Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1115:A1178
Extra
PDB:
ATOM 1 O3' U A1114 -143.116 60.439 5.633 1.00 32.71 O
ATOM 2 P A A1115 -143.952 61.796 5.825 1.00 35.88 P
ATOM 3 OP1 A A1115 -145.085 61.480 6.715 1.00 35.88 O
ATOM 4 OP2 A A1115 -144.231 62.343 4.469 1.00 35.88 O
ATOM 5 O5' A A1115 -142.929 62.728 6.587 1.00 35.88 O
ATOM 6 C5' A A1115 -142.623 62.469 7.938 1.00 35.88 C
ATOM 7 C4' A A1115 -141.440 63.266 8.398 1.00 35.88 C
ATOM 8 O4' A A1115 -140.292 62.998 7.558 1.00 35.88 O
ATOM 9 C3' A A1115 -141.586 64.763 8.328 1.00 35.88 C
ATOM 10 O3' A A1115 -142.388 65.275 9.364 1.00 35.88 O
ATOM 11 C2' A A1115 -140.137 65.232 8.373 1.00 35.88 C
ATOM 12 O2' A A1115 -139.648 65.264 9.710 1.00 35.88 O
ATOM 13 C1' A A1115 -139.427 64.108 7.596 1.00 35.88 C
ATOM 14 N9 A A1115 -139.115 64.508 6.221 1.00 36.07 N
ATOM 15 C8 A A1115 -139.896 64.425 5.099 1.00 36.07 C
ATOM 16 N7 A A1115 -139.293 64.903 4.030 1.00 36.07 N
ATOM 17 C5 A A1115 -138.046 65.326 4.493 1.00 36.07 C
ATOM 18 C6 A A1115 -136.935 65.921 3.866 1.00 36.07 C
ATOM 19 N6 A A1115 -136.869 66.232 2.564 1.00 36.07 N
ATOM 20 N1 A A1115 -135.863 66.195 4.646 1.00 36.07 N
ATOM 21 C2 A A1115 -135.893 65.901 5.952 1.00 36.07 C
ATOM 22 N3 A A1115 -136.875 65.346 6.648 1.00 36.07 N
ATOM 23 C4 A A1115 -137.928 65.082 5.848 1.00 36.07 C
ATOM 24 P U A1116 -143.903 65.704 9.057 1.00 43.03 P
ATOM 25 OP1 U A1116 -144.778 64.742 9.783 1.00 43.03 O
ATOM 26 OP2 U A1116 -144.035 65.824 7.583 1.00 43.03 O
ATOM 27 O5' U A1116 -144.000 67.152 9.718 1.00 43.03 O
TER
ATOM 1 O3' A B1177 -136.626 68.953 14.259 1.00 41.82 O
ATOM 2 P A B1178 -135.054 69.221 14.418 1.00 54.77 P
ATOM 3 OP1 A B1178 -134.626 68.563 15.675 1.00 54.77 O
ATOM 4 OP2 A B1178 -134.844 70.679 14.272 1.00 54.77 O
ATOM 5 O5' A B1178 -134.433 68.466 13.159 1.00 54.77 O
ATOM 6 C5' A B1178 -134.826 67.142 12.830 1.00 54.77 C
ATOM 7 C4' A B1178 -134.658 66.864 11.354 1.00 54.77 C
ATOM 8 O4' A B1178 -135.423 67.825 10.585 1.00 54.77 O
ATOM 9 C3' A B1178 -133.241 66.982 10.800 1.00 54.77 C
ATOM 10 O3' A B1178 -132.455 65.823 11.038 1.00 54.77 O
ATOM 11 C2' A B1178 -133.476 67.267 9.318 1.00 54.77 C
ATOM 12 O2' A B1178 -133.692 66.060 8.596 1.00 54.77 O
ATOM 13 C1' A B1178 -134.788 68.066 9.347 1.00 54.77 C
ATOM 14 N9 A B1178 -134.576 69.523 9.192 1.00 53.47 N
ATOM 15 C8 A B1178 -134.669 70.507 10.144 1.00 53.47 C
ATOM 16 N7 A B1178 -134.443 71.707 9.671 1.00 53.47 N
ATOM 17 C5 A B1178 -134.190 71.503 8.325 1.00 53.47 C
ATOM 18 C6 A B1178 -133.871 72.380 7.271 1.00 53.47 C
ATOM 19 N6 A B1178 -133.752 73.703 7.433 1.00 53.47 N
ATOM 20 N1 A B1178 -133.676 71.852 6.037 1.00 53.47 N
ATOM 21 C2 A B1178 -133.798 70.529 5.891 1.00 53.47 C
ATOM 22 N3 A B1178 -134.092 69.609 6.805 1.00 53.47 N
ATOM 23 C4 A B1178 -134.278 70.165 8.013 1.00 53.47 C
ATOM 24 P G B1179 -131.285 65.854 12.141 1.00 58.42 P
ATOM 25 OP1 G B1179 -130.458 64.644 11.942 1.00 58.42 O
ATOM 26 OP2 G B1179 -131.921 66.074 13.464 1.00 58.42 O
ATOM 27 O5' G B1179 -130.456 67.133 11.726 1.00 58.42 O
TER
ATOM 2 P A A1115 -143.952 61.796 5.825 1.00 35.88 P
ATOM 3 OP1 A A1115 -145.085 61.480 6.715 1.00 35.88 O
ATOM 4 OP2 A A1115 -144.231 62.343 4.469 1.00 35.88 O
ATOM 5 O5' A A1115 -142.929 62.728 6.587 1.00 35.88 O
ATOM 6 C5' A A1115 -142.623 62.469 7.938 1.00 35.88 C
ATOM 7 C4' A A1115 -141.440 63.266 8.398 1.00 35.88 C
ATOM 8 O4' A A1115 -140.292 62.998 7.558 1.00 35.88 O
ATOM 9 C3' A A1115 -141.586 64.763 8.328 1.00 35.88 C
ATOM 10 O3' A A1115 -142.388 65.275 9.364 1.00 35.88 O
ATOM 11 C2' A A1115 -140.137 65.232 8.373 1.00 35.88 C
ATOM 12 O2' A A1115 -139.648 65.264 9.710 1.00 35.88 O
ATOM 13 C1' A A1115 -139.427 64.108 7.596 1.00 35.88 C
ATOM 14 N9 A A1115 -139.115 64.508 6.221 1.00 36.07 N
ATOM 15 C8 A A1115 -139.896 64.425 5.099 1.00 36.07 C
ATOM 16 N7 A A1115 -139.293 64.903 4.030 1.00 36.07 N
ATOM 17 C5 A A1115 -138.046 65.326 4.493 1.00 36.07 C
ATOM 18 C6 A A1115 -136.935 65.921 3.866 1.00 36.07 C
ATOM 19 N6 A A1115 -136.869 66.232 2.564 1.00 36.07 N
ATOM 20 N1 A A1115 -135.863 66.195 4.646 1.00 36.07 N
ATOM 21 C2 A A1115 -135.893 65.901 5.952 1.00 36.07 C
ATOM 22 N3 A A1115 -136.875 65.346 6.648 1.00 36.07 N
ATOM 23 C4 A A1115 -137.928 65.082 5.848 1.00 36.07 C
ATOM 24 P U A1116 -143.903 65.704 9.057 1.00 43.03 P
ATOM 25 OP1 U A1116 -144.778 64.742 9.783 1.00 43.03 O
ATOM 26 OP2 U A1116 -144.035 65.824 7.583 1.00 43.03 O
ATOM 27 O5' U A1116 -144.000 67.152 9.718 1.00 43.03 O
TER
ATOM 1 O3' A B1177 -136.626 68.953 14.259 1.00 41.82 O
ATOM 2 P A B1178 -135.054 69.221 14.418 1.00 54.77 P
ATOM 3 OP1 A B1178 -134.626 68.563 15.675 1.00 54.77 O
ATOM 4 OP2 A B1178 -134.844 70.679 14.272 1.00 54.77 O
ATOM 5 O5' A B1178 -134.433 68.466 13.159 1.00 54.77 O
ATOM 6 C5' A B1178 -134.826 67.142 12.830 1.00 54.77 C
ATOM 7 C4' A B1178 -134.658 66.864 11.354 1.00 54.77 C
ATOM 8 O4' A B1178 -135.423 67.825 10.585 1.00 54.77 O
ATOM 9 C3' A B1178 -133.241 66.982 10.800 1.00 54.77 C
ATOM 10 O3' A B1178 -132.455 65.823 11.038 1.00 54.77 O
ATOM 11 C2' A B1178 -133.476 67.267 9.318 1.00 54.77 C
ATOM 12 O2' A B1178 -133.692 66.060 8.596 1.00 54.77 O
ATOM 13 C1' A B1178 -134.788 68.066 9.347 1.00 54.77 C
ATOM 14 N9 A B1178 -134.576 69.523 9.192 1.00 53.47 N
ATOM 15 C8 A B1178 -134.669 70.507 10.144 1.00 53.47 C
ATOM 16 N7 A B1178 -134.443 71.707 9.671 1.00 53.47 N
ATOM 17 C5 A B1178 -134.190 71.503 8.325 1.00 53.47 C
ATOM 18 C6 A B1178 -133.871 72.380 7.271 1.00 53.47 C
ATOM 19 N6 A B1178 -133.752 73.703 7.433 1.00 53.47 N
ATOM 20 N1 A B1178 -133.676 71.852 6.037 1.00 53.47 N
ATOM 21 C2 A B1178 -133.798 70.529 5.891 1.00 53.47 C
ATOM 22 N3 A B1178 -134.092 69.609 6.805 1.00 53.47 N
ATOM 23 C4 A B1178 -134.278 70.165 8.013 1.00 53.47 C
ATOM 24 P G B1179 -131.285 65.854 12.141 1.00 58.42 P
ATOM 25 OP1 G B1179 -130.458 64.644 11.942 1.00 58.42 O
ATOM 26 OP2 G B1179 -131.921 66.074 13.464 1.00 58.42 O
ATOM 27 O5' G B1179 -130.456 67.133 11.726 1.00 58.42 O
TER
Atoms:
OP1: (-145.085,61.480,6.715)
OP2: (-144.231,62.343,4.469)
C3': (-141.586,64.763,8.328)
C1': (-139.427,64.108,7.596)
C5': (-142.623,62.469,7.938)
O4': (-140.292,62.998,7.558)
C8: (-139.896,64.425,5.099)
O2': (-139.648,65.264,9.710)
C6: (-136.935,65.921,3.866)
C5: (-138.046,65.326,4.493)
C4: (-137.928,65.082,5.848)
P: (-143.952,61.796,5.825)
C4': (-141.440,63.266,8.398)
C2': (-140.137,65.232,8.373)
C2: (-135.893,65.901,5.952)
N1: (-135.863,66.195,4.646)
N3: (-136.875,65.346,6.648)
N6: (-136.869,66.232,2.564)
N7: (-139.293,64.903,4.030)
N9: (-139.115,64.508,6.221)
O5': (-142.929,62.728,6.587)
O3': (-142.388,65.275,9.364)
OP2: (-144.231,62.343,4.469)
C3': (-141.586,64.763,8.328)
C1': (-139.427,64.108,7.596)
C5': (-142.623,62.469,7.938)
O4': (-140.292,62.998,7.558)
C8: (-139.896,64.425,5.099)
O2': (-139.648,65.264,9.710)
C6: (-136.935,65.921,3.866)
C5: (-138.046,65.326,4.493)
C4: (-137.928,65.082,5.848)
P: (-143.952,61.796,5.825)
C4': (-141.440,63.266,8.398)
C2': (-140.137,65.232,8.373)
C2: (-135.893,65.901,5.952)
N1: (-135.863,66.195,4.646)
N3: (-136.875,65.346,6.648)
N6: (-136.869,66.232,2.564)
N7: (-139.293,64.903,4.030)
N9: (-139.115,64.508,6.221)
O5': (-142.929,62.728,6.587)
O3': (-142.388,65.275,9.364)
OP1: (-134.626,68.563,15.675)
OP2: (-134.844,70.679,14.272)
C3': (-133.241,66.982,10.800)
C1': (-134.788,68.066,9.347)
C5': (-134.826,67.142,12.830)
O4': (-135.423,67.825,10.585)
C8: (-134.669,70.507,10.144)
O2': (-133.692,66.060,8.596)
C6: (-133.871,72.380,7.271)
C5: (-134.190,71.503,8.325)
C4: (-134.278,70.165,8.013)
P: (-135.054,69.221,14.418)
C4': (-134.658,66.864,11.354)
C2': (-133.476,67.267,9.318)
C2: (-133.798,70.529,5.891)
N1: (-133.676,71.852,6.037)
N3: (-134.092,69.609,6.805)
N6: (-133.752,73.703,7.433)
N7: (-134.443,71.707,9.671)
N9: (-134.576,69.523,9.192)
O5': (-134.433,68.466,13.159)
O3': (-132.455,65.823,11.038)
OP2: (-134.844,70.679,14.272)
C3': (-133.241,66.982,10.800)
C1': (-134.788,68.066,9.347)
C5': (-134.826,67.142,12.830)
O4': (-135.423,67.825,10.585)
C8: (-134.669,70.507,10.144)
O2': (-133.692,66.060,8.596)
C6: (-133.871,72.380,7.271)
C5: (-134.190,71.503,8.325)
C4: (-134.278,70.165,8.013)
P: (-135.054,69.221,14.418)
C4': (-134.658,66.864,11.354)
C2': (-133.476,67.267,9.318)
C2: (-133.798,70.529,5.891)
N1: (-133.676,71.852,6.037)
N3: (-134.092,69.609,6.805)
N6: (-133.752,73.703,7.433)
N7: (-134.443,71.707,9.671)
N9: (-134.576,69.523,9.192)
O5': (-134.433,68.466,13.159)
O3': (-132.455,65.823,11.038)
Image (generated by PyMOL):