ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWI:A12:A20

Extra

PDB:
ATOM 1 O3' G A 11 14.959 -45.490 23.306 1.00 66.29 O
ATOM 2 P A A 12 15.568 -44.579 22.140 1.00 65.18 P
ATOM 3 OP1 A A 12 15.778 -43.209 22.659 1.00 64.57 O
ATOM 4 OP2 A A 12 14.751 -44.775 20.916 1.00 64.87 O
ATOM 5 O5' A A 12 16.994 -45.274 21.938 1.00 64.87 O
ATOM 6 C5' A A 12 17.991 -44.637 21.166 1.00 64.39 C
ATOM 7 C4' A A 12 18.572 -45.610 20.155 1.00 64.92 C
ATOM 8 O4' A A 12 19.351 -44.874 19.176 1.00 64.41 O
ATOM 9 C3' A A 12 19.512 -46.664 20.729 1.00 65.74 C
ATOM 10 O3' A A 12 19.401 -47.899 20.007 1.00 66.80 O
ATOM 11 C2' A A 12 20.877 -46.013 20.546 1.00 65.43 C
ATOM 12 O2' A A 12 21.911 -46.971 20.476 1.00 66.91 O
ATOM 13 C1' A A 12 20.693 -45.311 19.202 1.00 64.53 C
ATOM 14 N9 A A 12 21.552 -44.147 18.993 1.00 63.70 N
ATOM 15 C8 A A 12 21.671 -43.045 19.797 1.00 62.88 C
ATOM 16 N7 A A 12 22.523 -42.152 19.354 1.00 62.29 N
ATOM 17 C5 A A 12 22.997 -42.706 18.175 1.00 62.48 C
ATOM 18 C6 A A 12 23.937 -42.261 17.217 1.00 62.11 C
ATOM 19 N6 A A 12 24.588 -41.100 17.310 1.00 61.39 N
ATOM 20 N1 A A 12 24.184 -43.057 16.150 1.00 62.40 N
ATOM 21 C2 A A 12 23.537 -44.226 16.050 1.00 62.68 C
ATOM 22 N3 A A 12 22.639 -44.748 16.884 1.00 63.24 N
ATOM 23 C4 A A 12 22.409 -43.936 17.935 1.00 63.23 C
ATOM 24 P A A 13 18.505 -49.116 20.544 1.00 68.04 P
ATOM 25 OP1 A A 13 18.706 -50.280 19.653 1.00 69.04 O
ATOM 26 OP2 A A 13 17.131 -48.608 20.749 1.00 67.55 O
ATOM 27 O5' A A 13 19.203 -49.494 21.936 1.00 69.67 O
TER

ATOM 1 O3' U B 19 25.256 -48.899 16.533 1.00 67.67 O
ATOM 2 P A B 20 24.057 -49.884 16.140 1.00 67.75 P
ATOM 3 OP1 A B 20 23.210 -50.083 17.340 1.00 68.22 O
ATOM 4 OP2 A B 20 24.643 -51.062 15.456 1.00 68.87 O
ATOM 5 O5' A B 20 23.208 -49.024 15.098 1.00 65.81 O
ATOM 6 C5' A B 20 22.483 -47.893 15.547 1.00 64.78 C
ATOM 7 C4' A B 20 21.997 -47.048 14.383 1.00 64.46 C
ATOM 8 O4' A B 20 23.133 -46.493 13.668 1.00 64.24 O
ATOM 9 C3' A B 20 21.206 -47.789 13.317 1.00 65.32 C
ATOM 10 O3' A B 20 19.844 -47.892 13.703 1.00 66.63 O
ATOM 11 C2' A B 20 21.419 -46.892 12.100 1.00 64.14 C
ATOM 12 O2' A B 20 20.656 -45.703 12.118 1.00 62.66 O
ATOM 13 C1' A B 20 22.894 -46.548 12.272 1.00 64.01 C
ATOM 14 N9 A B 20 23.801 -47.528 11.678 1.00 64.61 N
ATOM 15 C8 A B 20 24.726 -48.285 12.337 1.00 65.09 C
ATOM 16 N7 A B 20 25.407 -49.085 11.558 1.00 66.37 N
ATOM 17 C5 A B 20 24.896 -48.838 10.299 1.00 65.95 C
ATOM 18 C6 A B 20 25.199 -49.374 9.030 1.00 66.77 C
ATOM 19 N6 A B 20 26.138 -50.306 8.831 1.00 67.67 N
ATOM 20 N1 A B 20 24.494 -48.914 7.971 1.00 66.86 N
ATOM 21 C2 A B 20 23.551 -47.980 8.170 1.00 66.04 C
ATOM 22 N3 A B 20 23.186 -47.399 9.313 1.00 65.24 N
ATOM 23 C4 A B 20 23.903 -47.876 10.350 1.00 65.19 C
ATOM 24 P A B 21 19.029 -49.254 13.480 1.00 68.11 P
ATOM 25 OP1 A B 21 17.638 -48.987 13.918 1.00 67.76 O
ATOM 26 OP2 A B 21 19.792 -50.365 14.095 1.00 68.82 O
ATOM 27 O5' A B 21 19.081 -49.461 11.890 1.00 68.99 O
TER

Atoms:
OP1: (15.778,-43.209,22.659)
OP2: (14.751,-44.775,20.916)
C3': (19.512,-46.664,20.729)
C1': (20.693,-45.311,19.202)
C5': (17.991,-44.637,21.166)
O4': (19.351,-44.874,19.176)
C8: (21.671,-43.045,19.797)
O2': (21.911,-46.971,20.476)
C6: (23.937,-42.261,17.217)
C5: (22.997,-42.706,18.175)
C4: (22.409,-43.936,17.935)
P: (15.568,-44.579,22.140)
C4': (18.572,-45.610,20.155)
C2': (20.877,-46.013,20.546)
C2: (23.537,-44.226,16.050)
N1: (24.184,-43.057,16.150)
N3: (22.639,-44.748,16.884)
N6: (24.588,-41.100,17.310)
N7: (22.523,-42.152,19.354)
N9: (21.552,-44.147,18.993)
O5': (16.994,-45.274,21.938)
O3': (19.401,-47.899,20.007)
OP1: (23.210,-50.083,17.340)
OP2: (24.643,-51.062,15.456)
C3': (21.206,-47.789,13.317)
C1': (22.894,-46.548,12.272)
C5': (22.483,-47.893,15.547)
O4': (23.133,-46.493,13.668)
C8: (24.726,-48.285,12.337)
O2': (20.656,-45.703,12.118)
C6: (25.199,-49.374,9.030)
C5: (24.896,-48.838,10.299)
C4: (23.903,-47.876,10.350)
P: (24.057,-49.884,16.140)
C4': (21.997,-47.048,14.383)
C2': (21.419,-46.892,12.100)
C2: (23.551,-47.980,8.170)
N1: (24.494,-48.914,7.971)
N3: (23.186,-47.399,9.313)
N6: (26.138,-50.306,8.831)
N7: (25.407,-49.085,11.558)
N9: (23.801,-47.528,11.678)
O5': (23.208,-49.024,15.098)
O3': (19.844,-47.892,13.703)
Image (generated by PyMOL):
PyMOL image
show in jmol