Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:162:1106
Extra
PDB:
ATOM 1 O3' G A 61 58.701 -43.188 123.305 1.00 51.61 O
ATOM 2 P A A 62 58.025 -43.544 124.715 1.00 56.92 P
ATOM 3 OP1 A A 62 57.389 -44.848 124.526 1.00 57.04 O
ATOM 4 OP2 A A 62 57.201 -42.405 125.150 1.00 56.75 O
ATOM 5 O5' A A 62 59.282 -43.680 125.671 1.00 57.47 O
ATOM 6 C5' A A 62 59.382 -44.737 126.606 1.00 58.06 C
ATOM 7 C4' A A 62 59.906 -46.017 125.976 1.00 58.17 C
ATOM 8 O4' A A 62 60.856 -45.673 124.925 1.00 57.82 O
ATOM 9 C3' A A 62 60.639 -46.892 126.958 1.00 58.84 C
ATOM 10 O3' A A 62 60.216 -48.316 126.959 1.00 59.11 O
ATOM 11 C2' A A 62 62.133 -46.611 126.700 1.00 58.89 C
ATOM 12 O2' A A 62 63.001 -47.697 126.829 1.00 59.32 O
ATOM 13 C1' A A 62 62.182 -45.991 125.298 1.00 58.22 C
ATOM 14 N9 A A 62 62.949 -44.741 125.290 1.00 58.06 N
ATOM 15 C8 A A 62 62.396 -43.520 125.566 1.00 57.83 C
ATOM 16 N7 A A 62 63.249 -42.528 125.597 1.00 57.77 N
ATOM 17 C5 A A 62 64.475 -43.135 125.333 1.00 57.98 C
ATOM 18 C6 A A 62 65.777 -42.618 125.220 1.00 58.04 C
ATOM 19 N6 A A 62 66.080 -41.334 125.359 1.00 57.89 N
ATOM 20 N1 A A 62 66.782 -43.461 124.943 1.00 58.27 N
ATOM 21 C2 A A 62 66.505 -44.756 124.801 1.00 58.44 C
ATOM 22 N3 A A 62 65.319 -45.370 124.889 1.00 58.41 N
ATOM 23 C4 A A 62 64.311 -44.497 125.140 1.00 58.16 C
ATOM 24 P A A 63 60.192 -49.312 125.681 1.00 52.88 P
ATOM 25 OP1 A A 63 59.714 -50.599 126.158 1.00 53.31 O
ATOM 26 OP2 A A 63 61.517 -49.262 125.072 1.00 52.82 O
ATOM 27 O5' A A 63 59.087 -48.713 124.704 1.00 52.22 O
TER
ATOM 1 O3' A B 105 74.089 -41.255 123.907 1.00 51.21 O
ATOM 2 P A B 106 74.942 -42.111 124.971 1.00 55.04 P
ATOM 3 OP1 A B 106 75.713 -41.146 125.781 1.00 55.33 O
ATOM 4 OP2 A B 106 75.677 -43.149 124.218 1.00 55.12 O
ATOM 5 O5' A B 106 73.814 -42.779 125.869 1.00 55.30 O
ATOM 6 C5' A B 106 73.520 -44.161 125.778 1.00 55.50 C
ATOM 7 C4' A B 106 72.109 -44.441 126.203 1.00 55.45 C
ATOM 8 O4' A B 106 71.670 -43.394 127.114 1.00 55.51 O
ATOM 9 C3' A B 106 71.098 -44.451 125.071 1.00 54.82 C
ATOM 10 O3' A B 106 69.978 -45.271 125.451 1.00 54.94 O
ATOM 11 C2' A B 106 70.673 -42.964 125.023 1.00 54.41 C
ATOM 12 O2' A B 106 69.434 -42.699 124.385 1.00 53.89 O
ATOM 13 C1' A B 106 70.634 -42.624 126.511 1.00 54.91 C
ATOM 14 N9 A B 106 70.867 -41.204 126.829 1.00 54.80 N
ATOM 15 C8 A B 106 72.034 -40.467 126.817 1.00 54.88 C
ATOM 16 N7 A B 106 71.892 -39.215 127.210 1.00 54.78 N
ATOM 17 C5 A B 106 70.541 -39.103 127.536 1.00 54.63 C
ATOM 18 C6 A B 106 69.722 -38.052 127.995 1.00 54.49 C
ATOM 19 N6 A B 106 70.072 -36.812 128.268 1.00 54.45 N
ATOM 20 N1 A B 106 68.438 -38.328 128.171 1.00 54.38 N
ATOM 21 C2 A B 106 67.956 -39.539 127.914 1.00 54.40 C
ATOM 22 N3 A B 106 68.585 -40.610 127.473 1.00 54.53 N
ATOM 23 C4 A B 106 69.899 -40.329 127.304 1.00 54.65 C
ATOM 24 P G B 107 70.133 -46.861 125.736 1.00 58.78 P
ATOM 25 OP1 G B 107 71.575 -47.171 125.835 1.00 59.16 O
ATOM 26 OP2 G B 107 69.319 -47.581 124.705 1.00 58.40 O
ATOM 27 O5' G B 107 69.435 -47.024 127.150 1.00 59.25 O
TER
ATOM 2 P A A 62 58.025 -43.544 124.715 1.00 56.92 P
ATOM 3 OP1 A A 62 57.389 -44.848 124.526 1.00 57.04 O
ATOM 4 OP2 A A 62 57.201 -42.405 125.150 1.00 56.75 O
ATOM 5 O5' A A 62 59.282 -43.680 125.671 1.00 57.47 O
ATOM 6 C5' A A 62 59.382 -44.737 126.606 1.00 58.06 C
ATOM 7 C4' A A 62 59.906 -46.017 125.976 1.00 58.17 C
ATOM 8 O4' A A 62 60.856 -45.673 124.925 1.00 57.82 O
ATOM 9 C3' A A 62 60.639 -46.892 126.958 1.00 58.84 C
ATOM 10 O3' A A 62 60.216 -48.316 126.959 1.00 59.11 O
ATOM 11 C2' A A 62 62.133 -46.611 126.700 1.00 58.89 C
ATOM 12 O2' A A 62 63.001 -47.697 126.829 1.00 59.32 O
ATOM 13 C1' A A 62 62.182 -45.991 125.298 1.00 58.22 C
ATOM 14 N9 A A 62 62.949 -44.741 125.290 1.00 58.06 N
ATOM 15 C8 A A 62 62.396 -43.520 125.566 1.00 57.83 C
ATOM 16 N7 A A 62 63.249 -42.528 125.597 1.00 57.77 N
ATOM 17 C5 A A 62 64.475 -43.135 125.333 1.00 57.98 C
ATOM 18 C6 A A 62 65.777 -42.618 125.220 1.00 58.04 C
ATOM 19 N6 A A 62 66.080 -41.334 125.359 1.00 57.89 N
ATOM 20 N1 A A 62 66.782 -43.461 124.943 1.00 58.27 N
ATOM 21 C2 A A 62 66.505 -44.756 124.801 1.00 58.44 C
ATOM 22 N3 A A 62 65.319 -45.370 124.889 1.00 58.41 N
ATOM 23 C4 A A 62 64.311 -44.497 125.140 1.00 58.16 C
ATOM 24 P A A 63 60.192 -49.312 125.681 1.00 52.88 P
ATOM 25 OP1 A A 63 59.714 -50.599 126.158 1.00 53.31 O
ATOM 26 OP2 A A 63 61.517 -49.262 125.072 1.00 52.82 O
ATOM 27 O5' A A 63 59.087 -48.713 124.704 1.00 52.22 O
TER
ATOM 1 O3' A B 105 74.089 -41.255 123.907 1.00 51.21 O
ATOM 2 P A B 106 74.942 -42.111 124.971 1.00 55.04 P
ATOM 3 OP1 A B 106 75.713 -41.146 125.781 1.00 55.33 O
ATOM 4 OP2 A B 106 75.677 -43.149 124.218 1.00 55.12 O
ATOM 5 O5' A B 106 73.814 -42.779 125.869 1.00 55.30 O
ATOM 6 C5' A B 106 73.520 -44.161 125.778 1.00 55.50 C
ATOM 7 C4' A B 106 72.109 -44.441 126.203 1.00 55.45 C
ATOM 8 O4' A B 106 71.670 -43.394 127.114 1.00 55.51 O
ATOM 9 C3' A B 106 71.098 -44.451 125.071 1.00 54.82 C
ATOM 10 O3' A B 106 69.978 -45.271 125.451 1.00 54.94 O
ATOM 11 C2' A B 106 70.673 -42.964 125.023 1.00 54.41 C
ATOM 12 O2' A B 106 69.434 -42.699 124.385 1.00 53.89 O
ATOM 13 C1' A B 106 70.634 -42.624 126.511 1.00 54.91 C
ATOM 14 N9 A B 106 70.867 -41.204 126.829 1.00 54.80 N
ATOM 15 C8 A B 106 72.034 -40.467 126.817 1.00 54.88 C
ATOM 16 N7 A B 106 71.892 -39.215 127.210 1.00 54.78 N
ATOM 17 C5 A B 106 70.541 -39.103 127.536 1.00 54.63 C
ATOM 18 C6 A B 106 69.722 -38.052 127.995 1.00 54.49 C
ATOM 19 N6 A B 106 70.072 -36.812 128.268 1.00 54.45 N
ATOM 20 N1 A B 106 68.438 -38.328 128.171 1.00 54.38 N
ATOM 21 C2 A B 106 67.956 -39.539 127.914 1.00 54.40 C
ATOM 22 N3 A B 106 68.585 -40.610 127.473 1.00 54.53 N
ATOM 23 C4 A B 106 69.899 -40.329 127.304 1.00 54.65 C
ATOM 24 P G B 107 70.133 -46.861 125.736 1.00 58.78 P
ATOM 25 OP1 G B 107 71.575 -47.171 125.835 1.00 59.16 O
ATOM 26 OP2 G B 107 69.319 -47.581 124.705 1.00 58.40 O
ATOM 27 O5' G B 107 69.435 -47.024 127.150 1.00 59.25 O
TER
Atoms:
OP1: (57.389,-44.848,124.526)
OP2: (57.201,-42.405,125.150)
C3': (60.639,-46.892,126.958)
C1': (62.182,-45.991,125.298)
C5': (59.382,-44.737,126.606)
O4': (60.856,-45.673,124.925)
C8: (62.396,-43.520,125.566)
O2': (63.001,-47.697,126.829)
C6: (65.777,-42.618,125.220)
C5: (64.475,-43.135,125.333)
C4: (64.311,-44.497,125.140)
P: (58.025,-43.544,124.715)
C4': (59.906,-46.017,125.976)
C2': (62.133,-46.611,126.700)
C2: (66.505,-44.756,124.801)
N1: (66.782,-43.461,124.943)
N3: (65.319,-45.370,124.889)
N6: (66.080,-41.334,125.359)
N7: (63.249,-42.528,125.597)
N9: (62.949,-44.741,125.290)
O5': (59.282,-43.680,125.671)
O3': (60.216,-48.316,126.959)
OP2: (57.201,-42.405,125.150)
C3': (60.639,-46.892,126.958)
C1': (62.182,-45.991,125.298)
C5': (59.382,-44.737,126.606)
O4': (60.856,-45.673,124.925)
C8: (62.396,-43.520,125.566)
O2': (63.001,-47.697,126.829)
C6: (65.777,-42.618,125.220)
C5: (64.475,-43.135,125.333)
C4: (64.311,-44.497,125.140)
P: (58.025,-43.544,124.715)
C4': (59.906,-46.017,125.976)
C2': (62.133,-46.611,126.700)
C2: (66.505,-44.756,124.801)
N1: (66.782,-43.461,124.943)
N3: (65.319,-45.370,124.889)
N6: (66.080,-41.334,125.359)
N7: (63.249,-42.528,125.597)
N9: (62.949,-44.741,125.290)
O5': (59.282,-43.680,125.671)
O3': (60.216,-48.316,126.959)
OP1: (75.713,-41.146,125.781)
OP2: (75.677,-43.149,124.218)
C3': (71.098,-44.451,125.071)
C1': (70.634,-42.624,126.511)
C5': (73.520,-44.161,125.778)
O4': (71.670,-43.394,127.114)
C8: (72.034,-40.467,126.817)
O2': (69.434,-42.699,124.385)
C6: (69.722,-38.052,127.995)
C5: (70.541,-39.103,127.536)
C4: (69.899,-40.329,127.304)
P: (74.942,-42.111,124.971)
C4': (72.109,-44.441,126.203)
C2': (70.673,-42.964,125.023)
C2: (67.956,-39.539,127.914)
N1: (68.438,-38.328,128.171)
N3: (68.585,-40.610,127.473)
N6: (70.072,-36.812,128.268)
N7: (71.892,-39.215,127.210)
N9: (70.867,-41.204,126.829)
O5': (73.814,-42.779,125.869)
O3': (69.978,-45.271,125.451)
OP2: (75.677,-43.149,124.218)
C3': (71.098,-44.451,125.071)
C1': (70.634,-42.624,126.511)
C5': (73.520,-44.161,125.778)
O4': (71.670,-43.394,127.114)
C8: (72.034,-40.467,126.817)
O2': (69.434,-42.699,124.385)
C6: (69.722,-38.052,127.995)
C5: (70.541,-39.103,127.536)
C4: (69.899,-40.329,127.304)
P: (74.942,-42.111,124.971)
C4': (72.109,-44.441,126.203)
C2': (70.673,-42.964,125.023)
C2: (67.956,-39.539,127.914)
N1: (68.438,-38.328,128.171)
N3: (68.585,-40.610,127.473)
N6: (70.072,-36.812,128.268)
N7: (71.892,-39.215,127.210)
N9: (70.867,-41.204,126.829)
O5': (73.814,-42.779,125.869)
O3': (69.978,-45.271,125.451)
Image (generated by PyMOL):