ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01218:01045

Extra

PDB:
ATOM 1 O3' G A1217 17.162 103.885 108.597 1.00 41.37 O
ATOM 2 P A A1218 16.550 103.794 107.115 1.00 44.72 P
ATOM 3 OP1 A A1218 16.742 105.126 106.484 1.00 41.80 O
ATOM 4 OP2 A A1218 15.186 103.187 107.157 1.00 44.51 O
ATOM 5 O5' A A1218 17.511 102.762 106.376 1.00 42.99 O
ATOM 6 C5' A A1218 17.112 102.147 105.144 1.00 41.35 C
ATOM 7 C4' A A1218 18.283 102.045 104.200 1.00 39.99 C
ATOM 8 O4' A A1218 19.327 101.230 104.785 1.00 39.62 O
ATOM 9 C3' A A1218 17.947 101.358 102.894 1.00 40.35 C
ATOM 10 O3' A A1218 17.429 102.316 101.989 1.00 39.72 O
ATOM 11 C2' A A1218 19.296 100.821 102.458 1.00 40.37 C
ATOM 12 O2' A A1218 20.093 101.861 101.939 1.00 44.39 O
ATOM 13 C1' A A1218 19.886 100.386 103.799 1.00 38.77 C
ATOM 14 N9 A A1218 19.565 99.011 104.172 1.00 38.29 N
ATOM 15 C8 A A1218 18.509 98.593 104.941 1.00 39.37 C
ATOM 16 N7 A A1218 18.478 97.299 105.141 1.00 39.07 N
ATOM 17 C5 A A1218 19.580 96.829 104.451 1.00 36.46 C
ATOM 18 C6 A A1218 20.091 95.542 104.269 1.00 36.89 C
ATOM 19 N6 A A1218 19.543 94.448 104.801 1.00 35.86 N
ATOM 20 N1 A A1218 21.202 95.409 103.514 1.00 39.39 N
ATOM 21 C2 A A1218 21.755 96.512 102.987 1.00 39.27 C
ATOM 22 N3 A A1218 21.367 97.780 103.090 1.00 38.15 N
ATOM 23 C4 A A1218 20.259 97.872 103.843 1.00 38.26 C
ATOM 24 P G A1219 16.190 101.940 101.046 1.00 39.89 P
ATOM 25 OP1 G A1219 15.545 103.221 100.673 1.00 39.96 O
ATOM 26 OP2 G A1219 15.384 100.866 101.682 1.00 41.49 O
ATOM 27 O5' G A1219 16.881 101.319 99.757 1.00 39.43 O
TER

ATOM 1 O3' C B1044 24.804 91.580 105.638 1.00 36.80 O
ATOM 2 P A B1045 24.887 90.753 104.262 1.00 39.22 P
ATOM 3 OP1 A B1045 23.756 89.790 104.225 1.00 39.49 O
ATOM 4 OP2 A B1045 26.272 90.244 104.088 1.00 39.14 O
ATOM 5 O5' A B1045 24.660 91.864 103.150 1.00 37.89 O
ATOM 6 C5' A B1045 23.425 92.586 103.037 1.00 35.18 C
ATOM 7 C4' A B1045 23.574 93.651 101.986 1.00 38.35 C
ATOM 8 O4' A B1045 24.571 94.610 102.436 1.00 42.64 O
ATOM 9 C3' A B1045 24.113 93.135 100.662 1.00 37.32 C
ATOM 10 O3' A B1045 23.053 92.654 99.845 1.00 39.08 O
ATOM 11 C2' A B1045 24.798 94.365 100.084 1.00 38.35 C
ATOM 12 O2' A B1045 23.894 95.278 99.510 1.00 36.67 O
ATOM 13 C1' A B1045 25.388 95.005 101.344 1.00 41.07 C
ATOM 14 N9 A B1045 26.762 94.586 101.628 1.00 42.28 N
ATOM 15 C8 A B1045 27.174 93.595 102.480 1.00 41.90 C
ATOM 16 N7 A B1045 28.471 93.440 102.523 1.00 42.82 N
ATOM 17 C5 A B1045 28.949 94.397 101.644 1.00 42.46 C
ATOM 18 C6 A B1045 30.247 94.756 101.261 1.00 42.26 C
ATOM 19 N6 A B1045 31.345 94.163 101.728 1.00 40.41 N
ATOM 20 N1 A B1045 30.383 95.761 100.371 1.00 42.56 N
ATOM 21 C2 A B1045 29.280 96.358 99.909 1.00 42.52 C
ATOM 22 N3 A B1045 28.007 96.112 100.197 1.00 42.78 N
ATOM 23 C4 A B1045 27.908 95.109 101.084 1.00 42.60 C
ATOM 24 P G B1046 23.118 91.168 99.227 1.00 42.90 P
ATOM 25 OP1 G B1046 21.730 90.658 99.202 1.00 44.26 O
ATOM 26 OP2 G B1046 24.172 90.374 99.897 1.00 42.62 O
ATOM 27 O5' G B1046 23.570 91.400 97.718 1.00 42.03 O
TER

Atoms:
OP1: (16.742,105.126,106.484)
OP2: (15.186,103.187,107.157)
C3': (17.947,101.358,102.894)
C1': (19.886,100.386,103.799)
C5': (17.112,102.147,105.144)
O4': (19.327,101.230,104.785)
C8: (18.509,98.593,104.941)
O2': (20.093,101.861,101.939)
C6: (20.091,95.542,104.269)
C5: (19.580,96.829,104.451)
C4: (20.259,97.872,103.843)
P: (16.550,103.794,107.115)
C4': (18.283,102.045,104.200)
C2': (19.296,100.821,102.458)
C2: (21.755,96.512,102.987)
N1: (21.202,95.409,103.514)
N3: (21.367,97.780,103.090)
N6: (19.543,94.448,104.801)
N7: (18.478,97.299,105.141)
N9: (19.565,99.011,104.172)
O5': (17.511,102.762,106.376)
O3': (17.429,102.316,101.989)
OP1: (23.756,89.790,104.225)
OP2: (26.272,90.244,104.088)
C3': (24.113,93.135,100.662)
C1': (25.388,95.005,101.344)
C5': (23.425,92.586,103.037)
O4': (24.571,94.610,102.436)
C8: (27.174,93.595,102.480)
O2': (23.894,95.278,99.510)
C6: (30.247,94.756,101.261)
C5: (28.949,94.397,101.644)
C4: (27.908,95.109,101.084)
P: (24.887,90.753,104.262)
C4': (23.574,93.651,101.986)
C2': (24.798,94.365,100.084)
C2: (29.280,96.358,99.909)
N1: (30.383,95.761,100.371)
N3: (28.007,96.112,100.197)
N6: (31.345,94.163,101.728)
N7: (28.471,93.440,102.523)
N9: (26.762,94.586,101.628)
O5': (24.660,91.864,103.150)
O3': (23.053,92.654,99.845)
Image (generated by PyMOL):
PyMOL image
show in jmol