 1.00 39.10 O
ATOM 27 O5' A A 49 56.789 78.459 46.603 1.00 41.70 O
TER
ATOM 1 O3' U B 121 49.902 75.435 49.032 1.00 25.97 O
ATOM 2 P A B 122 48.559 76.129 48.528 1.00 26.78 P
ATOM 3 OP1 A B 122 48.809 77.589 48.602 1.00 26.06 O
ATOM 4 OP2 A B 122 47.356 75.546 49.152 1.00 25.58 O
ATOM 5 O5' A B 122 48.471 75.633 47.036 1.00 22.45 O
ATOM 6 C5' A B 122 49.635 75.434 46.289 1.00 26.01 C
ATOM 7 C4' A B 122 49.326 74.576 45.109 1.00 27.80 C
ATOM 8 O4' A B 122 49.032 73.246 45.562 1.00 26.07 O
ATOM 9 C3' A B 122 48.127 75.001 44.261 1.00 28.16 C
ATOM 10 O3' A B 122 48.554 75.212 42.925 1.00 37.51 O
ATOM 11 C2' A B 122 47.205 73.778 44.307 1.00 26.18 C
ATOM 12 O2' A B 122 46.589 73.505 43.069 1.00 36.05 O
ATOM 13 C1' A B 122 48.194 72.657 44.626 1.00 22.91 C
ATOM 14 N9 A B 122 47.573 71.505 45.247 1.00 20.42 N
ATOM 15 C8 A B 122 47.062 71.447 46.509 1.00 26.50 C
ATOM 16 N7 A B 122 46.531 70.290 46.814 1.00 28.57 N
ATOM 17 C5 A B 122 46.713 69.538 45.674 1.00 22.14 C
ATOM 18 C6 A B 122 46.370 68.236 45.359 1.00 26.42 C
ATOM 19 N6 A B 122 45.750 67.412 46.207 1.00 29.84 N
ATOM 20 N1 A B 122 46.688 67.781 44.126 1.00 27.92 N
ATOM 21 C2 A B 122 47.317 68.602 43.285 1.00 26.78 C
ATOM 22 N3 A B 122 47.700 69.864 43.474 1.00 25.60 N
ATOM 23 C4 A B 122 47.362 70.272 44.702 1.00 20.13 C
ATOM 24 P A B 123 48.479 76.672 42.261 1.00 37.77 P
ATOM 25 OP1 A B 123 49.132 77.704 43.094 1.00 28.84 O
ATOM 26 OP2 A B 123 47.041 76.810 41.892 1.00 39.11 O
ATOM 27 O5' A B 123 49.347 76.503 40.929 1.00 34.08 O
TER
ATOM 2 P A A 48 59.169 76.410 40.458 1.00 47.87 P
ATOM 3 OP1 A A 48 58.071 76.015 39.540 1.00 43.77 O
ATOM 4 OP2 A A 48 60.334 77.166 39.931 1.00 49.73 O
ATOM 5 O5' A A 48 58.553 77.289 41.634 1.00 42.33 O
ATOM 6 C5' A A 48 57.886 78.518 41.367 1.00 38.35 C
ATOM 7 C4' A A 48 56.495 78.481 41.953 1.00 36.06 C
ATOM 8 O4' A A 48 55.801 77.406 41.306 1.00 34.20 O
ATOM 9 C3' A A 48 56.461 78.076 43.414 1.00 37.13 C
ATOM 10 O3' A A 48 56.604 79.236 44.237 1.00 39.88 O
ATOM 11 C2' A A 48 55.086 77.432 43.567 1.00 35.65 C
ATOM 12 O2' A A 48 54.100 78.366 43.935 1.00 40.97 O
ATOM 13 C1' A A 48 54.807 76.904 42.158 1.00 29.91 C
ATOM 14 N9 A A 48 54.818 75.459 41.999 1.00 25.49 N
ATOM 15 C8 A A 48 55.653 74.771 41.171 1.00 26.93 C
ATOM 16 N7 A A 48 55.466 73.471 41.181 1.00 28.53 N
ATOM 17 C5 A A 48 54.436 73.298 42.084 1.00 28.68 C
ATOM 18 C6 A A 48 53.778 72.162 42.535 1.00 31.70 C
ATOM 19 N6 A A 48 54.084 70.934 42.136 1.00 33.15 N
ATOM 20 N1 A A 48 52.782 72.326 43.428 1.00 31.78 N
ATOM 21 C2 A A 48 52.489 73.566 43.842 1.00 32.54 C
ATOM 22 N3 A A 48 53.050 74.723 43.495 1.00 31.48 N
ATOM 23 C4 A A 48 54.025 74.517 42.599 1.00 28.70 C
ATOM 24 P A A 49 57.626 79.201 45.481 1.00 40.68 P
ATOM 25 OP1 A A 49 57.933 80.569 45.958 1.00 35.07 O
ATOM 26 OP2 A A 49 58.732 78.271 45.138 1.00 39.10 O
ATOM 27 O5' A A 49 56.789 78.459 46.603 1.00 41.70 O
TER
ATOM 1 O3' U B 121 49.902 75.435 49.032 1.00 25.97 O
ATOM 2 P A B 122 48.559 76.129 48.528 1.00 26.78 P
ATOM 3 OP1 A B 122 48.809 77.589 48.602 1.00 26.06 O
ATOM 4 OP2 A B 122 47.356 75.546 49.152 1.00 25.58 O
ATOM 5 O5' A B 122 48.471 75.633 47.036 1.00 22.45 O
ATOM 6 C5' A B 122 49.635 75.434 46.289 1.00 26.01 C
ATOM 7 C4' A B 122 49.326 74.576 45.109 1.00 27.80 C
ATOM 8 O4' A B 122 49.032 73.246 45.562 1.00 26.07 O
ATOM 9 C3' A B 122 48.127 75.001 44.261 1.00 28.16 C
ATOM 10 O3' A B 122 48.554 75.212 42.925 1.00 37.51 O
ATOM 11 C2' A B 122 47.205 73.778 44.307 1.00 26.18 C
ATOM 12 O2' A B 122 46.589 73.505 43.069 1.00 36.05 O
ATOM 13 C1' A B 122 48.194 72.657 44.626 1.00 22.91 C
ATOM 14 N9 A B 122 47.573 71.505 45.247 1.00 20.42 N
ATOM 15 C8 A B 122 47.062 71.447 46.509 1.00 26.50 C
ATOM 16 N7 A B 122 46.531 70.290 46.814 1.00 28.57 N
ATOM 17 C5 A B 122 46.713 69.538 45.674 1.00 22.14 C
ATOM 18 C6 A B 122 46.370 68.236 45.359 1.00 26.42 C
ATOM 19 N6 A B 122 45.750 67.412 46.207 1.00 29.84 N
ATOM 20 N1 A B 122 46.688 67.781 44.126 1.00 27.92 N
ATOM 21 C2 A B 122 47.317 68.602 43.285 1.00 26.78 C
ATOM 22 N3 A B 122 47.700 69.864 43.474 1.00 25.60 N
ATOM 23 C4 A B 122 47.362 70.272 44.702 1.00 20.13 C
ATOM 24 P A B 123 48.479 76.672 42.261 1.00 37.77 P
ATOM 25 OP1 A B 123 49.132 77.704 43.094 1.00 28.84 O
ATOM 26 OP2 A B 123 47.041 76.810 41.892 1.00 39.11 O
ATOM 27 O5' A B 123 49.347 76.503 40.929 1.00 34.08 O
TER
Atoms:
OP1: (58.071,76.015,39.540)
OP2: (60.334,77.166,39.931)
C3': (56.461,78.076,43.414)
C1': (54.807,76.904,42.158)
C5': (57.886,78.518,41.367)
O4': (55.801,77.406,41.306)
C8: (55.653,74.771,41.171)
O2': (54.100,78.366,43.935)
C6: (53.778,72.162,42.535)
C5: (54.436,73.298,42.084)
C4: (54.025,74.517,42.599)
P: (59.169,76.410,40.458)
C4': (56.495,78.481,41.953)
C2': (55.086,77.432,43.567)
C2: (52.489,73.566,43.842)
N1: (52.782,72.326,43.428)
N3: (53.050,74.723,43.495)
N6: (54.084,70.934,42.136)
N7: (55.466,73.471,41.181)
N9: (54.818,75.459,41.999)
O5': (58.553,77.289,41.634)
O3': (56.604,79.236,44.237)
OP2: (60.334,77.166,39.931)
C3': (56.461,78.076,43.414)
C1': (54.807,76.904,42.158)
C5': (57.886,78.518,41.367)
O4': (55.801,77.406,41.306)
C8: (55.653,74.771,41.171)
O2': (54.100,78.366,43.935)
C6: (53.778,72.162,42.535)
C5: (54.436,73.298,42.084)
C4: (54.025,74.517,42.599)
P: (59.169,76.410,40.458)
C4': (56.495,78.481,41.953)
C2': (55.086,77.432,43.567)
C2: (52.489,73.566,43.842)
N1: (52.782,72.326,43.428)
N3: (53.050,74.723,43.495)
N6: (54.084,70.934,42.136)
N7: (55.466,73.471,41.181)
N9: (54.818,75.459,41.999)
O5': (58.553,77.289,41.634)
O3': (56.604,79.236,44.237)
OP1: (48.809,77.589,48.602)
OP2: (47.356,75.546,49.152)
C3': (48.127,75.001,44.261)
C1': (48.194,72.657,44.626)
C5': (49.635,75.434,46.289)
O4': (49.032,73.246,45.562)
C8: (47.062,71.447,46.509)
O2': (46.589,73.505,43.069)
C6: (46.370,68.236,45.359)
C5: (46.713,69.538,45.674)
C4: (47.362,70.272,44.702)
P: (48.559,76.129,48.528)
C4': (49.326,74.576,45.109)
C2': (47.205,73.778,44.307)
C2: (47.317,68.602,43.285)
N1: (46.688,67.781,44.126)
N3: (47.700,69.864,43.474)
N6: (45.750,67.412,46.207)
N7: (46.531,70.290,46.814)
N9: (47.573,71.505,45.247)
O5': (48.471,75.633,47.036)
O3': (48.554,75.212,42.925)
OP2: (47.356,75.546,49.152)
C3': (48.127,75.001,44.261)
C1': (48.194,72.657,44.626)
C5': (49.635,75.434,46.289)
O4': (49.032,73.246,45.562)
C8: (47.062,71.447,46.509)
O2': (46.589,73.505,43.069)
C6: (46.370,68.236,45.359)
C5: (46.713,69.538,45.674)
C4: (47.362,70.272,44.702)
P: (48.559,76.129,48.528)
C4': (49.326,74.576,45.109)
C2': (47.205,73.778,44.307)
C2: (47.317,68.602,43.285)
N1: (46.688,67.781,44.126)
N3: (47.700,69.864,43.474)
N6: (45.750,67.412,46.207)
N7: (46.531,70.290,46.814)
N9: (47.573,71.505,45.247)
O5': (48.471,75.633,47.036)
O3': (48.554,75.212,42.925)
Image (generated by PyMOL):