ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02024:01037

Extra

PDB:
ATOM 1 O3' C A2023 33.275 115.344 106.419 1.00 37.96 O
ATOM 2 P U A2024 32.270 116.040 107.459 1.00 40.06 P
ATOM 3 OP1 U A2024 30.908 115.592 107.073 1.00 41.03 O
ATOM 4 OP2 U A2024 32.573 117.497 107.551 1.00 41.05 O
ATOM 5 O5' U A2024 32.644 115.374 108.851 1.00 39.17 O
ATOM 6 C5' U A2024 32.608 113.950 109.007 1.00 42.83 C
ATOM 7 C4' U A2024 33.185 113.558 110.341 1.00 43.67 C
ATOM 8 O4' U A2024 34.635 113.626 110.314 1.00 44.56 O
ATOM 9 C3' U A2024 32.797 114.463 111.495 1.00 42.97 C
ATOM 10 O3' U A2024 31.478 114.185 111.948 1.00 42.19 O
ATOM 11 C2' U A2024 33.896 114.164 112.506 1.00 42.93 C
ATOM 12 O2' U A2024 33.717 112.921 113.150 1.00 43.83 O
ATOM 13 C1' U A2024 35.114 114.040 111.589 1.00 42.62 C
ATOM 14 N1 U A2024 35.870 115.294 111.423 1.00 42.40 N
ATOM 15 C2 U A2024 36.866 115.583 112.345 1.00 42.48 C
ATOM 16 O2 U A2024 37.087 114.898 113.326 1.00 44.05 O
ATOM 17 N3 U A2024 37.605 116.701 112.062 1.00 42.10 N
ATOM 18 C4 U A2024 37.456 117.546 110.983 1.00 40.38 C
ATOM 19 O4 U A2024 38.251 118.480 110.829 1.00 34.77 O
ATOM 20 C5 U A2024 36.359 117.232 110.126 1.00 40.78 C
ATOM 21 C6 U A2024 35.618 116.150 110.372 1.00 41.50 C
ATOM 22 P G A2025 30.626 115.337 112.672 1.00 42.61 P
ATOM 23 OP1 G A2025 29.277 114.773 112.902 1.00 45.57 O
ATOM 24 OP2 G A2025 30.766 116.627 111.954 1.00 42.32 O
ATOM 25 O5' G A2025 31.352 115.472 114.083 1.00 44.90 O
TER

ATOM 1 O3' G B1036 32.192 103.743 114.736 1.00 47.49 O
ATOM 2 P A B1037 33.219 104.979 114.923 1.00 48.90 P
ATOM 3 OP1 A B1037 34.575 104.559 114.482 1.00 46.32 O
ATOM 4 OP2 A B1037 33.017 105.452 116.315 1.00 50.32 O
ATOM 5 O5' A B1037 32.709 106.123 113.934 1.00 45.53 O
ATOM 6 C5' A B1037 31.403 106.718 114.080 1.00 44.81 C
ATOM 7 C4' A B1037 31.484 108.206 113.845 1.00 42.23 C
ATOM 8 O4' A B1037 32.176 108.810 114.956 1.00 42.00 O
ATOM 9 C3' A B1037 32.270 108.630 112.610 1.00 41.23 C
ATOM 10 O3' A B1037 31.409 108.662 111.472 1.00 42.16 O
ATOM 11 C2' A B1037 32.785 110.019 112.983 1.00 39.14 C
ATOM 12 O2' A B1037 31.829 111.037 112.794 1.00 36.47 O
ATOM 13 C1' A B1037 32.990 109.876 114.492 1.00 39.01 C
ATOM 14 N9 A B1037 34.345 109.651 114.987 1.00 36.79 N
ATOM 15 C8 A B1037 34.941 108.453 115.299 1.00 35.97 C
ATOM 16 N7 A B1037 36.108 108.580 115.879 1.00 37.38 N
ATOM 17 C5 A B1037 36.309 109.954 115.918 1.00 36.29 C
ATOM 18 C6 A B1037 37.346 110.740 116.439 1.00 35.94 C
ATOM 19 N6 A B1037 38.419 110.236 117.045 1.00 34.19 N
ATOM 20 N1 A B1037 37.241 112.083 116.317 1.00 36.00 N
ATOM 21 C2 A B1037 36.163 112.588 115.706 1.00 35.22 C
ATOM 22 N3 A B1037 35.122 111.953 115.181 1.00 36.08 N
ATOM 23 C4 A B1037 35.253 110.621 115.329 1.00 36.15 C
ATOM 24 P A B1038 31.705 107.703 110.217 1.00 41.92 P
ATOM 25 OP1 A B1038 30.468 107.700 109.419 1.00 43.32 O
ATOM 26 OP2 A B1038 32.276 106.420 110.704 1.00 40.87 O
ATOM 27 O5' A B1038 32.851 108.454 109.399 1.00 43.86 O
TER

Atoms:
C4: (37.456,117.546,110.983)
N3: (37.605,116.701,112.062)
OP1: (30.908,115.592,107.073)
OP2: (32.573,117.497,107.551)
C2: (36.866,115.583,112.345)
C1': (35.114,114.040,111.589)
C3': (32.797,114.463,111.495)
O5': (32.644,115.374,108.851)
O4': (34.635,113.626,110.314)
C5': (32.608,113.950,109.007)
P: (32.270,116.040,107.459)
C4': (33.185,113.558,110.341)
C2': (33.896,114.164,112.506)
O2': (33.717,112.921,113.150)
N1: (35.870,115.294,111.423)
O4: (38.251,118.480,110.829)
O2: (37.087,114.898,113.326)
C6: (35.618,116.150,110.372)
C5: (36.359,117.232,110.126)
O3': (31.478,114.185,111.948)
OP1: (34.575,104.559,114.482)
OP2: (33.017,105.452,116.315)
C3': (32.270,108.630,112.610)
C1': (32.990,109.876,114.492)
C5': (31.403,106.718,114.080)
O4': (32.176,108.810,114.956)
C8: (34.941,108.453,115.299)
O2': (31.829,111.037,112.794)
C6: (37.346,110.740,116.439)
C5: (36.309,109.954,115.918)
C4: (35.253,110.621,115.329)
P: (33.219,104.979,114.923)
C4': (31.484,108.206,113.845)
C2': (32.785,110.019,112.983)
C2: (36.163,112.588,115.706)
N1: (37.241,112.083,116.317)
N3: (35.122,111.953,115.181)
N6: (38.419,110.236,117.045)
N7: (36.108,108.580,115.879)
N9: (34.345,109.651,114.987)
O5': (32.709,106.123,113.934)
O3': (31.409,108.662,111.472)
Image (generated by PyMOL):
PyMOL image
show in jmol