ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01218:01045

Extra

PDB:
ATOM 1 O3' G A1217 17.291 103.901 108.526 1.00 39.09 O
ATOM 2 P A A1218 16.648 103.830 107.060 1.00 40.83 P
ATOM 3 OP1 A A1218 16.797 105.167 106.436 1.00 37.34 O
ATOM 4 OP2 A A1218 15.303 103.198 107.133 1.00 41.33 O
ATOM 5 O5' A A1218 17.601 102.811 106.305 1.00 39.53 O
ATOM 6 C5' A A1218 17.185 102.199 105.089 1.00 36.98 C
ATOM 7 C4' A A1218 18.351 102.080 104.149 1.00 36.78 C
ATOM 8 O4' A A1218 19.377 101.245 104.735 1.00 35.98 O
ATOM 9 C3' A A1218 18.008 101.404 102.841 1.00 37.38 C
ATOM 10 O3' A A1218 17.488 102.369 101.947 1.00 36.42 O
ATOM 11 C2' A A1218 19.351 100.856 102.402 1.00 37.92 C
ATOM 12 O2' A A1218 20.164 101.886 101.883 1.00 42.26 O
ATOM 13 C1' A A1218 19.930 100.404 103.742 1.00 36.34 C
ATOM 14 N9 A A1218 19.595 99.029 104.101 1.00 35.91 N
ATOM 15 C8 A A1218 18.544 98.607 104.877 1.00 37.26 C
ATOM 16 N7 A A1218 18.516 97.313 105.072 1.00 37.58 N
ATOM 17 C5 A A1218 19.614 96.849 104.369 1.00 36.64 C
ATOM 18 C6 A A1218 20.137 95.564 104.187 1.00 36.18 C
ATOM 19 N6 A A1218 19.610 94.468 104.734 1.00 35.62 N
ATOM 20 N1 A A1218 21.238 95.439 103.419 1.00 37.73 N
ATOM 21 C2 A A1218 21.774 96.543 102.881 1.00 38.14 C
ATOM 22 N3 A A1218 21.379 97.809 102.987 1.00 37.47 N
ATOM 23 C4 A A1218 20.281 97.894 103.753 1.00 36.84 C
ATOM 24 P G A1219 16.253 101.994 101.006 1.00 34.48 P
ATOM 25 OP1 G A1219 15.584 103.261 100.626 1.00 36.48 O
ATOM 26 OP2 G A1219 15.474 100.922 101.675 1.00 36.01 O
ATOM 27 O5' G A1219 16.954 101.390 99.717 1.00 33.40 O
TER

ATOM 1 O3' C B1044 24.815 91.647 105.583 1.00 32.58 O
ATOM 2 P A B1045 24.894 90.808 104.218 1.00 33.57 P
ATOM 3 OP1 A B1045 23.740 89.871 104.203 1.00 33.86 O
ATOM 4 OP2 A B1045 26.266 90.267 104.082 1.00 34.27 O
ATOM 5 O5' A B1045 24.693 91.916 103.094 1.00 32.12 O
ATOM 6 C5' A B1045 23.469 92.664 102.989 1.00 31.68 C
ATOM 7 C4' A B1045 23.621 93.729 101.939 1.00 33.83 C
ATOM 8 O4' A B1045 24.623 94.678 102.388 1.00 35.89 O
ATOM 9 C3' A B1045 24.149 93.216 100.608 1.00 34.29 C
ATOM 10 O3' A B1045 23.087 92.743 99.789 1.00 36.06 O
ATOM 11 C2' A B1045 24.829 94.449 100.034 1.00 34.21 C
ATOM 12 O2' A B1045 23.907 95.362 99.493 1.00 35.65 O
ATOM 13 C1' A B1045 25.433 95.074 101.293 1.00 35.54 C
ATOM 14 N9 A B1045 26.806 94.635 101.554 1.00 35.41 N
ATOM 15 C8 A B1045 27.233 93.596 102.342 1.00 34.45 C
ATOM 16 N7 A B1045 28.532 93.446 102.360 1.00 33.98 N
ATOM 17 C5 A B1045 28.994 94.456 101.532 1.00 34.51 C
ATOM 18 C6 A B1045 30.283 94.842 101.144 1.00 34.86 C
ATOM 19 N6 A B1045 31.393 94.231 101.551 1.00 35.21 N
ATOM 20 N1 A B1045 30.398 95.897 100.314 1.00 35.61 N
ATOM 21 C2 A B1045 29.287 96.516 99.908 1.00 34.48 C
ATOM 22 N3 A B1045 28.023 96.251 100.204 1.00 35.64 N
ATOM 23 C4 A B1045 27.943 95.197 101.031 1.00 35.09 C
ATOM 24 P G B1046 23.123 91.242 99.202 1.00 39.96 P
ATOM 25 OP1 G B1046 21.722 90.766 99.174 1.00 42.38 O
ATOM 26 OP2 G B1046 24.154 90.440 99.901 1.00 39.16 O
ATOM 27 O5' G B1046 23.573 91.420 97.685 1.00 39.50 O
TER

Atoms:
OP1: (16.797,105.167,106.436)
OP2: (15.303,103.198,107.133)
C3': (18.008,101.404,102.841)
C1': (19.930,100.404,103.742)
C5': (17.185,102.199,105.089)
O4': (19.377,101.245,104.735)
C8: (18.544,98.607,104.877)
O2': (20.164,101.886,101.883)
C6: (20.137,95.564,104.187)
C5: (19.614,96.849,104.369)
C4: (20.281,97.894,103.753)
P: (16.648,103.830,107.060)
C4': (18.351,102.080,104.149)
C2': (19.351,100.856,102.402)
C2: (21.774,96.543,102.881)
N1: (21.238,95.439,103.419)
N3: (21.379,97.809,102.987)
N6: (19.610,94.468,104.734)
N7: (18.516,97.313,105.072)
N9: (19.595,99.029,104.101)
O5': (17.601,102.811,106.305)
O3': (17.488,102.369,101.947)
OP1: (23.740,89.871,104.203)
OP2: (26.266,90.267,104.082)
C3': (24.149,93.216,100.608)
C1': (25.433,95.074,101.293)
C5': (23.469,92.664,102.989)
O4': (24.623,94.678,102.388)
C8: (27.233,93.596,102.342)
O2': (23.907,95.362,99.493)
C6: (30.283,94.842,101.144)
C5: (28.994,94.456,101.532)
C4: (27.943,95.197,101.031)
P: (24.894,90.808,104.218)
C4': (23.621,93.729,101.939)
C2': (24.829,94.449,100.034)
C2: (29.287,96.516,99.908)
N1: (30.398,95.897,100.314)
N3: (28.023,96.251,100.204)
N6: (31.393,94.231,101.551)
N7: (28.532,93.446,102.360)
N9: (26.806,94.635,101.554)
O5': (24.693,91.916,103.094)
O3': (23.087,92.743,99.789)
Image (generated by PyMOL):
PyMOL image
show in jmol