ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0139:0429

Extra

PDB:
ATOM 1 O3' G A 138 61.633 131.913 37.343 1.00 58.53 O
ATOM 2 P A A 139 61.927 131.683 38.912 1.00 62.37 P
ATOM 3 OP1 A A 139 61.415 132.902 39.606 1.00 60.24 O
ATOM 4 OP2 A A 139 63.338 131.257 39.110 1.00 60.16 O
ATOM 5 O5' A A 139 60.998 130.450 39.290 1.00 63.78 O
ATOM 6 C5' A A 139 60.259 130.414 40.526 1.00 65.53 C
ATOM 7 C4' A A 139 59.236 129.310 40.468 1.00 65.90 C
ATOM 8 O4' A A 139 58.287 129.594 39.402 1.00 65.97 O
ATOM 9 C3' A A 139 59.833 127.962 40.104 1.00 65.92 C
ATOM 10 O3' A A 139 60.348 127.318 41.268 1.00 66.44 O
ATOM 11 C2' A A 139 58.659 127.247 39.436 1.00 65.31 C
ATOM 12 O2' A A 139 57.722 126.707 40.349 1.00 65.26 O
ATOM 13 C1' A A 139 57.992 128.403 38.687 1.00 64.04 C
ATOM 14 N9 A A 139 58.442 128.585 37.304 1.00 62.73 N
ATOM 15 C8 A A 139 59.306 129.543 36.826 1.00 60.42 C
ATOM 16 N7 A A 139 59.485 129.497 35.530 1.00 58.37 N
ATOM 17 C5 A A 139 58.697 128.431 35.125 1.00 60.12 C
ATOM 18 C6 A A 139 58.452 127.871 33.864 1.00 59.59 C
ATOM 19 N6 A A 139 58.995 128.332 32.733 1.00 59.31 N
ATOM 20 N1 A A 139 57.622 126.809 33.800 1.00 59.34 N
ATOM 21 C2 A A 139 57.081 126.350 34.934 1.00 59.62 C
ATOM 22 N3 A A 139 57.231 126.792 36.179 1.00 60.15 N
ATOM 23 C4 A A 139 58.060 127.849 36.207 1.00 61.19 C
ATOM 24 P A A 140 61.916 126.949 41.359 1.00 68.14 P
ATOM 25 OP1 A A 140 62.246 127.002 42.804 1.00 71.30 O
ATOM 26 OP2 A A 140 62.688 127.779 40.401 1.00 69.37 O
ATOM 27 O5' A A 140 62.006 125.429 40.887 1.00 63.56 O
TER

ATOM 1 O3' C B 428 55.686 120.894 37.860 1.00 62.29 O
ATOM 2 P A B 429 54.221 121.247 38.413 1.00 65.41 P
ATOM 3 OP1 A B 429 54.292 121.035 39.884 1.00 65.51 O
ATOM 4 OP2 A B 429 53.201 120.520 37.617 1.00 65.22 O
ATOM 5 O5' A B 429 54.061 122.803 38.124 1.00 64.64 O
ATOM 6 C5' A B 429 55.145 123.717 38.361 1.00 69.53 C
ATOM 7 C4' A B 429 54.946 124.978 37.551 1.00 72.62 C
ATOM 8 O4' A B 429 54.971 124.654 36.130 1.00 75.30 O
ATOM 9 C3' A B 429 53.625 125.698 37.780 1.00 72.94 C
ATOM 10 O3' A B 429 53.790 127.090 37.603 1.00 69.86 O
ATOM 11 C2' A B 429 52.713 125.090 36.715 1.00 74.32 C
ATOM 12 O2' A B 429 51.637 125.913 36.305 1.00 73.65 O
ATOM 13 C1' A B 429 53.683 124.839 35.561 1.00 75.34 C
ATOM 14 N9 A B 429 53.323 123.612 34.848 1.00 77.94 N
ATOM 15 C8 A B 429 53.219 122.341 35.374 1.00 78.32 C
ATOM 16 N7 A B 429 52.839 121.438 34.507 1.00 78.51 N
ATOM 17 C5 A B 429 52.689 122.154 33.327 1.00 79.09 C
ATOM 18 C6 A B 429 52.293 121.771 32.038 1.00 79.14 C
ATOM 19 N6 A B 429 51.948 120.523 31.712 1.00 80.10 N
ATOM 20 N1 A B 429 52.256 122.725 31.084 1.00 78.60 N
ATOM 21 C2 A B 429 52.587 123.976 31.415 1.00 78.11 C
ATOM 22 N3 A B 429 52.965 124.465 32.593 1.00 78.16 N
ATOM 23 C4 A B 429 52.996 123.492 33.519 1.00 78.36 C
ATOM 24 P A B 430 52.930 128.095 38.499 1.00 68.12 P
ATOM 25 OP1 A B 430 53.479 128.003 39.872 1.00 70.93 O
ATOM 26 OP2 A B 430 51.496 127.814 38.267 1.00 67.86 O
ATOM 27 O5' A B 430 53.266 129.528 37.893 1.00 69.35 O
TER

Atoms:
OP1: (61.415,132.902,39.606)
OP2: (63.338,131.257,39.110)
C3': (59.833,127.962,40.104)
C1': (57.992,128.403,38.687)
C5': (60.259,130.414,40.526)
O4': (58.287,129.594,39.402)
C8: (59.306,129.543,36.826)
O2': (57.722,126.707,40.349)
C6: (58.452,127.871,33.864)
C5: (58.697,128.431,35.125)
C4: (58.060,127.849,36.207)
P: (61.927,131.683,38.912)
C4': (59.236,129.310,40.468)
C2': (58.659,127.247,39.436)
C2: (57.081,126.350,34.934)
N1: (57.622,126.809,33.800)
N3: (57.231,126.792,36.179)
N6: (58.995,128.332,32.733)
N7: (59.485,129.497,35.530)
N9: (58.442,128.585,37.304)
O5': (60.998,130.450,39.290)
O3': (60.348,127.318,41.268)
OP1: (54.292,121.035,39.884)
OP2: (53.201,120.520,37.617)
C3': (53.625,125.698,37.780)
C1': (53.683,124.839,35.561)
C5': (55.145,123.717,38.361)
O4': (54.971,124.654,36.130)
C8: (53.219,122.341,35.374)
O2': (51.637,125.913,36.305)
C6: (52.293,121.771,32.038)
C5: (52.689,122.154,33.327)
C4: (52.996,123.492,33.519)
P: (54.221,121.247,38.413)
C4': (54.946,124.978,37.551)
C2': (52.713,125.090,36.715)
C2: (52.587,123.976,31.415)
N1: (52.256,122.725,31.084)
N3: (52.965,124.465,32.593)
N6: (51.948,120.523,31.712)
N7: (52.839,121.438,34.507)
N9: (53.323,123.612,34.848)
O5': (54.061,122.803,38.124)
O3': (53.790,127.090,37.603)
Image (generated by PyMOL):
PyMOL image
show in jmol