ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:01218:01045

Extra

PDB:
ATOM 1 O3' G A1217 16.846 103.855 108.475 1.00 54.46 O
ATOM 2 P A A1218 16.244 103.785 106.988 1.00 56.90 P
ATOM 3 OP1 A A1218 16.443 105.126 106.382 1.00 56.54 O
ATOM 4 OP2 A A1218 14.879 103.196 107.029 1.00 58.11 O
ATOM 5 O5' A A1218 17.201 102.750 106.249 1.00 54.64 O
ATOM 6 C5' A A1218 16.803 102.143 105.020 1.00 51.70 C
ATOM 7 C4' A A1218 17.975 102.048 104.072 1.00 50.60 C
ATOM 8 O4' A A1218 19.014 101.204 104.628 1.00 48.42 O
ATOM 9 C3' A A1218 17.616 101.392 102.756 1.00 50.46 C
ATOM 10 O3' A A1218 17.093 102.371 101.877 1.00 50.45 O
ATOM 11 C2' A A1218 18.945 100.831 102.290 1.00 49.03 C
ATOM 12 O2' A A1218 19.756 101.846 101.737 1.00 51.89 O
ATOM 13 C1' A A1218 19.551 100.374 103.616 1.00 46.96 C
ATOM 14 N9 A A1218 19.250 98.990 103.979 1.00 46.94 N
ATOM 15 C8 A A1218 18.214 98.547 104.761 1.00 46.87 C
ATOM 16 N7 A A1218 18.224 97.254 104.970 1.00 46.29 N
ATOM 17 C5 A A1218 19.331 96.811 104.268 1.00 44.48 C
ATOM 18 C6 A A1218 19.888 95.537 104.097 1.00 44.01 C
ATOM 19 N6 A A1218 19.405 94.435 104.668 1.00 44.47 N
ATOM 20 N1 A A1218 20.982 95.430 103.317 1.00 44.98 N
ATOM 21 C2 A A1218 21.482 96.538 102.764 1.00 45.73 C
ATOM 22 N3 A A1218 21.057 97.795 102.861 1.00 46.45 N
ATOM 23 C4 A A1218 19.964 97.865 103.637 1.00 46.55 C
ATOM 24 P G A1219 15.892 101.994 100.895 1.00 50.55 P
ATOM 25 OP1 G A1219 15.261 103.266 100.471 1.00 53.40 O
ATOM 26 OP2 G A1219 15.074 100.951 101.559 1.00 52.96 O
ATOM 27 O5' G A1219 16.618 101.332 99.644 1.00 49.71 O
TER

ATOM 1 O3' C B1044 24.482 91.538 105.451 1.00 43.06 O
ATOM 2 P A B1045 24.609 90.718 104.076 1.00 45.11 P
ATOM 3 OP1 A B1045 23.491 89.738 103.991 1.00 46.17 O
ATOM 4 OP2 A B1045 26.007 90.236 103.927 1.00 44.51 O
ATOM 5 O5' A B1045 24.419 91.838 102.964 1.00 45.69 O
ATOM 6 C5' A B1045 23.212 92.598 102.855 1.00 44.94 C
ATOM 7 C4' A B1045 23.398 93.664 101.813 1.00 47.97 C
ATOM 8 O4' A B1045 24.424 94.581 102.275 1.00 51.07 O
ATOM 9 C3' A B1045 23.920 93.160 100.474 1.00 47.25 C
ATOM 10 O3' A B1045 22.852 92.724 99.641 1.00 48.27 O
ATOM 11 C2' A B1045 24.606 94.397 99.914 1.00 47.88 C
ATOM 12 O2' A B1045 23.699 95.339 99.395 1.00 47.74 O
ATOM 13 C1' A B1045 25.222 95.000 101.178 1.00 50.48 C
ATOM 14 N9 A B1045 26.595 94.555 101.416 1.00 50.56 N
ATOM 15 C8 A B1045 27.014 93.515 102.200 1.00 50.83 C
ATOM 16 N7 A B1045 28.311 93.358 102.221 1.00 50.93 N
ATOM 17 C5 A B1045 28.779 94.364 101.395 1.00 51.12 C
ATOM 18 C6 A B1045 30.071 94.744 101.019 1.00 51.33 C
ATOM 19 N6 A B1045 31.174 94.124 101.443 1.00 49.72 N
ATOM 20 N1 A B1045 30.196 95.801 100.184 1.00 50.98 N
ATOM 21 C2 A B1045 29.088 96.421 99.768 1.00 50.42 C
ATOM 22 N3 A B1045 27.819 96.157 100.056 1.00 50.91 N
ATOM 23 C4 A B1045 27.732 95.106 100.887 1.00 50.55 C
ATOM 24 P G B1046 22.843 91.227 99.047 1.00 50.84 P
ATOM 25 OP1 G B1046 21.421 90.812 99.024 1.00 53.58 O
ATOM 26 OP2 G B1046 23.840 90.379 99.742 1.00 50.13 O
ATOM 27 O5' G B1046 23.301 91.402 97.530 1.00 51.60 O
TER

Atoms:
OP1: (16.443,105.126,106.382)
OP2: (14.879,103.196,107.029)
C3': (17.616,101.392,102.756)
C1': (19.551,100.374,103.616)
C5': (16.803,102.143,105.020)
O4': (19.014,101.204,104.628)
C8: (18.214,98.547,104.761)
O2': (19.756,101.846,101.737)
C6: (19.888,95.537,104.097)
C5: (19.331,96.811,104.268)
C4: (19.964,97.865,103.637)
P: (16.244,103.785,106.988)
C4': (17.975,102.048,104.072)
C2': (18.945,100.831,102.290)
C2: (21.482,96.538,102.764)
N1: (20.982,95.430,103.317)
N3: (21.057,97.795,102.861)
N6: (19.405,94.435,104.668)
N7: (18.224,97.254,104.970)
N9: (19.250,98.990,103.979)
O5': (17.201,102.750,106.249)
O3': (17.093,102.371,101.877)
OP1: (23.491,89.738,103.991)
OP2: (26.007,90.236,103.927)
C3': (23.920,93.160,100.474)
C1': (25.222,95.000,101.178)
C5': (23.212,92.598,102.855)
O4': (24.424,94.581,102.275)
C8: (27.014,93.515,102.200)
O2': (23.699,95.339,99.395)
C6: (30.071,94.744,101.019)
C5: (28.779,94.364,101.395)
C4: (27.732,95.106,100.887)
P: (24.609,90.718,104.076)
C4': (23.398,93.664,101.813)
C2': (24.606,94.397,99.914)
C2: (29.088,96.421,99.768)
N1: (30.196,95.801,100.184)
N3: (27.819,96.157,100.056)
N6: (31.174,94.124,101.443)
N7: (28.311,93.358,102.221)
N9: (26.595,94.555,101.416)
O5': (24.419,91.838,102.964)
O3': (22.852,92.724,99.641)
Image (generated by PyMOL):
PyMOL image
show in jmol