Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:S57:S41
Extra
PDB:
ATOM 1 O3' G A 56 -1.997 -20.341 81.117 1.00 63.45 O
ATOM 2 P A A 57 -2.055 -18.769 81.419 1.00 64.60 P
ATOM 3 OP1 A A 57 -2.109 -18.083 80.106 1.00 64.69 O
ATOM 4 OP2 A A 57 -0.973 -18.423 82.374 1.00 64.28 O
ATOM 5 O5' A A 57 -3.462 -18.605 82.172 1.00 64.50 O
ATOM 6 C5' A A 57 -4.675 -18.741 81.431 1.00 64.90 C
ATOM 7 C4' A A 57 -5.861 -19.110 82.308 1.00 65.13 C
ATOM 8 O4' A A 57 -5.562 -20.271 83.128 1.00 64.70 O
ATOM 9 C3' A A 57 -6.288 -18.073 83.336 1.00 65.57 C
ATOM 10 O3' A A 57 -6.988 -16.978 82.743 1.00 66.65 O
ATOM 11 C2' A A 57 -7.155 -18.947 84.239 1.00 65.01 C
ATOM 12 O2' A A 57 -8.396 -19.304 83.661 1.00 65.19 O
ATOM 13 C1' A A 57 -6.259 -20.178 84.362 1.00 64.15 C
ATOM 14 N9 A A 57 -5.316 -20.082 85.481 1.00 63.07 N
ATOM 15 C8 A A 57 -3.989 -19.743 85.428 1.00 62.72 C
ATOM 16 N7 A A 57 -3.389 -19.729 86.595 1.00 62.19 N
ATOM 17 C5 A A 57 -4.391 -20.079 87.482 1.00 62.15 C
ATOM 18 C6 A A 57 -4.406 -20.246 88.885 1.00 62.03 C
ATOM 19 N6 A A 57 -3.327 -20.068 89.657 1.00 61.72 N
ATOM 20 N1 A A 57 -5.576 -20.603 89.468 1.00 62.04 N
ATOM 21 C2 A A 57 -6.659 -20.786 88.697 1.00 61.92 C
ATOM 22 N3 A A 57 -6.762 -20.656 87.372 1.00 62.36 N
ATOM 23 C4 A A 57 -5.586 -20.299 86.816 1.00 62.46 C
ATOM 24 P U A 58 -6.285 -15.536 82.668 1.00 67.77 P
ATOM 25 OP1 U A 58 -5.626 -15.424 81.347 1.00 67.92 O
ATOM 26 OP2 U A 58 -5.492 -15.320 83.899 1.00 67.93 O
ATOM 27 O5' U A 58 -7.520 -14.522 82.710 1.00 68.21 O
TER
ATOM 1 O3' U B 40 -4.284 -20.015 96.679 1.00 70.23 O
ATOM 2 P A B 41 -4.945 -20.496 95.303 1.00 69.60 P
ATOM 3 OP1 A B 41 -6.013 -21.464 95.644 1.00 69.52 O
ATOM 4 OP2 A B 41 -3.867 -20.896 94.369 1.00 69.63 O
ATOM 5 O5' A B 41 -5.627 -19.157 94.752 1.00 68.96 O
ATOM 6 C5' A B 41 -6.797 -18.630 95.373 1.00 67.56 C
ATOM 7 C4' A B 41 -7.861 -18.332 94.333 1.00 66.46 C
ATOM 8 O4' A B 41 -7.266 -17.573 93.253 1.00 66.19 O
ATOM 9 C3' A B 41 -8.518 -19.553 93.692 1.00 65.84 C
ATOM 10 O3' A B 41 -9.939 -19.402 93.734 1.00 65.43 O
ATOM 11 C2' A B 41 -7.969 -19.552 92.260 1.00 65.64 C
ATOM 12 O2' A B 41 -8.883 -20.073 91.316 1.00 65.53 O
ATOM 13 C1' A B 41 -7.755 -18.062 92.022 1.00 65.60 C
ATOM 14 N9 A B 41 -6.790 -17.714 90.979 1.00 65.00 N
ATOM 15 C8 A B 41 -5.452 -17.480 91.148 1.00 64.79 C
ATOM 16 N7 A B 41 -4.818 -17.177 90.042 1.00 64.63 N
ATOM 17 C5 A B 41 -5.807 -17.210 89.075 1.00 64.35 C
ATOM 18 C6 A B 41 -5.779 -16.977 87.683 1.00 64.19 C
ATOM 19 N6 A B 41 -4.665 -16.655 87.016 1.00 64.03 N
ATOM 20 N1 A B 41 -6.942 -17.092 87.004 1.00 64.23 N
ATOM 21 C2 A B 41 -8.058 -17.419 87.676 1.00 64.41 C
ATOM 22 N3 A B 41 -8.208 -17.656 88.983 1.00 64.28 N
ATOM 23 C4 A B 41 -7.034 -17.536 89.634 1.00 64.55 C
ATOM 24 P U B 42 -10.813 -19.948 94.964 1.00 65.35 P
ATOM 25 OP1 U B 42 -10.384 -19.283 96.215 1.00 65.09 O
ATOM 26 OP2 U B 42 -10.803 -21.426 94.887 1.00 65.30 O
ATOM 27 O5' U B 42 -12.281 -19.413 94.609 1.00 65.13 O
TER
ATOM 2 P A A 57 -2.055 -18.769 81.419 1.00 64.60 P
ATOM 3 OP1 A A 57 -2.109 -18.083 80.106 1.00 64.69 O
ATOM 4 OP2 A A 57 -0.973 -18.423 82.374 1.00 64.28 O
ATOM 5 O5' A A 57 -3.462 -18.605 82.172 1.00 64.50 O
ATOM 6 C5' A A 57 -4.675 -18.741 81.431 1.00 64.90 C
ATOM 7 C4' A A 57 -5.861 -19.110 82.308 1.00 65.13 C
ATOM 8 O4' A A 57 -5.562 -20.271 83.128 1.00 64.70 O
ATOM 9 C3' A A 57 -6.288 -18.073 83.336 1.00 65.57 C
ATOM 10 O3' A A 57 -6.988 -16.978 82.743 1.00 66.65 O
ATOM 11 C2' A A 57 -7.155 -18.947 84.239 1.00 65.01 C
ATOM 12 O2' A A 57 -8.396 -19.304 83.661 1.00 65.19 O
ATOM 13 C1' A A 57 -6.259 -20.178 84.362 1.00 64.15 C
ATOM 14 N9 A A 57 -5.316 -20.082 85.481 1.00 63.07 N
ATOM 15 C8 A A 57 -3.989 -19.743 85.428 1.00 62.72 C
ATOM 16 N7 A A 57 -3.389 -19.729 86.595 1.00 62.19 N
ATOM 17 C5 A A 57 -4.391 -20.079 87.482 1.00 62.15 C
ATOM 18 C6 A A 57 -4.406 -20.246 88.885 1.00 62.03 C
ATOM 19 N6 A A 57 -3.327 -20.068 89.657 1.00 61.72 N
ATOM 20 N1 A A 57 -5.576 -20.603 89.468 1.00 62.04 N
ATOM 21 C2 A A 57 -6.659 -20.786 88.697 1.00 61.92 C
ATOM 22 N3 A A 57 -6.762 -20.656 87.372 1.00 62.36 N
ATOM 23 C4 A A 57 -5.586 -20.299 86.816 1.00 62.46 C
ATOM 24 P U A 58 -6.285 -15.536 82.668 1.00 67.77 P
ATOM 25 OP1 U A 58 -5.626 -15.424 81.347 1.00 67.92 O
ATOM 26 OP2 U A 58 -5.492 -15.320 83.899 1.00 67.93 O
ATOM 27 O5' U A 58 -7.520 -14.522 82.710 1.00 68.21 O
TER
ATOM 1 O3' U B 40 -4.284 -20.015 96.679 1.00 70.23 O
ATOM 2 P A B 41 -4.945 -20.496 95.303 1.00 69.60 P
ATOM 3 OP1 A B 41 -6.013 -21.464 95.644 1.00 69.52 O
ATOM 4 OP2 A B 41 -3.867 -20.896 94.369 1.00 69.63 O
ATOM 5 O5' A B 41 -5.627 -19.157 94.752 1.00 68.96 O
ATOM 6 C5' A B 41 -6.797 -18.630 95.373 1.00 67.56 C
ATOM 7 C4' A B 41 -7.861 -18.332 94.333 1.00 66.46 C
ATOM 8 O4' A B 41 -7.266 -17.573 93.253 1.00 66.19 O
ATOM 9 C3' A B 41 -8.518 -19.553 93.692 1.00 65.84 C
ATOM 10 O3' A B 41 -9.939 -19.402 93.734 1.00 65.43 O
ATOM 11 C2' A B 41 -7.969 -19.552 92.260 1.00 65.64 C
ATOM 12 O2' A B 41 -8.883 -20.073 91.316 1.00 65.53 O
ATOM 13 C1' A B 41 -7.755 -18.062 92.022 1.00 65.60 C
ATOM 14 N9 A B 41 -6.790 -17.714 90.979 1.00 65.00 N
ATOM 15 C8 A B 41 -5.452 -17.480 91.148 1.00 64.79 C
ATOM 16 N7 A B 41 -4.818 -17.177 90.042 1.00 64.63 N
ATOM 17 C5 A B 41 -5.807 -17.210 89.075 1.00 64.35 C
ATOM 18 C6 A B 41 -5.779 -16.977 87.683 1.00 64.19 C
ATOM 19 N6 A B 41 -4.665 -16.655 87.016 1.00 64.03 N
ATOM 20 N1 A B 41 -6.942 -17.092 87.004 1.00 64.23 N
ATOM 21 C2 A B 41 -8.058 -17.419 87.676 1.00 64.41 C
ATOM 22 N3 A B 41 -8.208 -17.656 88.983 1.00 64.28 N
ATOM 23 C4 A B 41 -7.034 -17.536 89.634 1.00 64.55 C
ATOM 24 P U B 42 -10.813 -19.948 94.964 1.00 65.35 P
ATOM 25 OP1 U B 42 -10.384 -19.283 96.215 1.00 65.09 O
ATOM 26 OP2 U B 42 -10.803 -21.426 94.887 1.00 65.30 O
ATOM 27 O5' U B 42 -12.281 -19.413 94.609 1.00 65.13 O
TER
Atoms:
OP1: (-2.109,-18.083,80.106)
OP2: (-0.973,-18.423,82.374)
C3': (-6.288,-18.073,83.336)
C1': (-6.259,-20.178,84.362)
C5': (-4.675,-18.741,81.431)
O4': (-5.562,-20.271,83.128)
C8: (-3.989,-19.743,85.428)
O2': (-8.396,-19.304,83.661)
C6: (-4.406,-20.246,88.885)
C5: (-4.391,-20.079,87.482)
C4: (-5.586,-20.299,86.816)
P: (-2.055,-18.769,81.419)
C4': (-5.861,-19.110,82.308)
C2': (-7.155,-18.947,84.239)
C2: (-6.659,-20.786,88.697)
N1: (-5.576,-20.603,89.468)
N3: (-6.762,-20.656,87.372)
N6: (-3.327,-20.068,89.657)
N7: (-3.389,-19.729,86.595)
N9: (-5.316,-20.082,85.481)
O5': (-3.462,-18.605,82.172)
O3': (-6.988,-16.978,82.743)
OP2: (-0.973,-18.423,82.374)
C3': (-6.288,-18.073,83.336)
C1': (-6.259,-20.178,84.362)
C5': (-4.675,-18.741,81.431)
O4': (-5.562,-20.271,83.128)
C8: (-3.989,-19.743,85.428)
O2': (-8.396,-19.304,83.661)
C6: (-4.406,-20.246,88.885)
C5: (-4.391,-20.079,87.482)
C4: (-5.586,-20.299,86.816)
P: (-2.055,-18.769,81.419)
C4': (-5.861,-19.110,82.308)
C2': (-7.155,-18.947,84.239)
C2: (-6.659,-20.786,88.697)
N1: (-5.576,-20.603,89.468)
N3: (-6.762,-20.656,87.372)
N6: (-3.327,-20.068,89.657)
N7: (-3.389,-19.729,86.595)
N9: (-5.316,-20.082,85.481)
O5': (-3.462,-18.605,82.172)
O3': (-6.988,-16.978,82.743)
OP1: (-6.013,-21.464,95.644)
OP2: (-3.867,-20.896,94.369)
C3': (-8.518,-19.553,93.692)
C1': (-7.755,-18.062,92.022)
C5': (-6.797,-18.630,95.373)
O4': (-7.266,-17.573,93.253)
C8: (-5.452,-17.480,91.148)
O2': (-8.883,-20.073,91.316)
C6: (-5.779,-16.977,87.683)
C5: (-5.807,-17.210,89.075)
C4: (-7.034,-17.536,89.634)
P: (-4.945,-20.496,95.303)
C4': (-7.861,-18.332,94.333)
C2': (-7.969,-19.552,92.260)
C2: (-8.058,-17.419,87.676)
N1: (-6.942,-17.092,87.004)
N3: (-8.208,-17.656,88.983)
N6: (-4.665,-16.655,87.016)
N7: (-4.818,-17.177,90.042)
N9: (-6.790,-17.714,90.979)
O5': (-5.627,-19.157,94.752)
O3': (-9.939,-19.402,93.734)
OP2: (-3.867,-20.896,94.369)
C3': (-8.518,-19.553,93.692)
C1': (-7.755,-18.062,92.022)
C5': (-6.797,-18.630,95.373)
O4': (-7.266,-17.573,93.253)
C8: (-5.452,-17.480,91.148)
O2': (-8.883,-20.073,91.316)
C6: (-5.779,-16.977,87.683)
C5: (-5.807,-17.210,89.075)
C4: (-7.034,-17.536,89.634)
P: (-4.945,-20.496,95.303)
C4': (-7.861,-18.332,94.333)
C2': (-7.969,-19.552,92.260)
C2: (-8.058,-17.419,87.676)
N1: (-6.942,-17.092,87.004)
N3: (-8.208,-17.656,88.983)
N6: (-4.665,-16.655,87.016)
N7: (-4.818,-17.177,90.042)
N9: (-6.790,-17.714,90.979)
O5': (-5.627,-19.157,94.752)
O3': (-9.939,-19.402,93.734)
Image (generated by PyMOL):